RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 CD38P28907 300 aa4.25□□□□□ -1.73
CHD9-221ENST00000615216 SIRPAP78324 504 aa4.25□□□□□ -1.73
CHD9-221ENST00000615216 SLC5A12Q1EHB4 618 aa4.25□□□□□ -1.73
CHD9-221ENST00000615216 Q499Y3 187 aa4.25□□□□□ -1.73
CHD9-221ENST00000615216 SFRP5Q5T4F7 317 aa4.25□□□□□ -1.73
CHD9-221ENST00000615216 MOB3CQ70IA8 216 aa4.25□□□□□ -1.73
CHD9-221ENST00000615216 SLAMF9Q96A28 289 aa4.25□□□□□ -1.73
CHD9-221ENST00000615216 CAMK2AQ9UQM7 478 aa4.25□□□□□ -1.73
CHD9-221ENST00000615216 TMEM184BQ9Y519 407 aaPredicted RBP4.25□□□□□ -1.73
CHD9-221ENST00000615216 ZNF587BE7ETH6 402 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 H0YGG7 62 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 NUDT21O43809 227 aaKnown RBP4.24□□□□□ -1.73
CHD9-221ENST00000615216 SDC3O75056 442 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 SELEP16581 610 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 HLA-DMAP28067 261 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 HOXD12P35452 270 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 CASP3P42574 277 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 DAPP51397 102 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 RPS25P62851 125 aaKnown RBP4.24□□□□□ -1.73
CHD9-221ENST00000615216 CXADRP78310 365 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 POU3F1Q03052 451 aaPredicted RBP4.24□□□□□ -1.73
CHD9-221ENST00000615216 LYPD4Q6UWN0 246 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 DLK2Q6UY11 383 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 NPSR1Q6W5P4 371 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 ZNF761Q86XN6 746 aaPredicted RBP4.24□□□□□ -1.73
CHD9-221ENST00000615216 BPIFB2Q8N4F0 458 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 OR4N2Q8NGD1 307 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 SLC39A13Q96H72 371 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 CMSS1Q9BQ75 279 aaKnown RBP4.24□□□□□ -1.73
CHD9-221ENST00000615216 RBFOX1Q9NWB1 397 aaKnown RBP4.24□□□□□ -1.73
CHD9-221ENST00000615216 UGT2A1Q9Y4X1 527 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 C4orf47A7E2U8 309 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 PMS2P2O95744 297 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 PIPP12273 146 aaPredicted RBP4.24□□□□□ -1.73
CHD9-221ENST00000615216 CAMK2BQ13554 666 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 GLYR1Q49A26 553 aaPredicted RBP4.24□□□□□ -1.73
CHD9-221ENST00000615216 DCAF12Q5T6F0 453 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.24□□□□□ -1.731e-6■■■■■ 28.5
CHD9-221ENST00000615216 BPHLQ86WA6 291 aaPredicted RBP4.24□□□□□ -1.73
CHD9-221ENST00000615216 PPP1R3BQ86XI6 285 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 FRZBQ92765 325 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 WDR83Q9BRX9 315 aaKnown RBP4.24□□□□□ -1.73
CHD9-221ENST00000615216 OBP2BQ9NPH6 170 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 TXNL4BQ9NX01 149 aaKnown RBP4.24□□□□□ -1.73
CHD9-221ENST00000615216 NUP214P35658 2090 aaPredicted RBP4.24□□□□□ -1.73
CHD9-221ENST00000615216 OR52A4PA6NMU1 304 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 ZBTB42B2RXF5 422 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 ZNF593O00488 134 aaPredicted RBP4.24□□□□□ -1.73
CHD9-221ENST00000615216 CSO75390 466 aaKnown RBP4.24□□□□□ -1.73
CHD9-221ENST00000615216 ZNF254O75437 659 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 HOXA1P49639 335 aaPredicted RBP4.24□□□□□ -1.73
CHD9-221ENST00000615216 SLC14A1Q13336 389 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 PDLIM3Q53GG5 364 aaPredicted RBP4.24□□□□□ -1.73
CHD9-221ENST00000615216 MARCH8Q5T0T0 291 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 FAM180BQ6P0A1 224 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 SLC22A25Q6T423 547 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 ZNF836Q6ZNA1 936 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 PRR18Q8N4B5 295 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 VN1R2Q8NFZ6 395 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 OR1S2Q8NGQ3 325 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 ARRDC2Q8TBH0 407 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 HHIPQ96QV1 700 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 SAMD10Q9BYL1 202 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 ULBP2Q9BZM5 246 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 C20orf85Q9H1P6 137 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 KIR3DX1Q9H7L2 352 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 NECAP2Q9NVZ3 263 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 COL11A1P12107 1806 aaPredicted RBP4.24□□□□□ -1.73
CHD9-221ENST00000615216 UTS2O95399 124 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 HLA-HP01893 362 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 FOSL1P15407 271 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 RAB6AP20340 208 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 CTSCP53634 463 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 FAM189BP81408 668 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 DCDP81605 110 aaKnown RBP4.24□□□□□ -1.73
CHD9-221ENST00000615216 C17orf67Q0P5P2 114 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 ZNF266Q14584 549 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 KDM4DQ6B0I6 523 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 WDR5BQ86VZ2 330 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 ZFPM2Q8WW38 1151 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 ULBP3Q9BZM4 244 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 GCM1Q9NP62 436 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 STARD5Q9NSY2 213 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 SAGE1Q9NXZ1 904 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 OBP2AQ9NY56 170 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 MUTYHQ9UIF7 546 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 A0A1W2PPH5 198 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 NKX6-3A6NJ46 265 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 HSPB2A8KAH6 182 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 MCRIP1C9JLW8 97 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 B4GAT1O43505 415 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 FRS3O43559 492 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 SLC1A3P43003 542 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 KIAA1024LP59773 190 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 POU4F3Q15319 338 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 HSPB2Q16082 182 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 TMPRSS7Q7RTY8 843 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 NAA40Q86UY6 237 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 NLGN4XQ8N0W4 816 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 KDM8Q8N371 416 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms