RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 ZNF544Q6NX49 715 aa15.42■□□□□ 0.06
PHGDH-229ENST00000641891 C16orf47Q6ZP98 133 aaPredicted RBP15.42■□□□□ 0.06
PHGDH-229ENST00000641891 MS4A15Q8N5U1 240 aa15.42■□□□□ 0.06
PHGDH-229ENST00000641891 EXD3Q8N9H8 876 aa15.42■□□□□ 0.06
PHGDH-229ENST00000641891 OIT3Q8WWZ8 545 aa15.42■□□□□ 0.06
PHGDH-229ENST00000641891 TSPAN32Q96QS1 320 aa15.42■□□□□ 0.06
PHGDH-229ENST00000641891 OR14A2Q96R54 314 aa15.42■□□□□ 0.06
PHGDH-229ENST00000641891 FSCN3Q9NQT6 498 aa15.42■□□□□ 0.06
PHGDH-229ENST00000641891 COPS7AQ9UBW8 275 aa15.42■□□□□ 0.06
PHGDH-229ENST00000641891 SEC16AO15027 2179 aa15.42■□□□□ 0.06
PHGDH-229ENST00000641891 A0A0B4J293 547 aa15.42■□□□□ 0.06
PHGDH-229ENST00000641891 NUDT14O95848 222 aa15.42■□□□□ 0.06
PHGDH-229ENST00000641891 IGF2P01344 180 aa15.42■□□□□ 0.06
PHGDH-229ENST00000641891 SDHAP31040 664 aa15.42■□□□□ 0.06
PHGDH-229ENST00000641891 DCAF7P61962 342 aa15.42■□□□□ 0.06
PHGDH-229ENST00000641891 RIN1Q13671 783 aa15.42■□□□□ 0.06
PHGDH-229ENST00000641891 MESTQ5EB52 335 aa15.42■□□□□ 0.06
PHGDH-229ENST00000641891 RSBN1Q5VWQ0 802 aaPredicted RBP15.42■□□□□ 0.06
PHGDH-229ENST00000641891 WDR74Q6RFH5 385 aaPredicted RBP15.42■□□□□ 0.06
PHGDH-229ENST00000641891 NANOGNBQ7Z5D8 188 aa15.42■□□□□ 0.06
PHGDH-229ENST00000641891 TPRA1Q86W33 373 aa15.42■□□□□ 0.06
PHGDH-229ENST00000641891 RDH10Q8IZV5 341 aa15.42■□□□□ 0.06
PHGDH-229ENST00000641891 TRMT10AQ8TBZ6 339 aaKnown RBP15.42■□□□□ 0.06
PHGDH-229ENST00000641891 ORAI1Q96D31 301 aa15.42■□□□□ 0.06
PHGDH-229ENST00000641891 ZNF768Q9H5H4 540 aaKnown RBP15.42■□□□□ 0.06
PHGDH-229ENST00000641891 SRA1Q9HD15 236 aaKnown RBP15.42■□□□□ 0.06
PHGDH-229ENST00000641891 CYSLTR2Q9NS75 346 aa15.42■□□□□ 0.06
PHGDH-229ENST00000641891 KLHDC2Q9Y2U9 406 aa15.42■□□□□ 0.06
PHGDH-229ENST00000641891 PCDHGB7Q9Y5F8 929 aa15.42■□□□□ 0.06
PHGDH-229ENST00000641891 RAB3BP20337 219 aa15.41■□□□□ 0.06
PHGDH-229ENST00000641891 MAP2K3P46734 347 aa15.41■□□□□ 0.06
PHGDH-229ENST00000641891 CAPZA2P47755 286 aa15.41■□□□□ 0.06
PHGDH-229ENST00000641891 ZNF574Q6ZN55 896 aaPredicted RBP15.41■□□□□ 0.06
PHGDH-229ENST00000641891 SLC29A4Q7RTT9 530 aa15.41■□□□□ 0.06
PHGDH-229ENST00000641891 OR6F1Q8NGZ6 308 aa15.41■□□□□ 0.06
PHGDH-229ENST00000641891 ENKURQ8TC29 256 aa15.41■□□□□ 0.06
PHGDH-229ENST00000641891 TBL1XR1Q9BZK7 514 aa15.41■□□□□ 0.06
PHGDH-229ENST00000641891 NPAP1Q9NZP6 1156 aa15.41■□□□□ 0.06
PHGDH-229ENST00000641891 CLEC4AQ9UMR7 237 aa15.41■□□□□ 0.06
PHGDH-229ENST00000641891 TRIOBPQ9H2D6 2365 aa15.41■□□□□ 0.06
PHGDH-229ENST00000641891 TO15178 435 aa15.41■□□□□ 0.06
PHGDH-229ENST00000641891 TFPIP10646 304 aa15.41■□□□□ 0.06
PHGDH-229ENST00000641891 PTBP1P26599 531 aaKnown RBP eCLIP15.41■□□□□ 0.06
PHGDH-229ENST00000641891 MAGEB1P43366 347 aa15.41■□□□□ 0.06
PHGDH-229ENST00000641891 SLC6A8P48029 635 aa15.41■□□□□ 0.06
PHGDH-229ENST00000641891 RPL22L1Q6P5R6 122 aaKnown RBP15.41■□□□□ 0.06
PHGDH-229ENST00000641891 TRILQ7L0X0 811 aa15.41■□□□□ 0.06
PHGDH-229ENST00000641891 LRRC28Q86X40 367 aaPredicted RBP15.41■□□□□ 0.06
PHGDH-229ENST00000641891 ZNF441Q8N8Z8 693 aa15.41■□□□□ 0.06
PHGDH-229ENST00000641891 SLC38A9Q8NBW4 561 aa15.41■□□□□ 0.06
PHGDH-229ENST00000641891 OR5H6Q8NGV6 325 aa15.41■□□□□ 0.06
PHGDH-229ENST00000641891 CEP76Q8TAP6 659 aa15.41■□□□□ 0.06
PHGDH-229ENST00000641891 RNF166Q96A37 237 aaPredicted RBP15.41■□□□□ 0.06
PHGDH-229ENST00000641891 TTYH2Q9BSA4 534 aa15.41■□□□□ 0.06
PHGDH-229ENST00000641891 RXFP3Q9NSD7 469 aa15.41■□□□□ 0.06
PHGDH-229ENST00000641891 GRHPRQ9UBQ7 328 aa15.41■□□□□ 0.06
PHGDH-229ENST00000641891 ARID1BQ8NFD5 2236 aaPredicted RBP15.4■□□□□ 0.06
PHGDH-229ENST00000641891 TVP23AA6NH52 213 aa15.4■□□□□ 0.06
PHGDH-229ENST00000641891 ALG1L2C9J202 215 aa15.4■□□□□ 0.06
PHGDH-229ENST00000641891 LANCL1O43813 399 aa15.4■□□□□ 0.06
PHGDH-229ENST00000641891 TIAF1O95411 115 aa15.4■□□□□ 0.06
PHGDH-229ENST00000641891 GPANK1O95872 356 aa15.4■□□□□ 0.06
PHGDH-229ENST00000641891 CXCR1P25024 350 aa15.4■□□□□ 0.06
PHGDH-229ENST00000641891 NANOS3P60323 173 aaKnown RBP15.4■□□□□ 0.06
PHGDH-229ENST00000641891 IL10RAQ13651 578 aa15.4■□□□□ 0.06
PHGDH-229ENST00000641891 ATAD3CQ5T2N8 411 aa15.4■□□□□ 0.06
PHGDH-229ENST00000641891 EGFL6Q8IUX8 553 aa15.4■□□□□ 0.06
PHGDH-229ENST00000641891 TEX19Q8NA77 164 aa15.4■□□□□ 0.06
PHGDH-229ENST00000641891 OR4D9Q8NGE8 314 aa15.4■□□□□ 0.06
PHGDH-229ENST00000641891 HSD17B8Q92506 261 aa15.4■□□□□ 0.06
PHGDH-229ENST00000641891 KCTD12Q96CX2 325 aaKnown RBP15.4■□□□□ 0.06
PHGDH-229ENST00000641891 UBL7Q96S82 380 aaPredicted RBP15.4■□□□□ 0.06
PHGDH-229ENST00000641891 RNF121Q9H920 327 aa15.4■□□□□ 0.06
PHGDH-229ENST00000641891 SLC6A5Q9Y345 797 aa15.4■□□□□ 0.06
PHGDH-229ENST00000641891 TMEM72A0PK05 275 aa15.39■□□□□ 0.05
PHGDH-229ENST00000641891 C11orf98E9PRG8 122 aa15.39■□□□□ 0.05
PHGDH-229ENST00000641891 BGLAPP02818 100 aa15.39■□□□□ 0.05
PHGDH-229ENST00000641891 PSKH1P11801 424 aa15.39■□□□□ 0.05
PHGDH-229ENST00000641891 SNRPBP14678 240 aaKnown RBP15.39■□□□□ 0.05
PHGDH-229ENST00000641891 ATF1P18846 271 aa15.39■□□□□ 0.05
PHGDH-229ENST00000641891 SLC25A1P53007 311 aa15.39■□□□□ 0.05
PHGDH-229ENST00000641891 CEP78Q5JTW2 689 aa15.39■□□□□ 0.05
PHGDH-229ENST00000641891 GUSBP11Q6P575 273 aa15.39■□□□□ 0.05
PHGDH-229ENST00000641891 KMT5CQ86Y97 462 aa15.39■□□□□ 0.05
PHGDH-229ENST00000641891 WACQ9BTA9 647 aa15.39■□□□□ 0.05
PHGDH-229ENST00000641891 SLC7A5P2Q9GIP4 190 aa15.39■□□□□ 0.05
PHGDH-229ENST00000641891 RBMX2Q9Y388 322 aaKnown RBP15.39■□□□□ 0.05
PHGDH-229ENST00000641891 CPED1A4D0V7 1026 aa15.39■□□□□ 0.05
PHGDH-229ENST00000641891 HTR3EA5X5Y0 456 aa15.39■□□□□ 0.05
PHGDH-229ENST00000641891 TMEM221A6NGB7 291 aa15.39■□□□□ 0.05
PHGDH-229ENST00000641891 LYRM1O43325 122 aa15.39■□□□□ 0.05
PHGDH-229ENST00000641891 SERPINA3P01011 423 aa15.39■□□□□ 0.05
PHGDH-229ENST00000641891 UCHL1P09936 223 aa15.39■□□□□ 0.05
PHGDH-229ENST00000641891 OR8G3PP0DMU2 310 aa15.39■□□□□ 0.05
PHGDH-229ENST00000641891 APEHP13798 732 aaKnown RBP15.39■□□□□ 0.05
PHGDH-229ENST00000641891 EVI2BP34910 448 aa15.39■□□□□ 0.05
PHGDH-229ENST00000641891 RPS27P42677 84 aaKnown RBP15.39■□□□□ 0.05
PHGDH-229ENST00000641891 ZNF684Q5T5D7 378 aa15.39■□□□□ 0.05
PHGDH-229ENST00000641891 OTPQ5XKR4 325 aa15.39■□□□□ 0.05
PHGDH-229ENST00000641891 STT3BQ8TCJ2 826 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms