RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 PLPP3O14495 311 aa14.25□□□□□ -0.13
CLN6-216ENST00000636876 OR10H3O60404 316 aa14.25□□□□□ -0.13
CLN6-216ENST00000636876 SS18L1O75177 396 aaPredicted RBP14.25□□□□□ -0.13
CLN6-216ENST00000636876 CCNB2O95067 398 aa14.25□□□□□ -0.13
CLN6-216ENST00000636876 VAMP5O95183 116 aa14.25□□□□□ -0.13
CLN6-216ENST00000636876 PLGP00747 810 aaPredicted RBP14.25□□□□□ -0.13
CLN6-216ENST00000636876 FASP25445 335 aa14.25□□□□□ -0.13
CLN6-216ENST00000636876 CTSSP25774 331 aa14.25□□□□□ -0.13
CLN6-216ENST00000636876 DNAJA1P31689 397 aaKnown RBP14.25□□□□□ -0.13
CLN6-216ENST00000636876 GPR4P46093 362 aa14.25□□□□□ -0.13
CLN6-216ENST00000636876 OMPP47874 163 aa14.25□□□□□ -0.13
CLN6-216ENST00000636876 SLC16A1P53985 500 aa14.25□□□□□ -0.13
CLN6-216ENST00000636876 IST1P53990 364 aa14.25□□□□□ -0.13
CLN6-216ENST00000636876 FOXF2Q12947 444 aa14.25□□□□□ -0.13
CLN6-216ENST00000636876 SLC17A1Q14916 467 aa14.25□□□□□ -0.13
CLN6-216ENST00000636876 TMEM225Q6GV28 225 aa14.25□□□□□ -0.13
CLN6-216ENST00000636876 TMPRSS11FQ6ZWK6 438 aa14.25□□□□□ -0.13
CLN6-216ENST00000636876 NANOGNBQ7Z5D8 188 aa14.25□□□□□ -0.13
CLN6-216ENST00000636876 CCDC71Q8IV32 467 aaPredicted RBP14.25□□□□□ -0.13
CLN6-216ENST00000636876 FAM46AQ96IP4 442 aaKnown RBP14.25□□□□□ -0.13
CLN6-216ENST00000636876 TACO1Q9BSH4 297 aaKnown RBP14.25□□□□□ -0.13
CLN6-216ENST00000636876 SF3B5Q9BWJ5 86 aaKnown RBP14.25□□□□□ -0.13
CLN6-216ENST00000636876 BCO1Q9HAY6 547 aa14.25□□□□□ -0.13
CLN6-216ENST00000636876 NTN4Q9HB63 628 aa14.25□□□□□ -0.13
CLN6-216ENST00000636876 RNF6Q9Y252 685 aa14.25□□□□□ -0.13
CLN6-216ENST00000636876 DOPEY1Q5JWR5 2465 aa14.25□□□□□ -0.13
CLN6-216ENST00000636876 EFCAB9A8MZ26 197 aa14.24□□□□□ -0.13
CLN6-216ENST00000636876 RRP9O43818 475 aaKnown RBP14.24□□□□□ -0.13
CLN6-216ENST00000636876 E2F6O75461 281 aa14.24□□□□□ -0.13
CLN6-216ENST00000636876 SAGP10523 405 aaPredicted RBP14.24□□□□□ -0.13
CLN6-216ENST00000636876 AGTR1P30556 359 aa14.24□□□□□ -0.13
CLN6-216ENST00000636876 IFNGR2P38484 337 aa14.24□□□□□ -0.13
CLN6-216ENST00000636876 KIR2DL2P43627 348 aaPredicted RBP14.24□□□□□ -0.13
CLN6-216ENST00000636876 SMSP52788 366 aa14.24□□□□□ -0.13
CLN6-216ENST00000636876 LAPTM4AQ15012 233 aa14.24□□□□□ -0.13
CLN6-216ENST00000636876 MICAQ29983 383 aa14.24□□□□□ -0.13
CLN6-216ENST00000636876 ZNF770Q6IQ21 691 aaPredicted RBP14.24□□□□□ -0.13
CLN6-216ENST00000636876 ZNF771Q7L3S4 317 aaPredicted RBP14.24□□□□□ -0.13
CLN6-216ENST00000636876 FAM214BQ7L5A3 538 aa14.24□□□□□ -0.13
CLN6-216ENST00000636876 ZER1Q7Z7L7 766 aa14.24□□□□□ -0.13
CLN6-216ENST00000636876 TMEM179BQ7Z7N9 219 aa14.24□□□□□ -0.13
CLN6-216ENST00000636876 OR9K2Q8NGE7 335 aa14.24□□□□□ -0.13
CLN6-216ENST00000636876 OR9Q2Q8NGE9 314 aa14.24□□□□□ -0.13
CLN6-216ENST00000636876 LRTOMTQ8WZ04 291 aa14.24□□□□□ -0.13
CLN6-216ENST00000636876 OXGR1Q96P68 337 aa14.24□□□□□ -0.13
CLN6-216ENST00000636876 SFXN3Q9BWM7 321 aa14.24□□□□□ -0.13
CLN6-216ENST00000636876 S100A14Q9HCY8 104 aa14.24□□□□□ -0.13
CLN6-216ENST00000636876 EMC3Q9P0I2 261 aa14.24□□□□□ -0.13
CLN6-216ENST00000636876 EMC9Q9Y3B6 208 aa14.24□□□□□ -0.13
CLN6-216ENST00000636876 LOC102725191A0A1B0GVB3 256 aa14.23□□□□□ -0.13
CLN6-216ENST00000636876 ZNF724A8MTY0 619 aa14.23□□□□□ -0.13
CLN6-216ENST00000636876 MS4A18H0YCH9 400 aa14.23□□□□□ -0.13
CLN6-216ENST00000636876 CDC42EP2O14613 210 aa14.23□□□□□ -0.13
CLN6-216ENST00000636876 GPR171O14626 319 aa14.23□□□□□ -0.13
CLN6-216ENST00000636876 KLF4O43474 513 aa14.23□□□□□ -0.13
CLN6-216ENST00000636876 ZG16O60844 167 aa14.23□□□□□ -0.13
CLN6-216ENST00000636876 TNFSF13O75888 250 aa14.23□□□□□ -0.13
CLN6-216ENST00000636876 IL18BPO95998 194 aa14.23□□□□□ -0.13
CLN6-216ENST00000636876 HPRP00739 348 aa14.23□□□□□ -0.13
CLN6-216ENST00000636876 YES1P07947 543 aa14.23□□□□□ -0.13
CLN6-216ENST00000636876 TSPAN19P0C672 248 aa14.23□□□□□ -0.13
CLN6-216ENST00000636876 CHRNB4P30926 498 aa14.23□□□□□ -0.13
CLN6-216ENST00000636876 UQCRC1P31930 480 aa14.23□□□□□ -0.13
CLN6-216ENST00000636876 SLC9A3P48764 834 aa14.23□□□□□ -0.13
CLN6-216ENST00000636876 SIRPAP78324 504 aa14.23□□□□□ -0.13
CLN6-216ENST00000636876 SRSF1Q07955 248 aaKnown RBP eCLIP14.23□□□□□ -0.13
CLN6-216ENST00000636876 PUDPQ08623 228 aa14.23□□□□□ -0.13
CLN6-216ENST00000636876 ZP4Q12836 540 aa14.23□□□□□ -0.13
CLN6-216ENST00000636876 POU4F3Q15319 338 aa14.23□□□□□ -0.13
CLN6-216ENST00000636876 MS4A18Q3C1V0 323 aa14.23□□□□□ -0.13
CLN6-216ENST00000636876 EEF1A1P5Q5VTE0 462 aa14.23□□□□□ -0.13
CLN6-216ENST00000636876 HMBOX1Q6NT76 420 aa14.23□□□□□ -0.13
CLN6-216ENST00000636876 C1orf94Q6P1W5 598 aa14.23□□□□□ -0.13
CLN6-216ENST00000636876 PGBD2Q6P3X8 592 aa14.23□□□□□ -0.13
CLN6-216ENST00000636876 AMIGO2Q86SJ2 522 aa14.23□□□□□ -0.13
CLN6-216ENST00000636876 OAFQ86UD1 273 aa14.23□□□□□ -0.13
CLN6-216ENST00000636876 GPAT4Q86UL3 456 aa14.23□□□□□ -0.13
CLN6-216ENST00000636876 TUSC5Q8IXB3 177 aa14.23□□□□□ -0.13
CLN6-216ENST00000636876 KDM8Q8N371 416 aa14.23□□□□□ -0.13
CLN6-216ENST00000636876 CNEP1R1Q8N9A8 125 aa14.23□□□□□ -0.13
CLN6-216ENST00000636876 OR13C2Q8NGS9 318 aa14.23□□□□□ -0.13
CLN6-216ENST00000636876 GNPDA2Q8TDQ7 276 aa14.23□□□□□ -0.13
CLN6-216ENST00000636876 GIPC3Q8TF64 312 aa14.23□□□□□ -0.13
CLN6-216ENST00000636876 ASB5Q8WWX0 329 aa14.23□□□□□ -0.13
CLN6-216ENST00000636876 STMN2Q93045 179 aa14.23□□□□□ -0.13
CLN6-216ENST00000636876 SDCCAG3Q96C92 435 aa14.23□□□□□ -0.13
CLN6-216ENST00000636876 GPA33Q99795 319 aa14.23□□□□□ -0.13
CLN6-216ENST00000636876 BDH2Q9BUT1 245 aa14.23□□□□□ -0.13
CLN6-216ENST00000636876 TAS2R5Q9NYW4 299 aa14.23□□□□□ -0.13
CLN6-216ENST00000636876 COQ3Q9NZJ6 369 aa14.23□□□□□ -0.13
CLN6-216ENST00000636876 B3GAT1Q9P2W7 334 aa14.23□□□□□ -0.13
CLN6-216ENST00000636876 ZNF629Q9UEG4 869 aaPredicted RBP14.23□□□□□ -0.13
CLN6-216ENST00000636876 FLVCR1Q9Y5Y0 555 aa14.23□□□□□ -0.13
CLN6-216ENST00000636876 ICE1Q9Y2F5 2266 aa14.23□□□□□ -0.13
CLN6-216ENST00000636876 USP9YO00507 2555 aaPredicted RBP14.23□□□□□ -0.13
CLN6-216ENST00000636876 CLEC18AA5D8T8 446 aa14.22□□□□□ -0.13
CLN6-216ENST00000636876 ARRDC5A6NEK1 342 aa14.22□□□□□ -0.13
CLN6-216ENST00000636876 BLOC1S5-TXNDC5H3BN57 136 aa14.22□□□□□ -0.13
CLN6-216ENST00000636876 AGFG2O95081 481 aa14.22□□□□□ -0.13
CLN6-216ENST00000636876 OR6A2O95222 327 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms