RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Exosc5Q9CRA8 235 aa13.8□□□□□ -0.2
Nup54-201ENSMUST00000038514 Abcb10Q9JI39 715 aa13.8□□□□□ -0.2
Nup54-201ENSMUST00000038514 Fgf21Q9JJN1 210 aa13.8□□□□□ -0.2
Nup54-201ENSMUST00000038514 Dapp1Q9QXT1 280 aa13.8□□□□□ -0.2
Nup54-201ENSMUST00000038514 Lrrk1Q3UHC2 2014 aa13.8□□□□□ -0.2
Nup54-201ENSMUST00000038514 Igkv12-38A0A0G2JEI7 115 aa13.8□□□□□ -0.2
Nup54-201ENSMUST00000038514 Vmn2r108E9PYS0 855 aa13.8□□□□□ -0.2
Nup54-201ENSMUST00000038514 Cxcl5P50228 132 aa13.8□□□□□ -0.2
Nup54-201ENSMUST00000038514 Nhlrc4Q3UP44 136 aa13.8□□□□□ -0.2
Nup54-201ENSMUST00000038514 H2-Eb2Q3UUV9 287 aa13.8□□□□□ -0.2
Nup54-201ENSMUST00000038514 EdnraQ61614 427 aa13.8□□□□□ -0.2
Nup54-201ENSMUST00000038514 Mvb12aQ78HU3 271 aa13.8□□□□□ -0.2
Nup54-201ENSMUST00000038514 HeltQ7TS99 240 aa13.8□□□□□ -0.2
Nup54-201ENSMUST00000038514 Otop1Q80VM9 600 aa13.8□□□□□ -0.2
Nup54-201ENSMUST00000038514 Tmem222Q8BVA2 208 aa13.8□□□□□ -0.2
Nup54-201ENSMUST00000038514 Rbm34Q8C5L7 375 aaKnown RBP13.8□□□□□ -0.2
Nup54-201ENSMUST00000038514 Amdhd2Q8JZV7 409 aa13.8□□□□□ -0.2
Nup54-201ENSMUST00000038514 Fam199xQ8K2D0 388 aa13.8□□□□□ -0.2
Nup54-201ENSMUST00000038514 Nkd2Q8VE28 461 aa13.8□□□□□ -0.2
Nup54-201ENSMUST00000038514 B3galnt1Q920V1 331 aa13.8□□□□□ -0.2
Nup54-201ENSMUST00000038514 Arv1Q9D0U9 266 aa13.8□□□□□ -0.2
Nup54-201ENSMUST00000038514 Susd3Q9D176 269 aa13.8□□□□□ -0.2
Nup54-201ENSMUST00000038514 Keg1Q9DCY0 295 aa13.8□□□□□ -0.2
Nup54-201ENSMUST00000038514 Fzd2Q9JIP6 570 aa13.8□□□□□ -0.2
Nup54-201ENSMUST00000038514 Cnot9Q9JKY0 299 aa13.8□□□□□ -0.2
Nup54-201ENSMUST00000038514 Col4a2P08122 1707 aa13.79□□□□□ -0.2
Nup54-201ENSMUST00000038514 Igkv12-44A0A140T8M2 115 aa13.79□□□□□ -0.2
Nup54-201ENSMUST00000038514 Olfr1193A2AV13 318 aa13.79□□□□□ -0.2
Nup54-201ENSMUST00000038514 Scml2B1AVB3 969 aa13.79□□□□□ -0.2
Nup54-201ENSMUST00000038514 Gm5799E9Q2M1 201 aa13.79□□□□□ -0.2
Nup54-201ENSMUST00000038514 Zfp707F6QUN2 391 aa13.79□□□□□ -0.2
Nup54-201ENSMUST00000038514 Pcdh12O55134 1180 aa13.79□□□□□ -0.2
Nup54-201ENSMUST00000038514 Hsd17b12O70503 312 aa13.79□□□□□ -0.2
Nup54-201ENSMUST00000038514 C4bpaP08607 469 aa13.79□□□□□ -0.2
Nup54-201ENSMUST00000038514 Cd48P18181 240 aa13.79□□□□□ -0.2
Nup54-201ENSMUST00000038514 Cnn2Q08093 305 aa13.79□□□□□ -0.2
Nup54-201ENSMUST00000038514 Mier2Q3U3N0 541 aa13.79□□□□□ -0.2
Nup54-201ENSMUST00000038514 Nkx6-3Q3UHX8 262 aa13.79□□□□□ -0.2
Nup54-201ENSMUST00000038514 Grxcr1Q50H32 290 aa13.79□□□□□ -0.2
Nup54-201ENSMUST00000038514 Znf488Q5HZG9 337 aa13.79□□□□□ -0.2
Nup54-201ENSMUST00000038514 Foxd3Q61060 465 aa13.79□□□□□ -0.2
Nup54-201ENSMUST00000038514 Azgp1Q64726 307 aa13.79□□□□□ -0.2
Nup54-201ENSMUST00000038514 Gm5346Q7M766 736 aa13.79□□□□□ -0.2
Nup54-201ENSMUST00000038514 Glrx5Q80Y14 152 aa13.79□□□□□ -0.2
Nup54-201ENSMUST00000038514 Csnk1g2Q8BVP5 415 aa13.79□□□□□ -0.2
Nup54-201ENSMUST00000038514 Tns4Q8BZ33 696 aa13.79□□□□□ -0.2
Nup54-201ENSMUST00000038514 Slc25a45Q8CFJ7 288 aa13.79□□□□□ -0.2
Nup54-201ENSMUST00000038514 Gramd1cQ8CI52 457 aa13.79□□□□□ -0.2
Nup54-201ENSMUST00000038514 Gpr18Q8K1Z6 331 aa13.79□□□□□ -0.2
Nup54-201ENSMUST00000038514 Odf4Q8VI88 290 aa13.79□□□□□ -0.2
Nup54-201ENSMUST00000038514 Uxs1Q91XL3 420 aa13.79□□□□□ -0.2
Nup54-201ENSMUST00000038514 Sfxn1Q99JR1 322 aa13.79□□□□□ -0.2
Nup54-201ENSMUST00000038514 PtgfrnQ9WV91 879 aa13.79□□□□□ -0.2
Nup54-201ENSMUST00000038514 Minpp1Q9Z2L6 481 aa13.79□□□□□ -0.2
Nup54-201ENSMUST00000038514 Olfr1223A0A1L1SU13 311 aa13.79□□□□□ -0.2
Nup54-201ENSMUST00000038514 Lao1B1ARV3 523 aa13.79□□□□□ -0.2
Nup54-201ENSMUST00000038514 PhyhO35386 338 aa13.79□□□□□ -0.2
Nup54-201ENSMUST00000038514 Cops3O88543 423 aa13.79□□□□□ -0.2
Nup54-201ENSMUST00000038514 P01851 173 aa13.79□□□□□ -0.2
Nup54-201ENSMUST00000038514 P01852 173 aa13.79□□□□□ -0.2
Nup54-201ENSMUST00000038514 PrkcaP20444 672 aa13.79□□□□□ -0.2
Nup54-201ENSMUST00000038514 AhrP30561 848 aa13.79□□□□□ -0.2
Nup54-201ENSMUST00000038514 FahP35505 419 aa13.79□□□□□ -0.2
Nup54-201ENSMUST00000038514 Nat2P50295 290 aa13.79□□□□□ -0.2
Nup54-201ENSMUST00000038514 Acta2P62737 377 aaKnown RBP13.79□□□□□ -0.2
Nup54-201ENSMUST00000038514 Actg2P63268 376 aa13.79□□□□□ -0.2
Nup54-201ENSMUST00000038514 Rgs16P97428 201 aa13.79□□□□□ -0.2
Nup54-201ENSMUST00000038514 Epha4Q03137 986 aa13.79□□□□□ -0.2
Nup54-201ENSMUST00000038514 Msto1Q2YDW2 556 aa13.79□□□□□ -0.2
Nup54-201ENSMUST00000038514 D17Wsu92eQ3TT38 291 aa13.79□□□□□ -0.2
Nup54-201ENSMUST00000038514 Alg11Q3TZM9 492 aa13.79□□□□□ -0.2
Nup54-201ENSMUST00000038514 Garem1Q3UFT3 876 aa13.79□□□□□ -0.2
Nup54-201ENSMUST00000038514 Obox3Q3UT54 335 aa13.79□□□□□ -0.2
Nup54-201ENSMUST00000038514 Ankrd37Q569N2 159 aa13.79□□□□□ -0.2
Nup54-201ENSMUST00000038514 Slitrk2Q810C0 846 aa13.79□□□□□ -0.2
Nup54-201ENSMUST00000038514 Cep68Q8C0D9 733 aa13.79□□□□□ -0.2
Nup54-201ENSMUST00000038514 Grhl2Q8K5C0 625 aa13.79□□□□□ -0.2
Nup54-201ENSMUST00000038514 Q8R2K8 148 aa13.79□□□□□ -0.2
Nup54-201ENSMUST00000038514 Olfr1176Q8VG40 315 aa13.79□□□□□ -0.2
Nup54-201ENSMUST00000038514 Vmn1r85Q8VIB8 308 aa13.79□□□□□ -0.2
Nup54-201ENSMUST00000038514 Smarcd2Q99JR8 531 aaKnown RBP13.79□□□□□ -0.2
Nup54-201ENSMUST00000038514 Lman2Q9DBH5 358 aaKnown RBP13.79□□□□□ -0.2
Nup54-201ENSMUST00000038514 Mmp1bQ9EPL6 463 aa13.79□□□□□ -0.2
Nup54-201ENSMUST00000038514 Slc39a1Q9QZ03 324 aa13.79□□□□□ -0.2
Nup54-201ENSMUST00000038514 Sema4fQ9Z123 777 aa13.79□□□□□ -0.2
Nup54-201ENSMUST00000038514 Crybg1A0A0G2JG52 2065 aa13.78□□□□□ -0.2
Nup54-201ENSMUST00000038514 Kiaa0100Q5SYL3 2234 aa13.78□□□□□ -0.2
Nup54-201ENSMUST00000038514 Gm14418A2ARR6 358 aa13.78□□□□□ -0.2
Nup54-201ENSMUST00000038514 Gm14322A2AW66 358 aa13.78□□□□□ -0.2
Nup54-201ENSMUST00000038514 4930467E23RikD3Z1P8 350 aa13.78□□□□□ -0.2
Nup54-201ENSMUST00000038514 Olfr610E9Q598 315 aa13.78□□□□□ -0.2
Nup54-201ENSMUST00000038514 Gm15319E9Q637 350 aa13.78□□□□□ -0.2
Nup54-201ENSMUST00000038514 Gm9493F6SVV1 192 aaKnown RBP13.78□□□□□ -0.2
Nup54-201ENSMUST00000038514 Olfr1221L7MU53 311 aa13.78□□□□□ -0.2
Nup54-201ENSMUST00000038514 Fbxw15L7N1X6 466 aa13.78□□□□□ -0.2
Nup54-201ENSMUST00000038514 Nipsnap1O55125 284 aa13.78□□□□□ -0.2
Nup54-201ENSMUST00000038514 Ifi204P0DOV2 619 aa13.78□□□□□ -0.2
Nup54-201ENSMUST00000038514 Zp3P10761 424 aa13.78□□□□□ -0.2
Nup54-201ENSMUST00000038514 Pou3f1P21952 449 aa13.78□□□□□ -0.2
Nup54-201ENSMUST00000038514 Cd28P31041 218 aa13.78□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 28.1 ms