RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 PLEKHG7Q6ZR37 379 aa20■□□□□ 0.79
PNKP-220ENST00000627232 SSX6Q7RTT6 188 aa20■□□□□ 0.79
PNKP-220ENST00000627232 SNX29P2Q8IUI4 249 aa20■□□□□ 0.79
PNKP-220ENST00000627232 LYSMD2Q8IV50 215 aa20■□□□□ 0.79
PNKP-220ENST00000627232 OR5J2Q8NH18 312 aa20■□□□□ 0.79
PNKP-220ENST00000627232 C8orf44Q96CB5 159 aa20■□□□□ 0.79
PNKP-220ENST00000627232 LOXL4Q96JB6 756 aa20■□□□□ 0.79
PNKP-220ENST00000627232 TSPAN32Q96QS1 320 aa20■□□□□ 0.79
PNKP-220ENST00000627232 DCLRE1CQ96SD1 692 aaKnown RBP20■□□□□ 0.79
PNKP-220ENST00000627232 ALG12Q9BV10 488 aa20■□□□□ 0.79
PNKP-220ENST00000627232 CCDC32Q9BV29 185 aa20■□□□□ 0.79
PNKP-220ENST00000627232 AKIRIN1Q9H9L7 192 aaPredicted RBP20■□□□□ 0.79
PNKP-220ENST00000627232 MYOTQ9UBF9 498 aa20■□□□□ 0.79
PNKP-220ENST00000627232 CD8B2A6NJW9 211 aa19.99■□□□□ 0.79
PNKP-220ENST00000627232 C9J4A7 227 aa19.99■□□□□ 0.79
PNKP-220ENST00000627232 CASKO14936 926 aa19.99■□□□□ 0.79
PNKP-220ENST00000627232 OGG1O15527 345 aa19.99■□□□□ 0.79
PNKP-220ENST00000627232 RGS5O15539 181 aa19.99■□□□□ 0.79
PNKP-220ENST00000627232 F13BP05160 661 aa19.99■□□□□ 0.79
PNKP-220ENST00000627232 CD1AP06126 327 aa19.99■□□□□ 0.79
PNKP-220ENST00000627232 CD8BP10966 210 aa19.99■□□□□ 0.79
PNKP-220ENST00000627232 TGM1P22735 817 aa19.99■□□□□ 0.79
PNKP-220ENST00000627232 MSX1P28360 303 aa19.99■□□□□ 0.79
PNKP-220ENST00000627232 C1orf140Q5VVS0 124 aa19.99■□□□□ 0.79
PNKP-220ENST00000627232 POMZP3Q6PJE2 187 aa19.99■□□□□ 0.79
PNKP-220ENST00000627232 ARL9Q6T311 187 aa19.99■□□□□ 0.79
PNKP-220ENST00000627232 FAM198BQ6UWH4 519 aa19.99■□□□□ 0.79
PNKP-220ENST00000627232 EGFL6Q8IUX8 553 aa19.99■□□□□ 0.79
PNKP-220ENST00000627232 OR51L1Q8NGJ5 315 aa19.99■□□□□ 0.79
PNKP-220ENST00000627232 ZNRF4Q8WWF5 429 aa19.99■□□□□ 0.79
PNKP-220ENST00000627232 ASB15Q8WXK1 588 aa19.99■□□□□ 0.79
PNKP-220ENST00000627232 RPRD1BQ9NQG5 326 aaKnown RBP19.99■□□□□ 0.79
PNKP-220ENST00000627232 ABCB10Q9NRK6 738 aa19.99■□□□□ 0.79
PNKP-220ENST00000627232 COL27A1Q8IZC6 1860 aaPredicted RBP19.99■□□□□ 0.79
PNKP-220ENST00000627232 TNFSF12-TNFSF13A0A0A6YY99 330 aa19.98■□□□□ 0.79
PNKP-220ENST00000627232 B4E171 279 aa19.98■□□□□ 0.79
PNKP-220ENST00000627232 E9PI62 339 aa19.98■□□□□ 0.79
PNKP-220ENST00000627232 TBX1O43435 398 aa19.98■□□□□ 0.79
PNKP-220ENST00000627232 OR2T1O43869 369 aa19.98■□□□□ 0.79
PNKP-220ENST00000627232 AHSA1O95433 338 aa19.98■□□□□ 0.79
PNKP-220ENST00000627232 RENP00797 406 aa19.98■□□□□ 0.79
PNKP-220ENST00000627232 FBXO45P0C2W1 286 aa19.98■□□□□ 0.79
PNKP-220ENST00000627232 CCL4P13236 92 aa19.98■□□□□ 0.79
PNKP-220ENST00000627232 CFL1P23528 166 aaKnown RBP19.98■□□□□ 0.79
PNKP-220ENST00000627232 NAA10P41227 235 aaPredicted RBP19.98■□□□□ 0.79
PNKP-220ENST00000627232 TSPAN7P41732 249 aa19.98■□□□□ 0.79
PNKP-220ENST00000627232 MTNR1BP49286 362 aa19.98■□□□□ 0.79
PNKP-220ENST00000627232 GBX2P52951 348 aaPredicted RBP19.98■□□□□ 0.79
PNKP-220ENST00000627232 PCOLCEQ15113 449 aa19.98■□□□□ 0.79
PNKP-220ENST00000627232 LPAL2Q16609 132 aa19.98■□□□□ 0.79
PNKP-220ENST00000627232 MESTQ5EB52 335 aa19.98■□□□□ 0.79
PNKP-220ENST00000627232 C1QL3Q5VWW1 255 aa19.98■□□□□ 0.79
PNKP-220ENST00000627232 MS4A15Q8N5U1 240 aa19.98■□□□□ 0.79
PNKP-220ENST00000627232 OR6K6Q8NGW6 343 aa19.98■□□□□ 0.79
PNKP-220ENST00000627232 ELP5Q8TE02 316 aa19.98■□□□□ 0.79
PNKP-220ENST00000627232 MR1Q95460 341 aa19.98■□□□□ 0.79
PNKP-220ENST00000627232 SNX18Q96RF0 628 aa19.98■□□□□ 0.79
PNKP-220ENST00000627232 SDHAF3Q9NRP4 125 aa19.98■□□□□ 0.79
PNKP-220ENST00000627232 TAS2R5Q9NYW4 299 aa19.98■□□□□ 0.79
PNKP-220ENST00000627232 ST6GALNAC2Q9UJ37 374 aa19.98■□□□□ 0.79
PNKP-220ENST00000627232 IGLV3-32A0A0A0MS00 114 aa19.97■□□□□ 0.79
PNKP-220ENST00000627232 FLRT2O43155 660 aa19.97■□□□□ 0.79
PNKP-220ENST00000627232 SELENOFO60613 162 aa19.97■□□□□ 0.79
PNKP-220ENST00000627232 PRKCAP17252 672 aa19.97■□□□□ 0.79
PNKP-220ENST00000627232 CCKBRP32239 447 aa19.97■□□□□ 0.79
PNKP-220ENST00000627232 PYCR1P32322 319 aa19.97■□□□□ 0.79
PNKP-220ENST00000627232 APOBEC1P41238 236 aaKnown RBP19.97■□□□□ 0.79
PNKP-220ENST00000627232 TGM4P49221 684 aa19.97■□□□□ 0.79
PNKP-220ENST00000627232 ZNF517Q6ZMY9 492 aaPredicted RBP19.97■□□□□ 0.79
PNKP-220ENST00000627232 SLC16A9Q7RTY1 509 aa19.97■□□□□ 0.79
PNKP-220ENST00000627232 OR2T4Q8NH00 348 aa19.97■□□□□ 0.79
PNKP-220ENST00000627232 SMAP2Q8WU79 429 aaPredicted RBP19.97■□□□□ 0.79
PNKP-220ENST00000627232 DEFB126Q9BYW3 111 aa19.97■□□□□ 0.79
PNKP-220ENST00000627232 SMOC1Q9H4F8 434 aa19.97■□□□□ 0.79
PNKP-220ENST00000627232 INIPQ9NRY2 104 aa19.97■□□□□ 0.79
PNKP-220ENST00000627232 NCDNQ9UBB6 729 aa19.97■□□□□ 0.79
PNKP-220ENST00000627232 ZNF346Q9UL40 294 aaKnown RBP19.97■□□□□ 0.79
PNKP-220ENST00000627232 PCDHGA5Q9Y5G8 931 aa19.97■□□□□ 0.79
PNKP-220ENST00000627232 ETV2O00321 342 aaPredicted RBP19.97■□□□□ 0.79
PNKP-220ENST00000627232 GDF9O60383 454 aa19.97■□□□□ 0.79
PNKP-220ENST00000627232 DXOO77932 396 aaKnown RBP19.97■□□□□ 0.79
PNKP-220ENST00000627232 HCCSP53701 268 aa19.97■□□□□ 0.79
PNKP-220ENST00000627232 E2F1Q01094 437 aa19.97■□□□□ 0.79
PNKP-220ENST00000627232 CCDC58Q4VC31 144 aa19.97■□□□□ 0.79
PNKP-220ENST00000627232 TP53I3Q53FA7 332 aa19.97■□□□□ 0.79
PNKP-220ENST00000627232 DDI2Q5TDH0 399 aa19.97■□□□□ 0.79
PNKP-220ENST00000627232 LAX1Q8IWV1 398 aa19.97■□□□□ 0.79
PNKP-220ENST00000627232 GHDCQ8N2G8 530 aa19.97■□□□□ 0.79
PNKP-220ENST00000627232 SNX33Q8WV41 574 aa19.97■□□□□ 0.79
PNKP-220ENST00000627232 ATOH1Q92858 354 aaPredicted RBP19.97■□□□□ 0.79
PNKP-220ENST00000627232 PGLYRP3Q96LB9 341 aa19.97■□□□□ 0.79
PNKP-220ENST00000627232 ZNF700Q9H0M5 742 aa19.97■□□□□ 0.79
PNKP-220ENST00000627232 ARRDC1-AS1Q9H2J1 176 aa19.97■□□□□ 0.79
PNKP-220ENST00000627232 SP140LQ9H930 580 aa19.97■□□□□ 0.79
PNKP-220ENST00000627232 SLC39A1Q9NY26 324 aa19.97■□□□□ 0.79
PNKP-220ENST00000627232 CPAMD8Q8IZJ3 1885 aa19.96■□□□□ 0.79
PNKP-220ENST00000627232 SERPINI2O75830 405 aa19.96■□□□□ 0.79
PNKP-220ENST00000627232 WISP1O95388 367 aa19.96■□□□□ 0.79
PNKP-220ENST00000627232 IGHMP01871 453 aa19.96■□□□□ 0.79
PNKP-220ENST00000627232 MAP2K6P52564 334 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms