RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 SEZ6L2Q6UXD5 910 aa12.13□□□□□ -0.47
PNKP-228ENST00000637325 H1FNTQ75WM6 255 aaPredicted RBP12.13□□□□□ -0.47
PNKP-228ENST00000637325 SNX32Q86XE0 403 aa12.13□□□□□ -0.47
PNKP-228ENST00000637325 DEPDC4Q8N2C3 294 aa12.13□□□□□ -0.47
PNKP-228ENST00000637325 C17orf78Q8N4C9 275 aa12.13□□□□□ -0.47
PNKP-228ENST00000637325 OR8J3Q8NGG0 315 aa12.13□□□□□ -0.47
PNKP-228ENST00000637325 LILRB1Q8NHL6 650 aaPredicted RBP12.13□□□□□ -0.47
PNKP-228ENST00000637325 VANGL1Q8TAA9 524 aaPredicted RBP12.13□□□□□ -0.47
PNKP-228ENST00000637325 ZNF417Q8TAU3 575 aa12.13□□□□□ -0.47
PNKP-228ENST00000637325 SMAP2Q8WU79 429 aaPredicted RBP12.13□□□□□ -0.47
PNKP-228ENST00000637325 RASSF5Q8WWW0 418 aa12.13□□□□□ -0.47
PNKP-228ENST00000637325 GTPBP3Q969Y2 492 aaKnown RBP12.13□□□□□ -0.47
PNKP-228ENST00000637325 RADILQ96JH8 1075 aa12.13□□□□□ -0.47
PNKP-228ENST00000637325 ZNF587Q96SQ5 575 aaPredicted RBP12.13□□□□□ -0.47
PNKP-228ENST00000637325 ARHGDIGQ99819 225 aa12.13□□□□□ -0.47
PNKP-228ENST00000637325 WFDC6Q9BQY6 131 aa12.13□□□□□ -0.47
PNKP-228ENST00000637325 C1QTNF6Q9BXI9 259 aa12.13□□□□□ -0.47
PNKP-228ENST00000637325 ASPNQ9BXN1 380 aa12.13□□□□□ -0.47
PNKP-228ENST00000637325 GSX2Q9BZM3 304 aa12.13□□□□□ -0.47
PNKP-228ENST00000637325 CCDC134Q9H6E4 229 aa12.13□□□□□ -0.47
PNKP-228ENST00000637325 SLC17A5Q9NRA2 495 aa12.13□□□□□ -0.47
PNKP-228ENST00000637325 CISD1Q9NZ45 108 aaKnown RBP12.13□□□□□ -0.47
PNKP-228ENST00000637325 NPAP1Q9NZP6 1156 aa12.13□□□□□ -0.47
PNKP-228ENST00000637325 POU2F3Q9UKI9 436 aa12.13□□□□□ -0.47
PNKP-228ENST00000637325 MGAT4BQ9UQ53 548 aa12.13□□□□□ -0.47
PNKP-228ENST00000637325 B3GALT5Q9Y2C3 310 aa12.13□□□□□ -0.47
PNKP-228ENST00000637325 AMDHD2Q9Y303 409 aa12.13□□□□□ -0.47
PNKP-228ENST00000637325 CAPN7Q9Y6W3 813 aa12.13□□□□□ -0.47
PNKP-228ENST00000637325 NAV3Q8IVL0 2385 aa12.13□□□□□ -0.47
PNKP-228ENST00000637325 IGKV1D-42A0A075B6H8 117 aa12.12□□□□□ -0.47
PNKP-228ENST00000637325 CPSF4LA6NMK7 179 aaKnown RBP12.12□□□□□ -0.47
PNKP-228ENST00000637325 AKAP8O43823 692 aaKnown RBP12.12□□□□□ -0.47
PNKP-228ENST00000637325 TPST2O60704 377 aa12.12□□□□□ -0.47
PNKP-228ENST00000637325 FMO6PO60774 539 aa12.12□□□□□ -0.47
PNKP-228ENST00000637325 WNT11O96014 354 aa12.12□□□□□ -0.47
PNKP-228ENST00000637325 PTNP21246 168 aa12.12□□□□□ -0.47
PNKP-228ENST00000637325 PTAFRP25105 342 aa12.12□□□□□ -0.47
PNKP-228ENST00000637325 ATP5J2P56134 94 aa12.12□□□□□ -0.47
PNKP-228ENST00000637325 PRPS1P60891 318 aa12.12□□□□□ -0.47
PNKP-228ENST00000637325 NRF1Q16656 503 aa12.12□□□□□ -0.47
PNKP-228ENST00000637325 RABL3Q5HYI8 236 aa12.12□□□□□ -0.47
PNKP-228ENST00000637325 SWT1Q5T5J6 900 aaKnown RBP12.12□□□□□ -0.47
PNKP-228ENST00000637325 HMBOX1Q6NT76 420 aa12.12□□□□□ -0.47
PNKP-228ENST00000637325 ZNF613Q6PF04 617 aa12.12□□□□□ -0.47
PNKP-228ENST00000637325 SLC22A25Q6T423 547 aa12.12□□□□□ -0.47
PNKP-228ENST00000637325 KRTAP1-3Q8IUG1 177 aa12.12□□□□□ -0.47
PNKP-228ENST00000637325 WDR31Q8NA23 367 aa12.12□□□□□ -0.47
PNKP-228ENST00000637325 GPR32P1Q8NGA4 272 aa12.12□□□□□ -0.47
PNKP-228ENST00000637325 OR6T1Q8NGN1 323 aa12.12□□□□□ -0.47
PNKP-228ENST00000637325 Q96MF0 132 aa12.12□□□□□ -0.47
PNKP-228ENST00000637325 AMBRA1Q9C0C7 1298 aa12.12□□□□□ -0.47
PNKP-228ENST00000637325 ALG2Q9H553 416 aa12.12□□□□□ -0.47
PNKP-228ENST00000637325 FAIMQ9NVQ4 179 aa12.12□□□□□ -0.47
PNKP-228ENST00000637325 SEC14L4Q9UDX3 406 aa12.12□□□□□ -0.47
PNKP-228ENST00000637325 CORINQ9Y5Q5 1042 aa12.12□□□□□ -0.47
PNKP-228ENST00000637325 MAGED1Q9Y5V3 778 aaPredicted RBP12.12□□□□□ -0.47
PNKP-228ENST00000637325 ZFHX3Q15911 3703 aa12.11□□□□□ -0.47
PNKP-228ENST00000637325 SHISA9B4DS77 424 aa12.11□□□□□ -0.47
PNKP-228ENST00000637325 SLC43A1O75387 559 aa12.11□□□□□ -0.47
PNKP-228ENST00000637325 UPK3AO75631 287 aa12.11□□□□□ -0.47
PNKP-228ENST00000637325 CD40P25942 277 aa12.11□□□□□ -0.47
PNKP-228ENST00000637325 GZMMP51124 257 aa12.11□□□□□ -0.47
PNKP-228ENST00000637325 LGALS3BPQ08380 585 aa12.11□□□□□ -0.47
PNKP-228ENST00000637325 PMS2P3Q13401 168 aa12.11□□□□□ -0.47
PNKP-228ENST00000637325 ENTPD8Q5MY95 495 aa12.11□□□□□ -0.47
PNKP-228ENST00000637325 ERICH5Q6P6B1 374 aa12.11□□□□□ -0.47
PNKP-228ENST00000637325 CCDC80Q76M96 950 aa12.11□□□□□ -0.47
PNKP-228ENST00000637325 UEVLDQ8IX04 471 aa12.11□□□□□ -0.47
PNKP-228ENST00000637325 OR6S1Q8NH40 331 aa12.11□□□□□ -0.47
PNKP-228ENST00000637325 PROX1Q92786 737 aa12.11□□□□□ -0.47
PNKP-228ENST00000637325 TAMM41Q96BW9 452 aa12.11□□□□□ -0.47
PNKP-228ENST00000637325 TRMT61AQ96FX7 289 aaKnown RBP12.11□□□□□ -0.47
PNKP-228ENST00000637325 C18orf12Q96KH6 178 aa12.11□□□□□ -0.47
PNKP-228ENST00000637325 ALKBH3Q96Q83 286 aaPredicted RBP12.11□□□□□ -0.47
PNKP-228ENST00000637325 TMEM43Q9BTV4 400 aa12.11□□□□□ -0.47
PNKP-228ENST00000637325 BDH2Q9BUT1 245 aa12.11□□□□□ -0.47
PNKP-228ENST00000637325 DLL4Q9NR61 685 aa12.11□□□□□ -0.47
PNKP-228ENST00000637325 ARFGEF3Q5TH69 2177 aa12.11□□□□□ -0.47
PNKP-228ENST00000637325 SLC22A2O15244 555 aa12.1□□□□□ -0.47
PNKP-228ENST00000637325 ATP8B1O43520 1251 aa12.1□□□□□ -0.47
PNKP-228ENST00000637325 CHP2O43745 196 aa12.1□□□□□ -0.47
PNKP-228ENST00000637325 CCDC22O60826 627 aa12.1□□□□□ -0.47
PNKP-228ENST00000637325 IFNA14P01570 189 aa12.1□□□□□ -0.47
PNKP-228ENST00000637325 BGLAPP02818 100 aa12.1□□□□□ -0.47
PNKP-228ENST00000637325 SOD3P08294 240 aa12.1□□□□□ -0.47
PNKP-228ENST00000637325 PAX1P15863 534 aa12.1□□□□□ -0.47
PNKP-228ENST00000637325 CD247P20963 164 aa12.1□□□□□ -0.47
PNKP-228ENST00000637325 UBE2NP61088 152 aaKnown RBP12.1□□□□□ -0.47
PNKP-228ENST00000637325 HIKESHIQ53FT3 197 aa12.1□□□□□ -0.47
PNKP-228ENST00000637325 C1QTNF12Q5T7M4 302 aa12.1□□□□□ -0.47
PNKP-228ENST00000637325 TTC33Q6PID6 262 aaPredicted RBP12.1□□□□□ -0.47
PNKP-228ENST00000637325 CALHM3Q86XJ0 350 aa12.1□□□□□ -0.47
PNKP-228ENST00000637325 RBM45Q8IUH3 476 aaKnown RBP12.1□□□□□ -0.47
PNKP-228ENST00000637325 GPR137CQ8N3F9 429 aa12.1□□□□□ -0.47
PNKP-228ENST00000637325 SCAIQ8N9R8 606 aa12.1□□□□□ -0.47
PNKP-228ENST00000637325 ADPRHL1Q8NDY3 354 aa12.1□□□□□ -0.47
PNKP-228ENST00000637325 OR1K1Q8NGR3 316 aa12.1□□□□□ -0.47
PNKP-228ENST00000637325 C10orf82Q8WW14 230 aa12.1□□□□□ -0.47
PNKP-228ENST00000637325 IGFBPL1Q8WX77 278 aa12.1□□□□□ -0.47
PNKP-228ENST00000637325 LINC00470Q9BZP3 86 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms