RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 PPCDCQ96CD2 204 aa7.3□□□□□ -1.24
VPS11-209ENST00000622309 R3HDM4Q96D70 268 aa7.3□□□□□ -1.24
VPS11-209ENST00000622309 ECHDC3Q96DC8 303 aa7.3□□□□□ -1.24
VPS11-209ENST00000622309 FUBP3Q96I24 572 aaKnown RBP eCLIP7.3□□□□□ -1.24
VPS11-209ENST00000622309 ADGRE3Q9BY15 652 aa7.3□□□□□ -1.24
VPS11-209ENST00000622309 SLITRK2Q9H156 845 aa7.3□□□□□ -1.24
VPS11-209ENST00000622309 FN3KRPQ9HA64 309 aa7.3□□□□□ -1.24
VPS11-209ENST00000622309 PLEKHA1Q9HB21 404 aa7.3□□□□□ -1.24
VPS11-209ENST00000622309 ACKR4Q9NPB9 350 aa7.3□□□□□ -1.24
VPS11-209ENST00000622309 PIN4Q9Y237 131 aaKnown RBP7.3□□□□□ -1.24
VPS11-209ENST00000622309 SCN1AP35498 2009 aa7.3□□□□□ -1.24
VPS11-209ENST00000622309 H7BY64 318 aa7.3□□□□□ -1.24
VPS11-209ENST00000622309 FFAR1O14842 300 aa7.3□□□□□ -1.24
VPS11-209ENST00000622309 PPP1R2P9O14990 202 aa7.3□□□□□ -1.24
VPS11-209ENST00000622309 BCAT2O15382 392 aaPredicted RBP7.3□□□□□ -1.24
VPS11-209ENST00000622309 EPHX1P07099 455 aa7.3□□□□□ -1.24
VPS11-209ENST00000622309 TPT1P13693 172 aaKnown RBP7.3□□□□□ -1.24
VPS11-209ENST00000622309 MYOGP15173 224 aa7.3□□□□□ -1.24
VPS11-209ENST00000622309 AMD1P17707 334 aa7.3□□□□□ -1.24
VPS11-209ENST00000622309 MSX1P28360 303 aa7.3□□□□□ -1.24
VPS11-209ENST00000622309 LIM2P55344 173 aa7.3□□□□□ -1.24
VPS11-209ENST00000622309 CCL23P55773 120 aa7.3□□□□□ -1.24
VPS11-209ENST00000622309 CACNG1Q06432 222 aa7.3□□□□□ -1.24
VPS11-209ENST00000622309 DDX39BQ13838 428 aaKnown RBP7.3□□□□□ -1.24
VPS11-209ENST00000622309 ODF4Q2M2E3 257 aa7.3□□□□□ -1.24
VPS11-209ENST00000622309 OLFML2AQ68BL7 652 aa7.3□□□□□ -1.24
VPS11-209ENST00000622309 SBSNQ6UWP8 590 aa7.3□□□□□ -1.24
VPS11-209ENST00000622309 VRK3Q8IV63 474 aa7.3□□□□□ -1.24
VPS11-209ENST00000622309 EID2Q8N6I1 236 aa7.3□□□□□ -1.24
VPS11-209ENST00000622309 FAM216AQ8WUB2 273 aa7.3□□□□□ -1.24
VPS11-209ENST00000622309 UTP23Q9BRU9 249 aaKnown RBP7.3□□□□□ -1.24
VPS11-209ENST00000622309 MFRPQ9BY79 579 aa7.3□□□□□ -1.24
VPS11-209ENST00000622309 SLC6A16Q9GZN6 736 aa7.3□□□□□ -1.24
VPS11-209ENST00000622309 RGCCQ9H4X1 137 aa7.3□□□□□ -1.24
VPS11-209ENST00000622309 TUBA4BQ9H853 241 aa7.3□□□□□ -1.24
VPS11-209ENST00000622309 TRIM36Q9NQ86 728 aa7.3□□□□□ -1.24
VPS11-209ENST00000622309 POT1Q9NUX5 634 aa7.3□□□□□ -1.24
VPS11-209ENST00000622309 A0A0G2JK05 382 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 C7orf77A4D0Y5 90 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 YY2O15391 372 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 DLEU1O43261 78 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 STK16O75716 305 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 CBR3O75828 277 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 CD79AP11912 226 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 BMP7P18075 431 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 ATF1P18846 271 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 DCTDP32321 178 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 PDZD11Q5EBL8 140 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 ATXN7L2Q5T6C5 722 aaPredicted RBP7.29□□□□□ -1.24
VPS11-209ENST00000622309 FAM46CQ5VWP2 391 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 GPR137CQ8N3F9 429 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 C1orf216Q8TAB5 229 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 DUSP19Q8WTR2 217 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 NOL4LQ96MY1 436 aaPredicted RBP7.29□□□□□ -1.24
VPS11-209ENST00000622309 AMDHD1Q96NU7 426 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 MTERF1Q99551 399 aaKnown RBP7.29□□□□□ -1.24
VPS11-209ENST00000622309 S100A13Q99584 98 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 ZNF350Q9GZX5 532 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 RNF39Q9H2S5 420 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 PRO3102Q9H379 93 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 TNFSF18Q9UNG2 199 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 SIP14410 1827 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 EDDM13A0A1B0GTR0 161 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 ANKRD20A5PA0PJZ0 165 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 IFITM10A6NMD0 228 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 GPR89AB7ZAQ6 455 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 MKRN2OSH3BPM6 223 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 GPR182O15218 404 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 FLRT2O43155 660 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 HSPA12AO43301 675 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 MMP2P08253 660 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 ITGA5P08648 1049 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 GPR89BP0CG08 455 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 DAOP14920 347 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 IGFBP6P24592 240 aaPredicted RBP7.29□□□□□ -1.24
VPS11-209ENST00000622309 CEACAM6P40199 344 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 SLC6A11P48066 632 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 MECP2P51608 486 aaKnown RBP7.29□□□□□ -1.24
VPS11-209ENST00000622309 TOMM34Q15785 309 aaPredicted RBP7.29□□□□□ -1.24
VPS11-209ENST00000622309 ZNF630Q2M218 657 aaPredicted RBP7.29□□□□□ -1.24
VPS11-209ENST00000622309 UBE2NLQ5JXB2 153 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 CTSL3PQ5NE16 218 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 HIST2H3PS2Q5TEC6 136 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 C11orf87Q6NUJ2 197 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 SLC36A1Q7Z2H8 476 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 TECPR1Q7Z6L1 1165 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 FJX1Q86VR8 437 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 CMTM4Q8IZR5 234 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 ABHD4Q8TB40 342 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 OR8D1Q8WZ84 308 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 MALSU1Q96EH3 234 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 AKR1E2Q96JD6 320 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 SEMA3CQ99985 751 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 MICU1Q9BPX6 476 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 SLC35A5Q9BS91 424 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 ISG20L2Q9H9L3 353 aaKnown RBP7.29□□□□□ -1.24
VPS11-209ENST00000622309 DOK5Q9P104 306 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 GULP1Q9UBP9 304 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 KPTNQ9Y664 436 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 C1orf226A1L170 272 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms