RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 Q96M85 177 aa8.59□□□□□ -1.03
PDPN-212ENST00000621990 GFI1Q99684 422 aa8.59□□□□□ -1.03
PDPN-212ENST00000621990 TMEM246Q9BRR3 403 aa8.59□□□□□ -1.03
PDPN-212ENST00000621990 BEX2Q9BXY8 128 aa8.59□□□□□ -1.03
PDPN-212ENST00000621990 NXF5Q9H1B4 397 aaKnown RBP8.59□□□□□ -1.03
PDPN-212ENST00000621990 ZNF576Q9H609 170 aa8.59□□□□□ -1.03
PDPN-212ENST00000621990 NANSQ9NR45 359 aa8.59□□□□□ -1.03
PDPN-212ENST00000621990 PLSCR3Q9NRY6 295 aa8.59□□□□□ -1.03
PDPN-212ENST00000621990 ZNF275Q9NSD4 429 aaPredicted RBP8.59□□□□□ -1.03
PDPN-212ENST00000621990 CAMK2AQ9UQM7 478 aa8.59□□□□□ -1.03
PDPN-212ENST00000621990 ZNF281Q9Y2X9 895 aa8.59□□□□□ -1.03
PDPN-212ENST00000621990 SNRPBP14678 240 aaKnown RBP8.59□□□□□ -1.03
PDPN-212ENST00000621990 SRMP19623 302 aa8.59□□□□□ -1.03
PDPN-212ENST00000621990 RAB25P57735 213 aa8.59□□□□□ -1.03
PDPN-212ENST00000621990 NANOS3P60323 173 aaKnown RBP8.59□□□□□ -1.03
PDPN-212ENST00000621990 RACK1P63244 317 aaKnown RBP8.59□□□□□ -1.03
PDPN-212ENST00000621990 LTBQ06643 244 aa8.59□□□□□ -1.03
PDPN-212ENST00000621990 ALG10Q5BKT4 473 aa8.59□□□□□ -1.03
PDPN-212ENST00000621990 Q5BKY6 102 aa8.59□□□□□ -1.03
PDPN-212ENST00000621990 UBE2NLQ5JXB2 153 aa8.59□□□□□ -1.03
PDPN-212ENST00000621990 ASB18Q6ZVZ8 466 aa8.59□□□□□ -1.03
PDPN-212ENST00000621990 TIGD4Q8IY51 512 aa8.59□□□□□ -1.03
PDPN-212ENST00000621990 C7orf57Q8NEG2 295 aa8.59□□□□□ -1.03
PDPN-212ENST00000621990 OR6K6Q8NGW6 343 aa8.59□□□□□ -1.03
PDPN-212ENST00000621990 LILRB4Q8NHJ6 448 aa8.59□□□□□ -1.03
PDPN-212ENST00000621990 RGP1Q92546 391 aaPredicted RBP8.59□□□□□ -1.03
PDPN-212ENST00000621990 SCMH1Q96GD3 660 aa8.59□□□□□ -1.03
PDPN-212ENST00000621990 LPAR4Q99677 370 aa8.59□□□□□ -1.03
PDPN-212ENST00000621990 GTPBP2Q9BX10 602 aaKnown RBP8.59□□□□□ -1.03
PDPN-212ENST00000621990 LAT2Q9GZY6 243 aa8.59□□□□□ -1.03
PDPN-212ENST00000621990 RXFP3Q9NSD7 469 aa8.59□□□□□ -1.03
PDPN-212ENST00000621990 CUTCQ9NTM9 273 aa8.59□□□□□ -1.03
PDPN-212ENST00000621990 MCUBQ9NWR8 336 aa8.59□□□□□ -1.03
PDPN-212ENST00000621990 ING3Q9NXR8 418 aa8.59□□□□□ -1.03
PDPN-212ENST00000621990 A0A1B0GVC2 190 aa8.58□□□□□ -1.04
PDPN-212ENST00000621990 OR6C70A6NIJ9 312 aa8.58□□□□□ -1.04
PDPN-212ENST00000621990 A6NIN4 97 aa8.58□□□□□ -1.04
PDPN-212ENST00000621990 CENPBD1B2RD01 187 aa8.58□□□□□ -1.04
PDPN-212ENST00000621990 TMEM150CB9EJG8 249 aa8.58□□□□□ -1.04
PDPN-212ENST00000621990 AIPO00170 330 aa8.58□□□□□ -1.04
PDPN-212ENST00000621990 TO15178 435 aa8.58□□□□□ -1.04
PDPN-212ENST00000621990 ZFPL1O95159 310 aa8.58□□□□□ -1.04
PDPN-212ENST00000621990 ABHD16AO95870 558 aa8.58□□□□□ -1.04
PDPN-212ENST00000621990 HPGDP15428 266 aa8.58□□□□□ -1.04
PDPN-212ENST00000621990 SLC6A8P48029 635 aa8.58□□□□□ -1.04
PDPN-212ENST00000621990 DCAF7P61962 342 aa8.58□□□□□ -1.04
PDPN-212ENST00000621990 MRPL28Q13084 256 aaKnown RBP8.58□□□□□ -1.04
PDPN-212ENST00000621990 NTRK2Q16620 822 aa8.58□□□□□ -1.04
PDPN-212ENST00000621990 C14orf28Q4W4Y0 310 aa8.58□□□□□ -1.04
PDPN-212ENST00000621990 LYPD4Q6UWN0 246 aa8.58□□□□□ -1.04
PDPN-212ENST00000621990 SYT9Q86SS6 491 aa8.58□□□□□ -1.04
PDPN-212ENST00000621990 JAZF1Q86VZ6 243 aa8.58□□□□□ -1.04
PDPN-212ENST00000621990 GATSQ8NAP1 163 aa8.58□□□□□ -1.04
PDPN-212ENST00000621990 LSM14AQ8ND56 463 aaKnown RBP8.58□□□□□ -1.04
PDPN-212ENST00000621990 PHOSPHO1Q8TCT1 267 aa8.58□□□□□ -1.04
PDPN-212ENST00000621990 ADAMTS14Q8WXS8 1223 aa8.58□□□□□ -1.04
PDPN-212ENST00000621990 MAP6Q96JE9 813 aa8.58□□□□□ -1.04
PDPN-212ENST00000621990 DERL3Q96Q80 235 aa8.58□□□□□ -1.04
PDPN-212ENST00000621990 C7orf50Q9BRJ6 194 aaKnown RBP8.58□□□□□ -1.04
PDPN-212ENST00000621990 GON7Q9BXV9 100 aa8.58□□□□□ -1.04
PDPN-212ENST00000621990 TPSD1Q9BZJ3 242 aa8.58□□□□□ -1.04
PDPN-212ENST00000621990 GHITMQ9H3K2 345 aa8.58□□□□□ -1.04
PDPN-212ENST00000621990 NOX4Q9NPH5 578 aa8.58□□□□□ -1.04
PDPN-212ENST00000621990 BRD7Q9NPI1 651 aa8.58□□□□□ -1.04
PDPN-212ENST00000621990 COPZ2Q9P299 210 aa8.58□□□□□ -1.04
PDPN-212ENST00000621990 MRTO4Q9UKD2 239 aaKnown RBP8.58□□□□□ -1.04
PDPN-212ENST00000621990 BOLA1Q9Y3E2 137 aa8.58□□□□□ -1.04
PDPN-212ENST00000621990 MAU2Q9Y6X3 613 aa8.58□□□□□ -1.04
PDPN-212ENST00000621990 MYO15AQ9UKN7 3530 aa8.58□□□□□ -1.04
PDPN-212ENST00000621990 A0A0A6YYJ9 748 aa8.58□□□□□ -1.04
PDPN-212ENST00000621990 A0A0B4J203 849 aa8.58□□□□□ -1.04
PDPN-212ENST00000621990 A0A1W2PPK0 400 aa8.58□□□□□ -1.04
PDPN-212ENST00000621990 A0A1W2PQD3 144 aa8.58□□□□□ -1.04
PDPN-212ENST00000621990 TCRBV16S1A1N1A0A5B0 115 aa8.58□□□□□ -1.04
PDPN-212ENST00000621990 IFITM5A6NNB3 132 aa8.58□□□□□ -1.04
PDPN-212ENST00000621990 BLOC1S5-TXNDC5H3BN57 136 aa8.58□□□□□ -1.04
PDPN-212ENST00000621990 PDCD5O14737 125 aa8.58□□□□□ -1.04
PDPN-212ENST00000621990 PRKNO60260 465 aaPredicted RBP8.58□□□□□ -1.04
PDPN-212ENST00000621990 UPK3AO75631 287 aa8.58□□□□□ -1.04
PDPN-212ENST00000621990 PSMB10P40306 273 aa8.58□□□□□ -1.04
PDPN-212ENST00000621990 EFNA3P52797 238 aa8.58□□□□□ -1.04
PDPN-212ENST00000621990 RAG2P55895 527 aa8.58□□□□□ -1.04
PDPN-212ENST00000621990 ELAVL1Q15717 326 aaKnown RBP8.58□□□□□ -1.04
PDPN-212ENST00000621990 UTS2BQ765I0 119 aa8.58□□□□□ -1.04
PDPN-212ENST00000621990 CDC20BQ86Y33 519 aa8.58□□□□□ -1.04
PDPN-212ENST00000621990 PLCZ1Q86YW0 608 aa8.58□□□□□ -1.04
PDPN-212ENST00000621990 TMEM151BQ8IW70 566 aa8.58□□□□□ -1.04
PDPN-212ENST00000621990 DTX3Q8N9I9 347 aa8.58□□□□□ -1.04
PDPN-212ENST00000621990 SMIM4Q8WVI0 70 aa8.58□□□□□ -1.04
PDPN-212ENST00000621990 KTI12Q96EK9 354 aaPredicted RBP8.58□□□□□ -1.04
PDPN-212ENST00000621990 MNTQ99583 582 aa8.58□□□□□ -1.04
PDPN-212ENST00000621990 FKRPQ9H9S5 495 aa8.58□□□□□ -1.04
PDPN-212ENST00000621990 GALNT9Q9HCQ5 603 aa8.58□□□□□ -1.04
PDPN-212ENST00000621990 SEMA5BQ9P283 1151 aa8.58□□□□□ -1.04
PDPN-212ENST00000621990 NUBP2Q9Y5Y2 271 aa8.58□□□□□ -1.04
PDPN-212ENST00000621990 C4orf47A7E2U8 309 aa8.57□□□□□ -1.04
PDPN-212ENST00000621990 OR2B3O76000 313 aa8.57□□□□□ -1.04
PDPN-212ENST00000621990 TACSTD2P09758 323 aa8.57□□□□□ -1.04
PDPN-212ENST00000621990 POU3F3P20264 500 aaPredicted RBP8.57□□□□□ -1.04
PDPN-212ENST00000621990 SRP9P49458 86 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms