RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 A0A0G2JK05 382 aa19.55■□□□□ 0.72
CLN6-224ENST00000638076 OR6C76A6NM76 312 aa19.55■□□□□ 0.72
CLN6-224ENST00000638076 TFECO14948 347 aaPredicted RBP19.55■□□□□ 0.72
CLN6-224ENST00000638076 EIF4E2O60573 245 aaKnown RBP19.55■□□□□ 0.72
CLN6-224ENST00000638076 HLA-DQB1P01920 261 aa19.55■□□□□ 0.72
CLN6-224ENST00000638076 EDNRAP25101 427 aa19.55■□□□□ 0.72
CLN6-224ENST00000638076 PSMB10P40306 273 aa19.55■□□□□ 0.72
CLN6-224ENST00000638076 RIN1Q13671 783 aa19.55■□□□□ 0.72
CLN6-224ENST00000638076 LYSMD4Q5XG99 296 aa19.55■□□□□ 0.72
CLN6-224ENST00000638076 TEX19Q8NA77 164 aa19.55■□□□□ 0.72
CLN6-224ENST00000638076 ZNF511Q8NB15 262 aa19.55■□□□□ 0.72
CLN6-224ENST00000638076 STT3BQ8TCJ2 826 aa19.55■□□□□ 0.72
CLN6-224ENST00000638076 TTYH2Q9BSA4 534 aa19.55■□□□□ 0.72
CLN6-224ENST00000638076 EXTL2Q9UBQ6 330 aa19.55■□□□□ 0.72
CLN6-224ENST00000638076 SRPK3Q9UPE1 567 aa19.55■□□□□ 0.72
CLN6-224ENST00000638076 ADAMTS20P59510 1910 aa19.55■□□□□ 0.72
CLN6-224ENST00000638076 CPED1A4D0V7 1026 aa19.54■□□□□ 0.72
CLN6-224ENST00000638076 SCO2O43819 266 aa19.54■□□□□ 0.72
CLN6-224ENST00000638076 HIST1H2ABP04908 130 aa19.54■□□□□ 0.72
CLN6-224ENST00000638076 HTR3AP46098 478 aa19.54■□□□□ 0.72
CLN6-224ENST00000638076 SLC25A1P53007 311 aa19.54■□□□□ 0.72
CLN6-224ENST00000638076 HIST3H2AQ7L7L0 130 aa19.54■□□□□ 0.72
CLN6-224ENST00000638076 NUP54Q7Z3B4 507 aa19.54■□□□□ 0.72
CLN6-224ENST00000638076 EXD3Q8N9H8 876 aa19.54■□□□□ 0.72
CLN6-224ENST00000638076 HIST1H2ACQ93077 130 aa19.54■□□□□ 0.72
CLN6-224ENST00000638076 MRPL48Q96GC5 212 aaKnown RBP19.54■□□□□ 0.72
CLN6-224ENST00000638076 TSPAN32Q96QS1 320 aa19.54■□□□□ 0.72
CLN6-224ENST00000638076 SMAD5Q99717 465 aaKnown RBP19.54■□□□□ 0.72
CLN6-224ENST00000638076 PDCD1LG2Q9BQ51 273 aa19.54■□□□□ 0.72
CLN6-224ENST00000638076 FKRPQ9H9S5 495 aa19.54■□□□□ 0.72
CLN6-224ENST00000638076 INIPQ9NRY2 104 aa19.54■□□□□ 0.72
CLN6-224ENST00000638076 H7C1C5 153 aa19.54■□□□□ 0.72
CLN6-224ENST00000638076 PSMD9O00233 223 aa19.54■□□□□ 0.72
CLN6-224ENST00000638076 WISP1O95388 367 aa19.54■□□□□ 0.72
CLN6-224ENST00000638076 TXNDC12O95881 172 aa19.54■□□□□ 0.72
CLN6-224ENST00000638076 PGCP20142 388 aa19.54■□□□□ 0.72
CLN6-224ENST00000638076 EPHA8P29322 1005 aaPredicted RBP19.54■□□□□ 0.72
CLN6-224ENST00000638076 TMED10P49755 219 aaKnown RBP19.54■□□□□ 0.72
CLN6-224ENST00000638076 LCN6P62502 163 aa19.54■□□□□ 0.72
CLN6-224ENST00000638076 SLC25A35Q3KQZ1 300 aa19.54■□□□□ 0.72
CLN6-224ENST00000638076 GUSBP11Q6P575 273 aa19.54■□□□□ 0.72
CLN6-224ENST00000638076 PAMR1Q6UXH9 720 aa19.54■□□□□ 0.72
CLN6-224ENST00000638076 SLC38A9Q8NBW4 561 aa19.54■□□□□ 0.72
CLN6-224ENST00000638076 RXFP3Q9NSD7 469 aa19.54■□□□□ 0.72
CLN6-224ENST00000638076 NPAP1Q9NZP6 1156 aa19.54■□□□□ 0.72
CLN6-224ENST00000638076 TOX3O15405 576 aaPredicted RBP19.53■□□□□ 0.72
CLN6-224ENST00000638076 CDC40O60508 579 aaKnown RBP eCLIP19.53■□□□□ 0.724e-7■■□□□ 14.1
CLN6-224ENST00000638076 RAB3BP20337 219 aa19.53■□□□□ 0.72
CLN6-224ENST00000638076 EVI2BP34910 448 aa19.53■□□□□ 0.72
CLN6-224ENST00000638076 RPS11P62280 158 aaKnown RBP eCLIP19.53■□□□□ 0.72
CLN6-224ENST00000638076 HSF2Q03933 536 aa19.53■□□□□ 0.72
CLN6-224ENST00000638076 CCDC58Q4VC31 144 aa19.53■□□□□ 0.72
CLN6-224ENST00000638076 MESTQ5EB52 335 aa19.53■□□□□ 0.72
CLN6-224ENST00000638076 C1QL3Q5VWW1 255 aa19.53■□□□□ 0.72
CLN6-224ENST00000638076 ZNF544Q6NX49 715 aa19.53■□□□□ 0.72
CLN6-224ENST00000638076 LRRC28Q86X40 367 aaPredicted RBP19.53■□□□□ 0.72
CLN6-224ENST00000638076 SAMD12Q8N8I0 201 aa19.53■□□□□ 0.72
CLN6-224ENST00000638076 UBL7Q96S82 380 aaPredicted RBP19.53■□□□□ 0.72
CLN6-224ENST00000638076 TGIF2Q9GZN2 237 aa19.53■□□□□ 0.72
CLN6-224ENST00000638076 SYNDIG1Q9H7V2 258 aa19.53■□□□□ 0.72
CLN6-224ENST00000638076 SRA1Q9HD15 236 aaKnown RBP19.53■□□□□ 0.72
CLN6-224ENST00000638076 IDSB3KWA1 339 aa19.53■□□□□ 0.72
CLN6-224ENST00000638076 GP1BBP13224 206 aa19.53■□□□□ 0.72
CLN6-224ENST00000638076 CBFBQ13951 182 aa19.53■□□□□ 0.72
CLN6-224ENST00000638076 MESP1Q9BRJ9 268 aa19.53■□□□□ 0.72
CLN6-224ENST00000638076 CYSLTR2Q9NS75 346 aa19.53■□□□□ 0.72
CLN6-224ENST00000638076 MOKQ9UQ07 419 aa19.53■□□□□ 0.72
CLN6-224ENST00000638076 A0A0G2JMP0 313 aa19.52■□□□□ 0.72
CLN6-224ENST00000638076 A0A0X1KG70 313 aa19.52■□□□□ 0.72
CLN6-224ENST00000638076 DCTN6O00399 190 aa19.52■□□□□ 0.72
CLN6-224ENST00000638076 FADS1O60427 444 aa19.52■□□□□ 0.72
CLN6-224ENST00000638076 CCNKO75909 580 aa19.52■□□□□ 0.72
CLN6-224ENST00000638076 PAHP00439 452 aa19.52■□□□□ 0.72
CLN6-224ENST00000638076 BGLAPP02818 100 aa19.52■□□□□ 0.72
CLN6-224ENST00000638076 EIF4EP06730 217 aaKnown RBP19.52■□□□□ 0.72
CLN6-224ENST00000638076 FOSL2P15408 326 aa19.52■□□□□ 0.72
CLN6-224ENST00000638076 KIR2DL3P43628 341 aa19.52■□□□□ 0.72
CLN6-224ENST00000638076 Q7L0L9 218 aa19.52■□□□□ 0.72
CLN6-224ENST00000638076 OR4M2Q8NGB6 313 aa19.52■□□□□ 0.72
CLN6-224ENST00000638076 OR14A2Q96R54 314 aa19.52■□□□□ 0.72
CLN6-224ENST00000638076 OR6C1Q96RD1 312 aa19.52■□□□□ 0.72
CLN6-224ENST00000638076 DUSP23Q9BVJ7 150 aa19.52■□□□□ 0.72
CLN6-224ENST00000638076 FSCN3Q9NQT6 498 aa19.52■□□□□ 0.72
CLN6-224ENST00000638076 TRAV1-2A0A0B4J238 106 aa19.52■□□□□ 0.71
CLN6-224ENST00000638076 PRR32B1ATL7 298 aa19.52■□□□□ 0.71
CLN6-224ENST00000638076 SLC25A12O75746 678 aa19.52■□□□□ 0.71
CLN6-224ENST00000638076 TIAF1O95411 115 aa19.52■□□□□ 0.71
CLN6-224ENST00000638076 RNF4P78317 190 aa19.52■□□□□ 0.71
CLN6-224ENST00000638076 EMC4Q5J8M3 183 aa19.52■□□□□ 0.71
CLN6-224ENST00000638076 RABEPKQ7Z6M1 372 aa19.52■□□□□ 0.71
CLN6-224ENST00000638076 SYT9Q86SS6 491 aa19.52■□□□□ 0.71
CLN6-224ENST00000638076 RDH10Q8IZV5 341 aa19.52■□□□□ 0.71
CLN6-224ENST00000638076 TRMT10AQ8TBZ6 339 aaKnown RBP19.52■□□□□ 0.71
CLN6-224ENST00000638076 ENKURQ8TC29 256 aa19.52■□□□□ 0.71
CLN6-224ENST00000638076 NDEL1Q9GZM8 345 aa19.52■□□□□ 0.71
CLN6-224ENST00000638076 PAIP2BQ9ULR5 123 aaKnown RBP19.52■□□□□ 0.71
CLN6-224ENST00000638076 TRAV36DV7A0A075B6V5 113 aa19.51■□□□□ 0.71
CLN6-224ENST00000638076 MEIOCA2RUB1 952 aa19.51■□□□□ 0.71
CLN6-224ENST00000638076 B4DXG7 233 aa19.51■□□□□ 0.71
CLN6-224ENST00000638076 ARL6IP5O75915 188 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms