RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 SLCO2B1O94956 709 aa9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 H2AFB2P0C5Z0 115 aa9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 OR8U9P0C7N5 309 aa9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 CD34P28906 385 aa9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 EPHA5P54756 1037 aa9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 DPTQ07507 201 aa9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 TRIP6Q15654 476 aaKnown RBP9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 MSMO1Q15800 293 aa9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 NPSR1Q6W5P4 371 aa9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 C8orf44Q96CB5 159 aa9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 KATNB1Q9BVA0 655 aa9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 SNX11Q9Y5W9 270 aa9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 CNTRLQ7Z7A1 2325 aa9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 EMX1Q04741 257 aaPredicted RBP9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 SPCS2Q15005 226 aa9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 SLC48A1Q6P1K1 146 aa9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 PODNL1Q6PEZ8 512 aa9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 SLC35D2Q76EJ3 337 aa9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 GDPD3Q7L5L3 318 aa9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 ZNF740Q8NDX6 193 aa9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 SNAPC3Q92966 411 aa9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 TAAR8Q969N4 342 aa9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 NLKQ9UBE8 527 aa9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 TRAV17A0A0B4J275 112 aa9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 PRAMEF27A3QJZ7 478 aa9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 K7ESM1 405 aa9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 DSCR3O14972 297 aa9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 IGHV3-9P01782 118 aa9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 TRHRP34981 398 aaPredicted RBP9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 SLC19A1P41440 591 aa9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 GPR3P46089 330 aa9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 SPOCK1Q08629 439 aa9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 PGGHGQ32M88 737 aa9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 AGAP6Q5VW22 663 aa9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 FBXL6Q8N531 539 aa9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 CHDHQ8NE62 594 aaPredicted RBP9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 POC1BQ8TC44 478 aa9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 ZDHHC16Q969W1 377 aa9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 DPCDQ9BVM2 203 aaPredicted RBP9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 NAA50Q9GZZ1 169 aaKnown RBP9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 NDRG4Q9ULP0 352 aaKnown RBP9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 OR51B4Q9Y5P0 310 aa9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 UBR2Q8IWV8 1755 aa9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 LMO7DNF2Z398 122 aa9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 EIF4E2O60573 245 aaKnown RBP9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 FZD7O75084 574 aa9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 NDUFB7P17568 137 aa9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 EMP3P54852 163 aa9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 LIM2P55344 173 aa9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 TFF2Q03403 129 aa9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 ZNF169Q14929 603 aaPredicted RBP9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 KCTD20Q7Z5Y7 419 aa9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 DTWD2Q8NBA8 298 aa9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 CADM4Q8NFZ8 388 aa9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 MVB12AQ96EY5 273 aa9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 C1QTNF6Q9BXI9 259 aa9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 CLMPQ9H6B4 373 aa9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 AK6Q9Y3D8 172 aaKnown RBP9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 TNS1Q9HBL0 1735 aaKnown RBP9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 ZNF593O00488 134 aaPredicted RBP9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 SELEP16581 610 aa9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 PTAFRP25105 342 aa9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 AQP2P41181 271 aa9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 CCL7P80098 99 aa9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 CCDC58Q4VC31 144 aa9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 SBSNQ6UWP8 590 aa9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 CMIPQ8IY22 773 aa9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 PM20D2Q8IYS1 436 aa9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 MAML2Q8IZL2 1156 aaPredicted RBP9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 RHOXF1Q8NHV9 184 aa9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 MZB1Q8WU39 189 aa9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 UPRTQ96BW1 309 aa9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 CMSS1Q9BQ75 279 aaKnown RBP9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 DDX31Q9H8H2 851 aaKnown RBP9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 ZNF286AQ9HBT8 521 aa9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 GFOD1Q9NXC2 390 aa9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 ARNTLO00327 626 aa9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 RGS11O94810 467 aa9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 VAMP5O95183 116 aa9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 NSA2O95478 260 aaKnown RBP9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 ZNF26P17031 533 aaPredicted RBP9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 PCGF3Q3KNV8 242 aa9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 AKR1C8PQ5T2L2 129 aa9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 PGAP1Q75T13 922 aa9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 MEPCEQ7L2J0 689 aaKnown RBP9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 GRINAQ7Z429 371 aa9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 COMTD1Q86VU5 262 aa9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 DMBX1Q8NFW5 382 aa9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 OR13C2Q8NGS9 318 aa9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 BCL7CQ8WUZ0 217 aaPredicted RBP9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 UBL7Q96S82 380 aaPredicted RBP9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 CRLF2Q9HC73 371 aa9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 HRASLSQ9HDD0 168 aa9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 YBX2Q9Y2T7 364 aaKnown RBP9.05□□□□□ -0.96
CLTCL1-211ENST00000621271 IL9P15248 144 aa9.04□□□□□ -0.96
CLTCL1-211ENST00000621271 GABRG2P18507 467 aa9.04□□□□□ -0.96
CLTCL1-211ENST00000621271 TAS2R31P59538 309 aa9.04□□□□□ -0.96
CLTCL1-211ENST00000621271 SNRPD2P62316 118 aaKnown RBP9.04□□□□□ -0.96
CLTCL1-211ENST00000621271 LILRA3Q8N6C8 439 aaPredicted RBP9.04□□□□□ -0.96
CLTCL1-211ENST00000621271 ZNF454Q8N9F8 522 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms