RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Ndufb6Q3UIU2 128 aa12.38□□□□□ -0.43
Nup88-201ENSMUST00000035283 Dnaaf3Q3UYV8 586 aa12.38□□□□□ -0.43
Nup88-201ENSMUST00000035283 Ppp5cQ60676 499 aa12.38□□□□□ -0.43
Nup88-201ENSMUST00000035283 Ltc4sQ60860 150 aa12.38□□□□□ -0.43
Nup88-201ENSMUST00000035283 CishQ62225 257 aa12.38□□□□□ -0.43
Nup88-201ENSMUST00000035283 Klhl6Q6V595 619 aa12.38□□□□□ -0.43
Nup88-201ENSMUST00000035283 Pcdh19Q80TF3 1145 aa12.38□□□□□ -0.43
Nup88-201ENSMUST00000035283 Asphd2Q80VP9 343 aa12.38□□□□□ -0.43
Nup88-201ENSMUST00000035283 Mettl7a1Q8C6B0 244 aa12.38□□□□□ -0.43
Nup88-201ENSMUST00000035283 Rab43Q8CG50 210 aa12.38□□□□□ -0.43
Nup88-201ENSMUST00000035283 Mtnr1bQ8CIQ6 364 aa12.38□□□□□ -0.43
Nup88-201ENSMUST00000035283 Tmem185bQ8R3R5 350 aa12.38□□□□□ -0.43
Nup88-201ENSMUST00000035283 Olfr518Q8VEW1 333 aa12.38□□□□□ -0.43
Nup88-201ENSMUST00000035283 Olfr1312Q8VF10 317 aa12.38□□□□□ -0.43
Nup88-201ENSMUST00000035283 Itfg2Q91WI7 443 aa12.38□□□□□ -0.43
Nup88-201ENSMUST00000035283 Mrgpra1Q91WW5 304 aa12.38□□□□□ -0.43
Nup88-201ENSMUST00000035283 Dyrk3Q922Y0 586 aa12.38□□□□□ -0.43
Nup88-201ENSMUST00000035283 RragcQ99K70 398 aa12.38□□□□□ -0.43
Nup88-201ENSMUST00000035283 Tpra1Q99MU1 369 aa12.38□□□□□ -0.43
Nup88-201ENSMUST00000035283 Acss1Q99NB1 682 aa12.38□□□□□ -0.43
Nup88-201ENSMUST00000035283 Q9CQT6 229 aa12.38□□□□□ -0.43
Nup88-201ENSMUST00000035283 Actr6Q9D864 396 aa12.38□□□□□ -0.43
Nup88-201ENSMUST00000035283 Slc9a3r2Q9JHL1 337 aa12.38□□□□□ -0.43
Nup88-201ENSMUST00000035283 Ttc39aA2ACP1 578 aa12.37□□□□□ -0.43
Nup88-201ENSMUST00000035283 Olfr1055A2AVX9 346 aa12.37□□□□□ -0.43
Nup88-201ENSMUST00000035283 B3galt2O54905 422 aa12.37□□□□□ -0.43
Nup88-201ENSMUST00000035283 P01635 115 aa12.37□□□□□ -0.43
Nup88-201ENSMUST00000035283 P01809 118 aa12.37□□□□□ -0.43
Nup88-201ENSMUST00000035283 Efnb1P52795 345 aa12.37□□□□□ -0.43
Nup88-201ENSMUST00000035283 4933415F23RikQ14BX6 153 aa12.37□□□□□ -0.43
Nup88-201ENSMUST00000035283 Ttyh2Q3TH73 532 aa12.37□□□□□ -0.43
Nup88-201ENSMUST00000035283 Adam9Q61072 845 aa12.37□□□□□ -0.43
Nup88-201ENSMUST00000035283 ShbQ6PD21 503 aa12.37□□□□□ -0.43
Nup88-201ENSMUST00000035283 Olfr198Q7TS40 306 aa12.37□□□□□ -0.43
Nup88-201ENSMUST00000035283 Ube2q1Q7TSS2 422 aa12.37□□□□□ -0.43
Nup88-201ENSMUST00000035283 JamlQ80UL9 379 aa12.37□□□□□ -0.43
Nup88-201ENSMUST00000035283 Mrps7Q80X85 242 aaKnown RBP12.37□□□□□ -0.43
Nup88-201ENSMUST00000035283 Tnfsfm13Q8BXS2 410 aa12.37□□□□□ -0.43
Nup88-201ENSMUST00000035283 Vmn1r59Q8R2B9 310 aa12.37□□□□□ -0.43
Nup88-201ENSMUST00000035283 Slc22a6Q8VC69 545 aa12.37□□□□□ -0.43
Nup88-201ENSMUST00000035283 SgtbQ8VD33 304 aa12.37□□□□□ -0.43
Nup88-201ENSMUST00000035283 Nkd2Q8VE28 461 aa12.37□□□□□ -0.43
Nup88-201ENSMUST00000035283 Olfr1504Q8VFQ4 315 aa12.37□□□□□ -0.43
Nup88-201ENSMUST00000035283 Fam118aQ91YN1 357 aa12.37□□□□□ -0.43
Nup88-201ENSMUST00000035283 Mrpl37Q921S7 423 aaKnown RBP12.37□□□□□ -0.43
Nup88-201ENSMUST00000035283 Tktl1Q99MX0 595 aa12.37□□□□□ -0.43
Nup88-201ENSMUST00000035283 Q9CQF4 240 aa12.37□□□□□ -0.43
Nup88-201ENSMUST00000035283 Med31Q9CXU1 131 aaKnown RBP12.37□□□□□ -0.43
Nup88-201ENSMUST00000035283 Obp1aQ9D3H2 163 aa12.37□□□□□ -0.43
Nup88-201ENSMUST00000035283 Q9D8N1 392 aa12.37□□□□□ -0.43
Nup88-201ENSMUST00000035283 Tex44Q9DA60 530 aa12.37□□□□□ -0.43
Nup88-201ENSMUST00000035283 NsdhlQ9R1J0 362 aa12.37□□□□□ -0.43
Nup88-201ENSMUST00000035283 Lao1B1ARV3 523 aa12.37□□□□□ -0.43
Nup88-201ENSMUST00000035283 Olfr173E9QAT7 321 aa12.37□□□□□ -0.43
Nup88-201ENSMUST00000035283 Cops3O88543 423 aa12.37□□□□□ -0.43
Nup88-201ENSMUST00000035283 P03976 113 aa12.37□□□□□ -0.43
Nup88-201ENSMUST00000035283 CtslP06797 334 aa12.37□□□□□ -0.43
Nup88-201ENSMUST00000035283 AcheP21836 614 aa12.37□□□□□ -0.43
Nup88-201ENSMUST00000035283 Ddx6P54823 483 aaKnown RBP12.37□□□□□ -0.43
Nup88-201ENSMUST00000035283 Tgif1P70284 272 aa12.37□□□□□ -0.43
Nup88-201ENSMUST00000035283 Bcl2a1bQ497M6 172 aa12.37□□□□□ -0.43
Nup88-201ENSMUST00000035283 Ube2j2Q6P073 259 aa12.37□□□□□ -0.43
Nup88-201ENSMUST00000035283 Lrit2Q6PFC5 549 aa12.37□□□□□ -0.43
Nup88-201ENSMUST00000035283 Gm5346Q7M766 736 aa12.37□□□□□ -0.43
Nup88-201ENSMUST00000035283 Olfr1463Q7TQR3 310 aa12.37□□□□□ -0.43
Nup88-201ENSMUST00000035283 Dsg1cQ7TSF0 911 aa12.37□□□□□ -0.43
Nup88-201ENSMUST00000035283 Slc30a8Q8BGG0 367 aa12.37□□□□□ -0.43
Nup88-201ENSMUST00000035283 Phf21bQ8C966 487 aa12.37□□□□□ -0.43
Nup88-201ENSMUST00000035283 Gfm1Q8K0D5 751 aaKnown RBP12.37□□□□□ -0.43
Nup88-201ENSMUST00000035283 Esrp2Q8K0G8 717 aaKnown RBP12.37□□□□□ -0.43
Nup88-201ENSMUST00000035283 Olfr781Q8VFZ8 311 aa12.37□□□□□ -0.43
Nup88-201ENSMUST00000035283 Olfr1351Q8VGU6 319 aa12.37□□□□□ -0.43
Nup88-201ENSMUST00000035283 TMEM121BQ99MX7 572 aa12.37□□□□□ -0.43
Nup88-201ENSMUST00000035283 4930447A16RikQ9D5F6 132 aa12.37□□□□□ -0.43
Nup88-201ENSMUST00000035283 Cnot9Q9JKY0 299 aa12.37□□□□□ -0.43
Nup88-201ENSMUST00000035283 Kiaa0100Q5SYL3 2234 aa12.37□□□□□ -0.43
Nup88-201ENSMUST00000035283 Gm21149A0A0G2JFY7 255 aa12.36□□□□□ -0.43
Nup88-201ENSMUST00000035283 Gm34653A0A1L1SR01 368 aa12.36□□□□□ -0.43
Nup88-201ENSMUST00000035283 Gm14418A2ARR6 358 aa12.36□□□□□ -0.43
Nup88-201ENSMUST00000035283 Gm14322A2AW66 358 aa12.36□□□□□ -0.43
Nup88-201ENSMUST00000035283 Tomm5B1AXP6 51 aa12.36□□□□□ -0.43
Nup88-201ENSMUST00000035283 SrsxB2RZI1 361 aa12.36□□□□□ -0.43
Nup88-201ENSMUST00000035283 SelenonD3Z2R5 557 aa12.36□□□□□ -0.43
Nup88-201ENSMUST00000035283 Btbd2E9PUS2 523 aa12.36□□□□□ -0.43
Nup88-201ENSMUST00000035283 Gm8857L7N291 182 aa12.36□□□□□ -0.43
Nup88-201ENSMUST00000035283 Hsd3b6O35469 373 aa12.36□□□□□ -0.43
Nup88-201ENSMUST00000035283 Spi1P17433 272 aa12.36□□□□□ -0.43
Nup88-201ENSMUST00000035283 Mat2aQ3THS6 395 aaKnown RBP12.36□□□□□ -0.43
Nup88-201ENSMUST00000035283 Enpp3Q6DYE8 874 aa12.36□□□□□ -0.43
Nup88-201ENSMUST00000035283 Lcn12Q6JVL5 193 aa12.36□□□□□ -0.43
Nup88-201ENSMUST00000035283 Eci3Q78JN3 317 aa12.36□□□□□ -0.43
Nup88-201ENSMUST00000035283 Fbxo34Q80XI1 695 aa12.36□□□□□ -0.43
Nup88-201ENSMUST00000035283 Bdh1Q80XN0 343 aa12.36□□□□□ -0.43
Nup88-201ENSMUST00000035283 Adam29Q811Q4 763 aa12.36□□□□□ -0.43
Nup88-201ENSMUST00000035283 Flrt3Q8BGT1 649 aa12.36□□□□□ -0.43
Nup88-201ENSMUST00000035283 Tmem222Q8BVA2 208 aa12.36□□□□□ -0.43
Nup88-201ENSMUST00000035283 Apoa5Q8C7G5 368 aa12.36□□□□□ -0.43
Nup88-201ENSMUST00000035283 Cdhr1Q8VHP6 859 aa12.36□□□□□ -0.43
Nup88-201ENSMUST00000035283 Clec2dQ91V08 207 aa12.36□□□□□ -0.43
Nup88-201ENSMUST00000035283 Mrgprb3Q91ZC1 312 aa12.36□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 43.7 ms