RNA–Protein interactions for RNA: ENST00000633627.1

CROCCP4-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 4, humanhuman

TSL 3 BASIC

Gene CROCCP4, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP4-202ENST00000633627 KDM8Q8N371 416 aa17.22■□□□□ 0.35
CROCCP4-202ENST00000633627 C10orf53Q8N6V4 93 aa17.22■□□□□ 0.35
CROCCP4-202ENST00000633627 ZNF610Q8N9Z0 462 aa17.22■□□□□ 0.35
CROCCP4-202ENST00000633627 LIPHQ8WWY8 451 aa17.22■□□□□ 0.35
CROCCP4-202ENST00000633627 RNASE6Q93091 150 aaKnown RBP17.22■□□□□ 0.35
CROCCP4-202ENST00000633627 ANKHD1Q8IWZ3 2542 aaKnown RBP17.21■□□□□ 0.35
CROCCP4-202ENST00000633627 TCRBV3S1A0A5B6 114 aa17.21■□□□□ 0.35
CROCCP4-202ENST00000633627 MS4A18H0YCH9 400 aa17.21■□□□□ 0.35
CROCCP4-202ENST00000633627 PLPP3O14495 311 aa17.21■□□□□ 0.35
CROCCP4-202ENST00000633627 PIP5K1CO60331 668 aa17.21■□□□□ 0.35
CROCCP4-202ENST00000633627 IGFBP2P18065 325 aa17.21■□□□□ 0.35
CROCCP4-202ENST00000633627 EDNRAP25101 427 aa17.21■□□□□ 0.35
CROCCP4-202ENST00000633627 PCYT1AP49585 367 aa17.21■□□□□ 0.35
CROCCP4-202ENST00000633627 CHRNB3Q05901 458 aa17.21■□□□□ 0.35
CROCCP4-202ENST00000633627 MS4A18Q3C1V0 323 aa17.21■□□□□ 0.35
CROCCP4-202ENST00000633627 FAM98BQ52LJ0 330 aaKnown RBP17.21■□□□□ 0.35
CROCCP4-202ENST00000633627 TBPL2Q6SJ96 375 aa17.21■□□□□ 0.35
CROCCP4-202ENST00000633627 TFAP2EQ6VUC0 442 aa17.21■□□□□ 0.35
CROCCP4-202ENST00000633627 NHLRC1Q6VVB1 395 aa17.21■□□□□ 0.35
CROCCP4-202ENST00000633627 CREB3L2Q70SY1 520 aa17.21■□□□□ 0.35
CROCCP4-202ENST00000633627 EPHX4Q8IUS5 362 aa17.21■□□□□ 0.35
CROCCP4-202ENST00000633627 NRMQ8IXM6 262 aa17.21■□□□□ 0.35
CROCCP4-202ENST00000633627 LRRC17Q8N6Y2 441 aa17.21■□□□□ 0.35
CROCCP4-202ENST00000633627 OR5J2Q8NH18 312 aa17.21■□□□□ 0.35
CROCCP4-202ENST00000633627 UTP4Q969X6 686 aaKnown RBP17.21■□□□□ 0.35
CROCCP4-202ENST00000633627 SGTBQ96EQ0 304 aa17.21■□□□□ 0.35
CROCCP4-202ENST00000633627 OXGR1Q96P68 337 aa17.21■□□□□ 0.35
CROCCP4-202ENST00000633627 ZNF347Q96SE7 839 aa17.21■□□□□ 0.35
CROCCP4-202ENST00000633627 ASPNQ9BXN1 380 aa17.21■□□□□ 0.35
CROCCP4-202ENST00000633627 C12orf49Q9H741 205 aa17.21■□□□□ 0.35
CROCCP4-202ENST00000633627 NANSQ9NR45 359 aa17.21■□□□□ 0.35
CROCCP4-202ENST00000633627 C6orf203Q9P0P8 240 aaPredicted RBP17.21■□□□□ 0.35
CROCCP4-202ENST00000633627 ZNF229Q9UJW7 825 aa17.21■□□□□ 0.35
CROCCP4-202ENST00000633627 TESMINQ9Y4I5 508 aa17.21■□□□□ 0.35
CROCCP4-202ENST00000633627 TRBV4-1A0A0J9YWV2 114 aa17.2■□□□□ 0.34
CROCCP4-202ENST00000633627 OR7A10O76100 309 aa17.2■□□□□ 0.34
CROCCP4-202ENST00000633627 HPRP00739 348 aa17.2■□□□□ 0.34
CROCCP4-202ENST00000633627 UMPSP11172 480 aa17.2■□□□□ 0.34
CROCCP4-202ENST00000633627 OR3A2P47893 321 aa17.2■□□□□ 0.34
CROCCP4-202ENST00000633627 PRKCDQ05655 676 aa17.2■□□□□ 0.34
CROCCP4-202ENST00000633627 PMS2P3Q13401 168 aa17.2■□□□□ 0.34
CROCCP4-202ENST00000633627 PODNL1Q6PEZ8 512 aa17.2■□□□□ 0.34
CROCCP4-202ENST00000633627 MBOAT2Q6ZWT7 520 aa17.2■□□□□ 0.34
CROCCP4-202ENST00000633627 GPAT4Q86UL3 456 aa17.2■□□□□ 0.34
CROCCP4-202ENST00000633627 CANT1Q8WVQ1 401 aa17.2■□□□□ 0.34
CROCCP4-202ENST00000633627 TMEM45BQ96B21 275 aa17.2■□□□□ 0.34
CROCCP4-202ENST00000633627 ZNF385AQ96PM9 386 aaKnown RBP17.2■□□□□ 0.34
CROCCP4-202ENST00000633627 RBM24Q9BX46 236 aaKnown RBP17.2■□□□□ 0.34
CROCCP4-202ENST00000633627 ENKD1Q9H0I2 346 aa17.2■□□□□ 0.34
CROCCP4-202ENST00000633627 FANCFQ9NPI8 374 aa17.2■□□□□ 0.34
CROCCP4-202ENST00000633627 FOXD3Q9UJU5 478 aaPredicted RBP17.2■□□□□ 0.34
CROCCP4-202ENST00000633627 NOSIPQ9Y314 301 aaKnown RBP17.2■□□□□ 0.34
CROCCP4-202ENST00000633627 ASH1LQ9NR48 2969 aaKnown RBP17.19■□□□□ 0.34
CROCCP4-202ENST00000633627 DHRS12A0PJE2 317 aa17.19■□□□□ 0.34
CROCCP4-202ENST00000633627 TSPAN19P0C672 248 aa17.19■□□□□ 0.34
CROCCP4-202ENST00000633627 RAP2AP10114 183 aa17.19■□□□□ 0.34
CROCCP4-202ENST00000633627 IFI30P13284 250 aa17.19■□□□□ 0.34
CROCCP4-202ENST00000633627 FUT1P19526 365 aa17.19■□□□□ 0.34
CROCCP4-202ENST00000633627 HMGA2P52926 109 aa17.19■□□□□ 0.34
CROCCP4-202ENST00000633627 SMIM11AP58511 58 aa17.19■□□□□ 0.34
CROCCP4-202ENST00000633627 ZP4Q12836 540 aa17.19■□□□□ 0.34
CROCCP4-202ENST00000633627 SEC23BQ15437 767 aa17.19■□□□□ 0.34
CROCCP4-202ENST00000633627 FGD3Q5JSP0 725 aa17.19■□□□□ 0.34
CROCCP4-202ENST00000633627 SP5Q6BEB4 398 aaPredicted RBP17.19■□□□□ 0.34
CROCCP4-202ENST00000633627 ZNF730Q6ZMV8 503 aa17.19■□□□□ 0.34
CROCCP4-202ENST00000633627 SPATA24Q86W54 205 aa17.19■□□□□ 0.34
CROCCP4-202ENST00000633627 BPIFA2Q96DR5 249 aa17.19■□□□□ 0.34
CROCCP4-202ENST00000633627 GALNT8Q9NY28 637 aa17.19■□□□□ 0.34
CROCCP4-202ENST00000633627 TAS2R5Q9NYW4 299 aa17.19■□□□□ 0.34
CROCCP4-202ENST00000633627 TRAF3IP2O43734 574 aaPredicted RBP17.18■□□□□ 0.34
CROCCP4-202ENST00000633627 GADD45GO95257 159 aa17.18■□□□□ 0.34
CROCCP4-202ENST00000633627 NQO1P15559 274 aaKnown RBP17.18■□□□□ 0.34
CROCCP4-202ENST00000633627 MAKP20794 623 aa17.18■□□□□ 0.34
CROCCP4-202ENST00000633627 COL8A1P27658 744 aa17.18■□□□□ 0.34
CROCCP4-202ENST00000633627 RRM2P31350 389 aa17.18■□□□□ 0.34
CROCCP4-202ENST00000633627 LIMS1P48059 325 aa17.18■□□□□ 0.34
CROCCP4-202ENST00000633627 SPIBQ01892 262 aa17.18■□□□□ 0.34
CROCCP4-202ENST00000633627 PUDPQ08623 228 aa17.18■□□□□ 0.34
CROCCP4-202ENST00000633627 STK32CQ86UX6 486 aa17.18■□□□□ 0.34
CROCCP4-202ENST00000633627 OR52J3Q8NH60 311 aa17.18■□□□□ 0.34
CROCCP4-202ENST00000633627 LRRC46Q96FV0 321 aa17.18■□□□□ 0.34
CROCCP4-202ENST00000633627 CHID1Q9BWS9 393 aa17.18■□□□□ 0.34
CROCCP4-202ENST00000633627 PARPBPQ9NWS1 579 aa17.18■□□□□ 0.34
CROCCP4-202ENST00000633627 ELOVL5Q9NYP7 299 aa17.18■□□□□ 0.34
CROCCP4-202ENST00000633627 SH3PXD2BA1X283 911 aa17.17■□□□□ 0.34
CROCCP4-202ENST00000633627 MRPL33O75394 65 aaKnown RBP17.17■□□□□ 0.34
CROCCP4-202ENST00000633627 KRT36O76013 467 aa17.17■□□□□ 0.34
CROCCP4-202ENST00000633627 ADORA3P0DMS8 318 aa17.17■□□□□ 0.34
CROCCP4-202ENST00000633627 HLA-DOBP13765 273 aa17.17■□□□□ 0.34
CROCCP4-202ENST00000633627 ZNF43P17038 809 aa17.17■□□□□ 0.34
CROCCP4-202ENST00000633627 HOXB6P17509 224 aaKnown RBP17.17■□□□□ 0.34
CROCCP4-202ENST00000633627 UQCRC1P31930 480 aa17.17■□□□□ 0.34
CROCCP4-202ENST00000633627 CD79BP40259 229 aa17.17■□□□□ 0.34
CROCCP4-202ENST00000633627 FAM27E3Q08E93 113 aa17.17■□□□□ 0.34
CROCCP4-202ENST00000633627 BEND4Q6ZU67 534 aa17.17■□□□□ 0.34
CROCCP4-202ENST00000633627 TMPRSS11FQ6ZWK6 438 aa17.17■□□□□ 0.34
CROCCP4-202ENST00000633627 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.17■□□□□ 0.34
CROCCP4-202ENST00000633627 YTHDF3Q7Z739 585 aaKnown RBP17.17■□□□□ 0.34
CROCCP4-202ENST00000633627 PXKQ7Z7A4 578 aa17.17■□□□□ 0.34
CROCCP4-202ENST00000633627 MEX3DQ86XN8 651 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms