RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 NGBQ9NPG2 151 aa21.94■■□□□ 1.1
PMS1-220ENST00000618056 CCM2LQ9NUG4 571 aaPredicted RBP21.94■■□□□ 1.1
PMS1-220ENST00000618056 SEC14L4Q9UDX3 406 aa21.94■■□□□ 1.1
PMS1-220ENST00000618056 CORINQ9Y5Q5 1042 aa21.94■■□□□ 1.1
PMS1-220ENST00000618056 MED13LQ71F56 2210 aa21.93■■□□□ 1.1
PMS1-220ENST00000618056 LOC102725191A0A1B0GVB3 256 aa21.93■■□□□ 1.1
PMS1-220ENST00000618056 BGLAPP02818 100 aa21.93■■□□□ 1.1
PMS1-220ENST00000618056 THY1P04216 161 aa21.93■■□□□ 1.1
PMS1-220ENST00000618056 ITGA5P08648 1049 aa21.93■■□□□ 1.1
PMS1-220ENST00000618056 LRRC23Q53EV4 343 aaPredicted RBP21.93■■□□□ 1.1
PMS1-220ENST00000618056 CYBRD1Q53TN4 286 aa21.93■■□□□ 1.1
PMS1-220ENST00000618056 TSPO2Q5TGU0 170 aa21.93■■□□□ 1.1
PMS1-220ENST00000618056 SEZ6L2Q6UXD5 910 aa21.93■■□□□ 1.1
PMS1-220ENST00000618056 H1FNTQ75WM6 255 aaPredicted RBP21.93■■□□□ 1.1
PMS1-220ENST00000618056 SCAIQ8N9R8 606 aa21.93■■□□□ 1.1
PMS1-220ENST00000618056 OXGR1Q96P68 337 aa21.93■■□□□ 1.1
PMS1-220ENST00000618056 TMEM204Q9BSN7 226 aa21.93■■□□□ 1.1
PMS1-220ENST00000618056 POLR2J2Q9GZM3 115 aaKnown RBP21.93■■□□□ 1.1
PMS1-220ENST00000618056 POLR2J3Q9H1A7 115 aaKnown RBP21.93■■□□□ 1.1
PMS1-220ENST00000618056 B3GAT1Q9P2W7 334 aa21.93■■□□□ 1.1
PMS1-220ENST00000618056 UPB1Q9UBR1 384 aa21.93■■□□□ 1.1
PMS1-220ENST00000618056 ATE1O95260 518 aa21.92■■□□□ 1.1
PMS1-220ENST00000618056 WDR88Q6ZMY6 472 aa21.92■■□□□ 1.1
PMS1-220ENST00000618056 ANKS4BQ8N8V4 417 aa21.92■■□□□ 1.1
PMS1-220ENST00000618056 PLPPR2Q96GM1 343 aa21.92■■□□□ 1.1
PMS1-220ENST00000618056 FOXC2Q99958 501 aa21.92■■□□□ 1.1
PMS1-220ENST00000618056 ZNF426Q9BUY5 554 aa21.92■■□□□ 1.1
PMS1-220ENST00000618056 AMBRA1Q9C0C7 1298 aa21.92■■□□□ 1.1
PMS1-220ENST00000618056 ALG2Q9H553 416 aa21.92■■□□□ 1.1
PMS1-220ENST00000618056 ABCD2Q9UBJ2 740 aa21.92■■□□□ 1.1
PMS1-220ENST00000618056 ARL2BPQ9Y2Y0 163 aa21.92■■□□□ 1.1
PMS1-220ENST00000618056 VPS13CQ709C8 3753 aa21.92■■□□□ 1.1
PMS1-220ENST00000618056 OR6C65A6NJZ3 312 aa21.91■■□□□ 1.1
PMS1-220ENST00000618056 OR5H1A6NKK0 313 aa21.91■■□□□ 1.1
PMS1-220ENST00000618056 RAD51DO75771 328 aa21.91■■□□□ 1.1
PMS1-220ENST00000618056 ZNF43P17038 809 aa21.91■■□□□ 1.1
PMS1-220ENST00000618056 FOXG1P55316 489 aaPredicted RBP21.91■■□□□ 1.1
PMS1-220ENST00000618056 SELENOWP63302 87 aa21.91■■□□□ 1.1
PMS1-220ENST00000618056 LTBQ06643 244 aa21.91■■□□□ 1.1
PMS1-220ENST00000618056 PPA1Q15181 289 aa21.91■■□□□ 1.1
PMS1-220ENST00000618056 STK11Q15831 433 aa21.91■■□□□ 1.1
PMS1-220ENST00000618056 OR7E24Q6IFN5 339 aa21.91■■□□□ 1.1
PMS1-220ENST00000618056 SPNS3Q6ZMD2 512 aa21.91■■□□□ 1.1
PMS1-220ENST00000618056 KDM8Q8N371 416 aa21.91■■□□□ 1.1
PMS1-220ENST00000618056 MUCL1Q96DR8 90 aa21.91■■□□□ 1.1
PMS1-220ENST00000618056 MUS81Q96NY9 551 aa21.91■■□□□ 1.1
PMS1-220ENST00000618056 SLC19A3Q9BZV2 496 aa21.91■■□□□ 1.1
PMS1-220ENST00000618056 CXXC4Q9H2H0 198 aa21.91■■□□□ 1.1
PMS1-220ENST00000618056 GMPR2Q9P2T1 348 aaKnown RBP21.91■■□□□ 1.1
PMS1-220ENST00000618056 SLC7A7Q9UM01 511 aa21.91■■□□□ 1.1
PMS1-220ENST00000618056 RCE1Q9Y256 329 aa21.91■■□□□ 1.1
PMS1-220ENST00000618056 CIB4A0PJX0 185 aa21.9■■□□□ 1.1
PMS1-220ENST00000618056 MT-ATP6P00846 226 aa21.9■■□□□ 1.1
PMS1-220ENST00000618056 TNFRSF1BP20333 461 aa21.9■■□□□ 1.1
PMS1-220ENST00000618056 ART1P52961 327 aa21.9■■□□□ 1.1
PMS1-220ENST00000618056 KEAP1Q14145 624 aa21.9■■□□□ 1.1
PMS1-220ENST00000618056 C1orf162Q8NEQ5 155 aaPredicted RBP21.9■■□□□ 1.1
PMS1-220ENST00000618056 MOGAT1Q96PD6 335 aa21.9■■□□□ 1.1
PMS1-220ENST00000618056 ASPNQ9BXN1 380 aa21.9■■□□□ 1.1
PMS1-220ENST00000618056 MRPL39Q9NYK5 338 aaKnown RBP21.9■■□□□ 1.1
PMS1-220ENST00000618056 MPGP29372 298 aa21.9■■□□□ 1.1
PMS1-220ENST00000618056 GSK3BP49841 420 aa21.9■■□□□ 1.1
PMS1-220ENST00000618056 SELENOPP49908 381 aa21.9■■□□□ 1.1
PMS1-220ENST00000618056 GABRA6Q16445 453 aa21.9■■□□□ 1.1
PMS1-220ENST00000618056 NCMAPQ5T1S8 102 aa21.9■■□□□ 1.1
PMS1-220ENST00000618056 ALKBH2Q6NS38 261 aa21.9■■□□□ 1.1
PMS1-220ENST00000618056 TTC33Q6PID6 262 aaPredicted RBP21.9■■□□□ 1.1
PMS1-220ENST00000618056 ABHD12BQ7Z5M8 362 aaPredicted RBP21.9■■□□□ 1.1
PMS1-220ENST00000618056 LZICQ8WZA0 190 aa21.9■■□□□ 1.1
PMS1-220ENST00000618056 ALPK1Q96QP1 1244 aa21.9■■□□□ 1.1
PMS1-220ENST00000618056 PRSS27Q9BQR3 290 aa21.9■■□□□ 1.1
PMS1-220ENST00000618056 ESRP2Q9H6T0 727 aaKnown RBP21.9■■□□□ 1.1
PMS1-220ENST00000618056 MS4A18H0YCH9 400 aa21.89■■□□□ 1.09
PMS1-220ENST00000618056 ZNF432O94892 652 aa21.89■■□□□ 1.09
PMS1-220ENST00000618056 OR5F1O95221 314 aa21.89■■□□□ 1.09
PMS1-220ENST00000618056 CD53P19397 219 aa21.89■■□□□ 1.09
PMS1-220ENST00000618056 PTNP21246 168 aa21.89■■□□□ 1.09
PMS1-220ENST00000618056 CBLP22681 906 aa21.89■■□□□ 1.09
PMS1-220ENST00000618056 PSME3P61289 254 aa21.89■■□□□ 1.09
PMS1-220ENST00000618056 TGFBR3Q03167 851 aa21.89■■□□□ 1.09
PMS1-220ENST00000618056 MS4A18Q3C1V0 323 aa21.89■■□□□ 1.09
PMS1-220ENST00000618056 C1QTNF12Q5T7M4 302 aa21.89■■□□□ 1.09
PMS1-220ENST00000618056 NIPAL3Q6P499 406 aa21.89■■□□□ 1.09
PMS1-220ENST00000618056 ZNF704Q6ZNC4 412 aaPredicted RBP21.89■■□□□ 1.09
PMS1-220ENST00000618056 C17orf78Q8N4C9 275 aa21.89■■□□□ 1.09
PMS1-220ENST00000618056 BOD1Q96IK1 185 aa21.89■■□□□ 1.09
PMS1-220ENST00000618056 LRRC37BQ96QE4 947 aa21.89■■□□□ 1.09
PMS1-220ENST00000618056 LINC00470Q9BZP3 86 aa21.89■■□□□ 1.09
PMS1-220ENST00000618056 CXCR6O00574 342 aa21.88■■□□□ 1.09
PMS1-220ENST00000618056 TRAF3IP2O43734 574 aaPredicted RBP21.88■■□□□ 1.09
PMS1-220ENST00000618056 DCTN3O75935 186 aa21.88■■□□□ 1.09
PMS1-220ENST00000618056 NQO1P15559 274 aaKnown RBP21.88■■□□□ 1.09
PMS1-220ENST00000618056 OR1E2P47887 323 aa21.88■■□□□ 1.09
PMS1-220ENST00000618056 CLDN17P56750 224 aa21.88■■□□□ 1.09
PMS1-220ENST00000618056 C1DQ13901 141 aaKnown RBP21.88■■□□□ 1.09
PMS1-220ENST00000618056 ACKR1Q16570 336 aa21.88■■□□□ 1.09
PMS1-220ENST00000618056 DEF8Q6ZN54 512 aa21.88■■□□□ 1.09
PMS1-220ENST00000618056 C20orf204Q6ZNR8 217 aa21.88■■□□□ 1.09
PMS1-220ENST00000618056 TPD52L3Q96J77 140 aa21.88■■□□□ 1.09
PMS1-220ENST00000618056 UBTD1Q9HAC8 227 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms