RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 SPDL1Q96EA4 605 aa19.24■□□□□ 0.67
SRRT-218ENST00000620394 ZNF317Q96PQ6 595 aaPredicted RBP19.24■□□□□ 0.67
SRRT-218ENST00000620394 ALKBH3Q96Q83 286 aaPredicted RBP19.24■□□□□ 0.67
SRRT-218ENST00000620394 EBF4Q9BQW3 602 aa19.24■□□□□ 0.67
SRRT-218ENST00000620394 C1QTNF6Q9BXI9 259 aa19.24■□□□□ 0.67
SRRT-218ENST00000620394 CSF3P09919 207 aa19.23■□□□□ 0.67
SRRT-218ENST00000620394 PNMTP11086 282 aa19.23■□□□□ 0.67
SRRT-218ENST00000620394 PPIBP23284 216 aaKnown RBP19.23■□□□□ 0.67
SRRT-218ENST00000620394 FABP6P51161 128 aa19.23■□□□□ 0.67
SRRT-218ENST00000620394 HIKESHIQ53FT3 197 aa19.23■□□□□ 0.67
SRRT-218ENST00000620394 GCNT6Q5T4J0 391 aa19.23■□□□□ 0.67
SRRT-218ENST00000620394 DHRS4L2Q6PKH6 230 aa19.23■□□□□ 0.67
SRRT-218ENST00000620394 C5orf46Q6UWT4 87 aa19.23■□□□□ 0.67
SRRT-218ENST00000620394 COMTD1Q86VU5 262 aa19.23■□□□□ 0.67
SRRT-218ENST00000620394 C10orf111Q8N326 155 aa19.23■□□□□ 0.67
SRRT-218ENST00000620394 ZNF525Q8N782 197 aa19.23■□□□□ 0.67
SRRT-218ENST00000620394 OR1K1Q8NGR3 316 aa19.23■□□□□ 0.67
SRRT-218ENST00000620394 LRRC8CQ8TDW0 803 aa19.23■□□□□ 0.67
SRRT-218ENST00000620394 LINC00470Q9BZP3 86 aa19.23■□□□□ 0.67
SRRT-218ENST00000620394 VAPAQ9P0L0 249 aa19.23■□□□□ 0.67
SRRT-218ENST00000620394 SLAMF8Q9P0V8 285 aa19.23■□□□□ 0.67
SRRT-218ENST00000620394 RCE1Q9Y256 329 aa19.23■□□□□ 0.67
SRRT-218ENST00000620394 C5orf58C9J3I9 102 aa19.22■□□□□ 0.67
SRRT-218ENST00000620394 ZNF587BE7ETH6 402 aa19.22■□□□□ 0.67
SRRT-218ENST00000620394 PAX7P23759 505 aa19.22■□□□□ 0.67
SRRT-218ENST00000620394 HTR2AP28223 471 aa19.22■□□□□ 0.67
SRRT-218ENST00000620394 HOXC5Q00444 222 aa19.22■□□□□ 0.67
SRRT-218ENST00000620394 RAB35Q15286 201 aa19.22■□□□□ 0.67
SRRT-218ENST00000620394 TBRG1Q3YBR2 411 aa19.22■□□□□ 0.67
SRRT-218ENST00000620394 LINGO2Q7L985 606 aa19.22■□□□□ 0.67
SRRT-218ENST00000620394 CCDC167Q9P0B6 97 aa19.22■□□□□ 0.67
SRRT-218ENST00000620394 B3GAT1Q9P2W7 334 aa19.22■□□□□ 0.67
SRRT-218ENST00000620394 ARPC4-TTLL3A0A0A6YYG9 625 aa19.21■□□□□ 0.67
SRRT-218ENST00000620394 ATP6V1G2-DDX39BF2Z307 99 aa19.21■□□□□ 0.67
SRRT-218ENST00000620394 NR5A2O00482 541 aa19.21■□□□□ 0.67
SRRT-218ENST00000620394 LMX1BO60663 402 aa19.21■□□□□ 0.67
SRRT-218ENST00000620394 ZNF432O94892 652 aa19.21■□□□□ 0.67
SRRT-218ENST00000620394 IGHV4-31P0DP07 118 aa19.21■□□□□ 0.67
SRRT-218ENST00000620394 RPS5P46782 204 aaKnown RBP19.21■□□□□ 0.67
SRRT-218ENST00000620394 ATP4BP51164 291 aa19.21■□□□□ 0.67
SRRT-218ENST00000620394 LGALS3BPQ08380 585 aa19.21■□□□□ 0.67
SRRT-218ENST00000620394 PAGE3Q5JUK9 113 aa19.21■□□□□ 0.67
SRRT-218ENST00000620394 REEP3Q6NUK4 255 aa19.21■□□□□ 0.67
SRRT-218ENST00000620394 NFKBIDQ8NI38 313 aa19.21■□□□□ 0.67
SRRT-218ENST00000620394 MAGEE2Q8TD90 523 aaPredicted RBP19.21■□□□□ 0.67
SRRT-218ENST00000620394 STON2Q8WXE9 905 aa19.21■□□□□ 0.67
SRRT-218ENST00000620394 PROX1Q92786 737 aa19.21■□□□□ 0.67
SRRT-218ENST00000620394 KTI12Q96EK9 354 aaPredicted RBP19.21■□□□□ 0.67
SRRT-218ENST00000620394 ATP6V1G3Q96LB4 118 aa19.21■□□□□ 0.67
SRRT-218ENST00000620394 NELFAQ9H3P2 528 aa19.21■□□□□ 0.67
SRRT-218ENST00000620394 TMEM38AQ9H6F2 299 aa19.21■□□□□ 0.67
SRRT-218ENST00000620394 CRNNQ9UBG3 495 aaPredicted RBP19.21■□□□□ 0.67
SRRT-218ENST00000620394 MALRD1Q5VYJ5 2156 aa19.2■□□□□ 0.66
SRRT-218ENST00000620394 A0A1B0GWA3 101 aa19.2■□□□□ 0.66
SRRT-218ENST00000620394 LGI1O95970 557 aa19.2■□□□□ 0.66
SRRT-218ENST00000620394 GPX2P18283 190 aa19.2■□□□□ 0.66
SRRT-218ENST00000620394 IGFBP5P24593 272 aa19.2■□□□□ 0.66
SRRT-218ENST00000620394 APOBEC3AP31941 199 aaPredicted RBP19.2■□□□□ 0.66
SRRT-218ENST00000620394 SH3BGRP55822 239 aaPredicted RBP19.2■□□□□ 0.66
SRRT-218ENST00000620394 CDK6Q00534 326 aa19.2■□□□□ 0.66
SRRT-218ENST00000620394 C3orf36Q3SXR2 165 aa19.2■□□□□ 0.66
SRRT-218ENST00000620394 FAM69AQ5T7M9 428 aa19.2■□□□□ 0.66
SRRT-218ENST00000620394 NIPAL3Q6P499 406 aa19.2■□□□□ 0.66
SRRT-218ENST00000620394 ANKK1Q8NFD2 765 aa19.2■□□□□ 0.66
SRRT-218ENST00000620394 C10orf105Q8TEF2 133 aa19.2■□□□□ 0.66
SRRT-218ENST00000620394 DNAJA4Q8WW22 397 aaPredicted RBP19.2■□□□□ 0.66
SRRT-218ENST00000620394 BCL2L2Q92843 193 aaPredicted RBP19.2■□□□□ 0.66
SRRT-218ENST00000620394 SPATA5L1Q9BVQ7 753 aa19.2■□□□□ 0.66
SRRT-218ENST00000620394 IKZF5Q9H5V7 419 aa19.2■□□□□ 0.66
SRRT-218ENST00000620394 TESQ9UGI8 421 aaKnown RBP19.2■□□□□ 0.66
SRRT-218ENST00000620394 KCNS2Q9ULS6 477 aa19.2■□□□□ 0.66
SRRT-218ENST00000620394 CORO2BQ9UQ03 480 aa19.2■□□□□ 0.66
SRRT-218ENST00000620394 ATP23Q9Y6H3 246 aa19.2■□□□□ 0.66
SRRT-218ENST00000620394 IGKV1D-42A0A075B6H8 117 aa19.19■□□□□ 0.66
SRRT-218ENST00000620394 IGHV1-18A0A0C4DH31 117 aa19.19■□□□□ 0.66
SRRT-218ENST00000620394 RPL36A-HNRNPH2H7BZ11 118 aa19.19■□□□□ 0.66
SRRT-218ENST00000620394 OR2T1O43869 369 aa19.19■□□□□ 0.66
SRRT-218ENST00000620394 UPK3AO75631 287 aa19.19■□□□□ 0.66
SRRT-218ENST00000620394 KRT33AO76009 404 aa19.19■□□□□ 0.66
SRRT-218ENST00000620394 CDH2P19022 906 aaPredicted RBP19.19■□□□□ 0.66
SRRT-218ENST00000620394 USF1P22415 310 aaPredicted RBP19.19■□□□□ 0.66
SRRT-218ENST00000620394 GTF2E2P29084 291 aaKnown RBP19.19■□□□□ 0.66
SRRT-218ENST00000620394 GZMKP49863 264 aa19.19■□□□□ 0.66
SRRT-218ENST00000620394 AQP5P55064 265 aa19.19■□□□□ 0.66
SRRT-218ENST00000620394 SQLEQ14534 574 aa19.19■□□□□ 0.66
SRRT-218ENST00000620394 TTMPQ5BVD1 217 aa19.19■□□□□ 0.66
SRRT-218ENST00000620394 FAM91A1Q658Y4 838 aa19.19■□□□□ 0.66
SRRT-218ENST00000620394 FAM166AQ6J272 317 aa19.19■□□□□ 0.66
SRRT-218ENST00000620394 KRT73Q86Y46 540 aa19.19■□□□□ 0.66
SRRT-218ENST00000620394 ADPRHL1Q8NDY3 354 aa19.19■□□□□ 0.66
SRRT-218ENST00000620394 SLC38A4Q969I6 547 aa19.19■□□□□ 0.66
SRRT-218ENST00000620394 SLC25A36Q96CQ1 311 aa19.19■□□□□ 0.66
SRRT-218ENST00000620394 OXGR1Q96P68 337 aa19.19■□□□□ 0.66
SRRT-218ENST00000620394 SLC38A2Q96QD8 506 aa19.19■□□□□ 0.66
SRRT-218ENST00000620394 KATNB1Q9BVA0 655 aa19.19■□□□□ 0.66
SRRT-218ENST00000620394 MOV10Q9HCE1 1003 aaKnown RBP19.19■□□□□ 0.66
SRRT-218ENST00000620394 RPS6KB2Q9UBS0 482 aa19.19■□□□□ 0.66
SRRT-218ENST00000620394 SEC14L4Q9UDX3 406 aa19.19■□□□□ 0.66
SRRT-218ENST00000620394 MOKQ9UQ07 419 aa19.19■□□□□ 0.66
SRRT-218ENST00000620394 LOC102725191A0A1B0GVB3 256 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms