RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 NCBP2-AS2Q69YL0 99 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 PDPK2PQ6A1A2 396 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 RTL6Q6ICC9 239 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 DNAJC24Q6P3W2 148 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 AFTPHQ6ULP2 937 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 FIP1L1Q6UN15 594 aaKnown RBP2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 IGFL3Q6UXB1 125 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 WASH2PQ6VEQ5 465 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 HOGA1Q86XE5 327 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 DCUN1D3Q8IWE4 304 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 PARP8Q8N3A8 854 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 BCORP1Q8N888 145 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 ACBD4Q8NC06 268 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 CCDC112Q8NEF3 446 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 OR5M9Q8NGP3 310 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 OR6S1Q8NH40 331 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 DTX3LQ8TDB6 740 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 GPR148Q8TDV2 347 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 SSC4DQ8WTU2 575 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 CHPT1Q8WUD6 406 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 CT55Q8WUE5 264 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 TMEM45BQ96B21 275 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 TRIM44Q96DX7 344 aaPredicted RBP2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 PRAC1Q96KF2 57 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 VPS35Q96QK1 796 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 RANBP9Q96S59 729 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 EPYCQ99645 322 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 CTRCQ99895 268 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 TIMM29Q9BSF4 260 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 TBC1D10AQ9BXI6 508 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 ULBP3Q9BZM4 244 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 SYNDIG1Q9H7V2 258 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 GPN2Q9H9Y4 310 aaPredicted RBP2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 ROPN1Q9HAT0 212 aaPredicted RBP2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 C3orf14Q9HBI5 128 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 SLC40A1Q9NP59 571 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 MED17Q9NVC6 651 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 SMOXQ9NWM0 555 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 SLC39A1Q9NY26 324 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 ADAM22Q9P0K1 906 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 RCOR3Q9P2K3 495 aaPredicted RBP2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 ATXN10Q9UBB4 475 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 SLC23A2Q9UGH3 650 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 RPL26L1Q9UNX3 145 aaKnown RBP2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 MGAT4BQ9UQ53 548 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 TCF19Q9Y242 345 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 BTRCQ9Y297 605 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 WIPI2Q9Y4P8 454 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 PKDREJQ9NTG1 2253 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 ATRQ13535 2644 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 NBEAL1Q6ZS30 2694 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 CCDC88CQ9P219 2028 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 ACANP16112 2415 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 MED13LQ71F56 2210 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 COL6A5A8TX70 2615 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 PCNX1Q96RV3 2341 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 ANK3Q12955 4377 aaKnown RBP2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 IGHV5-51A0A0C4DH38 117 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 IQCMA0A1B0GVH7 501 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 FAM230AA0A1W2PPH8 454 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 A0A1W2PQ72 361 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 SH3PXD2BA1X283 911 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 TLCD2A6NGC4 264 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 TCP11X1B4DZS4 312 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 MKRN2OSH3BPM6 223 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 POLR1CO15160 346 aaPredicted RBP2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 SIGLEC5O15389 551 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 TLX2O43763 284 aaPredicted RBP2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 KIAA0513O60268 411 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 SPAG6O75602 509 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 KLF7O75840 302 aaPredicted RBP2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 KIAA0754O94854 1291 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 JCHAINP01591 159 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 KRT8P05787 483 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 ZCCHC18P0CG32 403 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 GZMAP12544 262 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 FOLR1P15328 257 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 TCN2P20062 427 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 PTPN4P29074 926 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 CHRNB4P30926 498 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 PRDX2P32119 198 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 GPR183P32249 361 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 DLSTP36957 453 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 TSFMP43897 325 aaKnown RBP2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 MTIF2P46199 727 aaKnown RBP2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 GABRA4P48169 554 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 PAX9P55771 341 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 MAXP61244 160 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 PMP22Q01453 160 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 HSF2Q03933 536 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 GBE1Q04446 702 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 RIGQ13278 110 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 PEX6Q13608 980 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 DPYSL3Q14195 570 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 ZNF235Q14590 738 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 SYCP1Q15431 976 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 DEFB109BQ30KR1 87 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 ANKDD1AQ495B1 522 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 NADK2Q4G0N4 442 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 RFTN2Q52LD8 501 aaPredicted RBP2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms