RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 NKAIN2Q5VXU1 208 aa11.82□□□□□ -0.52
MSH6-215ENST00000622629 CCDC36Q8IYA8 594 aa11.82□□□□□ -0.52
MSH6-215ENST00000622629 RCBTB1Q8NDN9 531 aa11.82□□□□□ -0.52
MSH6-215ENST00000622629 OR56B4Q8NH76 319 aa11.82□□□□□ -0.52
MSH6-215ENST00000622629 DEFB126Q9BYW3 111 aa11.82□□□□□ -0.52
MSH6-215ENST00000622629 CD93Q9NPY3 652 aa11.82□□□□□ -0.52
MSH6-215ENST00000622629 DOCK4Q8N1I0 1966 aa11.82□□□□□ -0.52
MSH6-215ENST00000622629 A0A1W2PPV9 198 aa11.82□□□□□ -0.52
MSH6-215ENST00000622629 VSTM2BA6NLU5 285 aa11.82□□□□□ -0.52
MSH6-215ENST00000622629 DGCR2P98153 550 aa11.82□□□□□ -0.52
MSH6-215ENST00000622629 RASGEF1BQ0VAM2 473 aa11.82□□□□□ -0.52
MSH6-215ENST00000622629 EFR3AQ14156 821 aa11.82□□□□□ -0.52
MSH6-215ENST00000622629 CCDC58Q4VC31 144 aa11.82□□□□□ -0.52
MSH6-215ENST00000622629 RNASE10Q5GAN6 216 aaKnown RBP11.82□□□□□ -0.52
MSH6-215ENST00000622629 TMEM201Q5SNT2 666 aa11.82□□□□□ -0.52
MSH6-215ENST00000622629 KIAA0895LQ68EN5 471 aa11.82□□□□□ -0.52
MSH6-215ENST00000622629 SLC6A19Q695T7 634 aa11.82□□□□□ -0.52
MSH6-215ENST00000622629 FAM46BQ96A09 425 aa11.82□□□□□ -0.52
MSH6-215ENST00000622629 TCTN2Q96GX1 697 aa11.82□□□□□ -0.52
MSH6-215ENST00000622629 OR2M2Q96R28 347 aa11.82□□□□□ -0.52
MSH6-215ENST00000622629 ARHGDIGQ99819 225 aa11.82□□□□□ -0.52
MSH6-215ENST00000622629 TCEAL2Q9H3H9 227 aaPredicted RBP11.82□□□□□ -0.52
MSH6-215ENST00000622629 METTL8Q9H825 291 aaKnown RBP11.82□□□□□ -0.52
MSH6-215ENST00000622629 CUTCQ9NTM9 273 aa11.82□□□□□ -0.52
MSH6-215ENST00000622629 FBXL4Q9UKA2 621 aa11.82□□□□□ -0.52
MSH6-215ENST00000622629 MRPS2Q9Y399 296 aaKnown RBP11.82□□□□□ -0.52
MSH6-215ENST00000622629 NPFFR2Q9Y5X5 522 aa11.82□□□□□ -0.52
MSH6-215ENST00000622629 PSMB1P20618 241 aaKnown RBP11.82□□□□□ -0.52
MSH6-215ENST00000622629 VEGFCP49767 419 aa11.82□□□□□ -0.52
MSH6-215ENST00000622629 LTBQ06643 244 aa11.82□□□□□ -0.52
MSH6-215ENST00000622629 KDM8Q8N371 416 aa11.82□□□□□ -0.52
MSH6-215ENST00000622629 BARHL1Q9BZE3 327 aa11.82□□□□□ -0.52
MSH6-215ENST00000622629 ISYNA1Q9NPH2 558 aa11.82□□□□□ -0.52
MSH6-215ENST00000622629 TAS2R8Q9NYW2 309 aa11.82□□□□□ -0.52
MSH6-215ENST00000622629 TMEM221A6NGB7 291 aa11.81□□□□□ -0.52
MSH6-215ENST00000622629 DISC1C4P0D8 188 aa11.81□□□□□ -0.52
MSH6-215ENST00000622629 ZNF217O75362 1048 aa11.81□□□□□ -0.52
MSH6-215ENST00000622629 EIF4EP06730 217 aaKnown RBP11.81□□□□□ -0.52
MSH6-215ENST00000622629 SDHBP21912 280 aa11.81□□□□□ -0.52
MSH6-215ENST00000622629 CSNK1EP49674 416 aaKnown RBP11.81□□□□□ -0.52
MSH6-215ENST00000622629 GLO1Q04760 184 aa11.81□□□□□ -0.52
MSH6-215ENST00000622629 DUSP2Q05923 314 aa11.81□□□□□ -0.52
MSH6-215ENST00000622629 SPOCK1Q08629 439 aa11.81□□□□□ -0.52
MSH6-215ENST00000622629 FGL2Q14314 439 aa11.81□□□□□ -0.52
MSH6-215ENST00000622629 ZMYND11Q15326 602 aa11.81□□□□□ -0.52
MSH6-215ENST00000622629 LIPNQ5VXI9 398 aa11.81□□□□□ -0.52
MSH6-215ENST00000622629 SLC25A24Q6NUK1 477 aa11.81□□□□□ -0.52
MSH6-215ENST00000622629 DPY19L2P2Q6ZN68 376 aa11.81□□□□□ -0.52
MSH6-215ENST00000622629 BEST3Q8N1M1 668 aa11.81□□□□□ -0.52
MSH6-215ENST00000622629 DUSP19Q8WTR2 217 aa11.81□□□□□ -0.52
MSH6-215ENST00000622629 LPAR4Q99677 370 aa11.81□□□□□ -0.52
MSH6-215ENST00000622629 PTGES2Q9H7Z7 377 aa11.81□□□□□ -0.52
MSH6-215ENST00000622629 LIN7BQ9HAP6 207 aa11.81□□□□□ -0.52
MSH6-215ENST00000622629 RAB3DO95716 219 aa11.81□□□□□ -0.52
MSH6-215ENST00000622629 SRMP19623 302 aa11.81□□□□□ -0.52
MSH6-215ENST00000622629 ITGA3P26006 1051 aa11.81□□□□□ -0.52
MSH6-215ENST00000622629 SFTPDP35247 375 aa11.81□□□□□ -0.52
MSH6-215ENST00000622629 SLC6A8P48029 635 aa11.81□□□□□ -0.52
MSH6-215ENST00000622629 OR7A5Q15622 319 aa11.81□□□□□ -0.52
MSH6-215ENST00000622629 SLC25A44Q96H78 314 aaPredicted RBP11.81□□□□□ -0.52
MSH6-215ENST00000622629 PRRG4Q9BZD6 226 aa11.81□□□□□ -0.52
MSH6-215ENST00000622629 SLC6A15Q9H2J7 730 aa11.81□□□□□ -0.52
MSH6-215ENST00000622629 GSKIPQ9P0R6 139 aa11.81□□□□□ -0.52
MSH6-215ENST00000622629 EFCAB7A8K855 629 aa11.81□□□□□ -0.52
MSH6-215ENST00000622629 SLC22A5O76082 557 aa11.81□□□□□ -0.52
MSH6-215ENST00000622629 EMDP50402 254 aa11.81□□□□□ -0.52
MSH6-215ENST00000622629 SLC25A35Q3KQZ1 300 aa11.81□□□□□ -0.52
MSH6-215ENST00000622629 C1QTNF12Q5T7M4 302 aa11.81□□□□□ -0.52
MSH6-215ENST00000622629 TMEM205Q6UW68 189 aa11.81□□□□□ -0.52
MSH6-215ENST00000622629 KIRREL2Q6UWL6 708 aa11.81□□□□□ -0.52
MSH6-215ENST00000622629 DNAAF1Q8NEP3 725 aa11.81□□□□□ -0.52
MSH6-215ENST00000622629 GCDHQ92947 438 aaPredicted RBP11.81□□□□□ -0.52
MSH6-215ENST00000622629 HCAR1Q9BXC0 346 aa11.81□□□□□ -0.52
MSH6-215ENST00000622629 NEUROG3Q9Y4Z2 214 aa11.81□□□□□ -0.52
MSH6-215ENST00000622629 PHYHO14832 338 aa11.8□□□□□ -0.52
MSH6-215ENST00000622629 UTS2O95399 124 aa11.8□□□□□ -0.52
MSH6-215ENST00000622629 ENDOUP21128 410 aaKnown RBP11.8□□□□□ -0.52
MSH6-215ENST00000622629 HLA-DMAP28067 261 aa11.8□□□□□ -0.52
MSH6-215ENST00000622629 CRYBA2P53672 197 aa11.8□□□□□ -0.52
MSH6-215ENST00000622629 ARTNQ5T4W7 220 aa11.8□□□□□ -0.52
MSH6-215ENST00000622629 THSD4Q6ZMP0 1018 aa11.8□□□□□ -0.52
MSH6-215ENST00000622629 CA13Q8N1Q1 262 aa11.8□□□□□ -0.52
MSH6-215ENST00000622629 MORN4Q8NDC4 146 aa11.8□□□□□ -0.52
MSH6-215ENST00000622629 C16orf52Q8NHV5 167 aa11.8□□□□□ -0.52
MSH6-215ENST00000622629 ATF6BQ99941 703 aa11.8□□□□□ -0.52
MSH6-215ENST00000622629 ZNF304Q9HCX3 659 aa11.8□□□□□ -0.52
MSH6-215ENST00000622629 C2orf42Q9NWW7 574 aa11.8□□□□□ -0.52
MSH6-215ENST00000622629 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.8□□□□□ -0.52
MSH6-215ENST00000622629 ZNF593O00488 134 aaPredicted RBP11.8□□□□□ -0.52
MSH6-215ENST00000622629 GOSR2O14653 212 aa11.8□□□□□ -0.52
MSH6-215ENST00000622629 ZNF208O43345 1280 aa11.8□□□□□ -0.52
MSH6-215ENST00000622629 HCRTR1O43613 425 aa11.8□□□□□ -0.52
MSH6-215ENST00000622629 NARSO43776 548 aaKnown RBP11.8□□□□□ -0.52
MSH6-215ENST00000622629 KLK3P07288 261 aaPredicted RBP11.8□□□□□ -0.52
MSH6-215ENST00000622629 RBM34P42696 430 aaKnown RBP11.8□□□□□ -0.52
MSH6-215ENST00000622629 ACTBP60709 375 aa11.8□□□□□ -0.52
MSH6-215ENST00000622629 ACTG1P63261 375 aa11.8□□□□□ -0.52
MSH6-215ENST00000622629 KCNAB1Q14722 419 aa11.8□□□□□ -0.52
MSH6-215ENST00000622629 FAM69AQ5T7M9 428 aa11.8□□□□□ -0.52
MSH6-215ENST00000622629 SPERTQ8NA61 448 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms