RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 CDK5Q00535 292 aa7.19□□□□□ -1.26
PCDH9-205ENST00000614931 RPL18Q07020 188 aaKnown RBP7.19□□□□□ -1.26
PCDH9-205ENST00000614931 DBPQ10586 325 aaPredicted RBP7.19□□□□□ -1.26
PCDH9-205ENST00000614931 COX10Q12887 443 aa7.19□□□□□ -1.26
PCDH9-205ENST00000614931 SLC10A1Q14973 349 aa7.19□□□□□ -1.26
PCDH9-205ENST00000614931 PTGES3Q15185 160 aaKnown RBP7.19□□□□□ -1.26
PCDH9-205ENST00000614931 SGCBQ16585 318 aa7.19□□□□□ -1.26
PCDH9-205ENST00000614931 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.19□□□□□ -1.26
PCDH9-205ENST00000614931 RFX4Q33E94 735 aa7.19□□□□□ -1.26
PCDH9-205ENST00000614931 MS4A18Q3C1V0 323 aa7.19□□□□□ -1.26
PCDH9-205ENST00000614931 ZBED5Q49AG3 693 aa7.19□□□□□ -1.26
PCDH9-205ENST00000614931 CLEC12AQ5QGZ9 265 aa7.19□□□□□ -1.26
PCDH9-205ENST00000614931 SLX4IPQ5VYV7 408 aa7.19□□□□□ -1.26
PCDH9-205ENST00000614931 C12orf73Q69YU5 71 aa7.19□□□□□ -1.26
PCDH9-205ENST00000614931 VASNQ6EMK4 673 aa7.19□□□□□ -1.26
PCDH9-205ENST00000614931 ACSM5Q6NUN0 579 aa7.19□□□□□ -1.26
PCDH9-205ENST00000614931 SMARCD3Q6STE5 483 aa7.19□□□□□ -1.26
PCDH9-205ENST00000614931 C5orf46Q6UWT4 87 aa7.19□□□□□ -1.26
PCDH9-205ENST00000614931 NHLRC1Q6VVB1 395 aa7.19□□□□□ -1.26
PCDH9-205ENST00000614931 TMPPEQ6ZT21 453 aa7.19□□□□□ -1.26
PCDH9-205ENST00000614931 MAMDC2Q7Z304 686 aaPredicted RBP7.19□□□□□ -1.26
PCDH9-205ENST00000614931 OAFQ86UD1 273 aa7.19□□□□□ -1.26
PCDH9-205ENST00000614931 CDK20Q8IZL9 346 aa7.19□□□□□ -1.26
PCDH9-205ENST00000614931 DHRSXQ8N5I4 330 aa7.19□□□□□ -1.26
PCDH9-205ENST00000614931 CLDN22Q8N7P3 220 aa7.19□□□□□ -1.26
PCDH9-205ENST00000614931 TMEM99Q8N816 258 aa7.19□□□□□ -1.26
PCDH9-205ENST00000614931 OR5J2Q8NH18 312 aa7.19□□□□□ -1.26
PCDH9-205ENST00000614931 OR2V1Q8NHB1 315 aa7.19□□□□□ -1.26
PCDH9-205ENST00000614931 MFSD8Q8NHS3 518 aa7.19□□□□□ -1.26
PCDH9-205ENST00000614931 ABTB1Q969K4 478 aaPredicted RBP7.19□□□□□ -1.26
PCDH9-205ENST00000614931 UBE2FQ969M7 185 aa7.19□□□□□ -1.26
PCDH9-205ENST00000614931 ZNF570Q96NI8 536 aa7.19□□□□□ -1.26
PCDH9-205ENST00000614931 UCN2Q96RP3 112 aa7.19□□□□□ -1.26
PCDH9-205ENST00000614931 TSSK6Q9BXA6 273 aa7.19□□□□□ -1.26
PCDH9-205ENST00000614931 ZNF556Q9HAH1 456 aa7.19□□□□□ -1.26
PCDH9-205ENST00000614931 SLC25A19Q9HC21 320 aa7.19□□□□□ -1.26
PCDH9-205ENST00000614931 CHST11Q9NPF2 352 aa7.19□□□□□ -1.26
PCDH9-205ENST00000614931 KRCC1Q9NPI7 259 aaPredicted RBP7.19□□□□□ -1.26
PCDH9-205ENST00000614931 NANSQ9NR45 359 aa7.19□□□□□ -1.26
PCDH9-205ENST00000614931 SERINC1Q9NRX5 453 aa7.19□□□□□ -1.26
PCDH9-205ENST00000614931 ALKBH4Q9NXW9 302 aa7.19□□□□□ -1.26
PCDH9-205ENST00000614931 TAS2R5Q9NYW4 299 aa7.19□□□□□ -1.26
PCDH9-205ENST00000614931 IL20Q9NYY1 176 aa7.19□□□□□ -1.26
PCDH9-205ENST00000614931 AASSQ9UDR5 926 aa7.19□□□□□ -1.26
PCDH9-205ENST00000614931 ZNF229Q9UJW7 825 aa7.19□□□□□ -1.26
PCDH9-205ENST00000614931 NDRG4Q9ULP0 352 aaKnown RBP7.19□□□□□ -1.26
PCDH9-205ENST00000614931 NPIPA1Q9UND3 350 aa7.19□□□□□ -1.26
PCDH9-205ENST00000614931 HIF3AQ9Y2N7 669 aa7.19□□□□□ -1.26
PCDH9-205ENST00000614931 HDGFL3Q9Y3E1 203 aa7.19□□□□□ -1.26
PCDH9-205ENST00000614931 ORC6Q9Y5N6 252 aa7.19□□□□□ -1.26
PCDH9-205ENST00000614931 SPIN1Q9Y657 262 aaPredicted RBP7.19□□□□□ -1.26
PCDH9-205ENST00000614931 UTP20O75691 2785 aaKnown RBP7.19□□□□□ -1.26
PCDH9-205ENST00000614931 LRRK2Q5S007 2527 aa7.19□□□□□ -1.26
PCDH9-205ENST00000614931 USP9YO00507 2555 aaPredicted RBP7.18□□□□□ -1.26
PCDH9-205ENST00000614931 PHF3Q92576 2039 aaKnown RBP7.18□□□□□ -1.26
PCDH9-205ENST00000614931 HIVEP3Q5T1R4 2406 aa7.18□□□□□ -1.26
PCDH9-205ENST00000614931 IGHV3-15A0A0B4J1V0 119 aa7.18□□□□□ -1.26
PCDH9-205ENST00000614931 LOC100130705A0A1B0GUX0 176 aa7.18□□□□□ -1.26
PCDH9-205ENST00000614931 A0A1B0GVC2 190 aa7.18□□□□□ -1.26
PCDH9-205ENST00000614931 HTR3EA5X5Y0 456 aa7.18□□□□□ -1.26
PCDH9-205ENST00000614931 C11orf98E9PRG8 122 aa7.18□□□□□ -1.26
PCDH9-205ENST00000614931 H3BN98 237 aa7.18□□□□□ -1.26
PCDH9-205ENST00000614931 SULT2B1O00204 365 aa7.18□□□□□ -1.26
PCDH9-205ENST00000614931 PLPP3O14495 311 aa7.18□□□□□ -1.26
PCDH9-205ENST00000614931 BHLHE40O14503 412 aa7.18□□□□□ -1.26
PCDH9-205ENST00000614931 EIF1AYO14602 144 aaKnown RBP7.18□□□□□ -1.26
PCDH9-205ENST00000614931 IMPA2O14732 288 aa7.18□□□□□ -1.26
PCDH9-205ENST00000614931 BCKDKO14874 412 aa7.18□□□□□ -1.26
PCDH9-205ENST00000614931 SMAD9O15198 467 aaKnown RBP7.18□□□□□ -1.26
PCDH9-205ENST00000614931 HCN1O60741 890 aa7.18□□□□□ -1.26
PCDH9-205ENST00000614931 SLC2A10O95528 541 aa7.18□□□□□ -1.26
PCDH9-205ENST00000614931 PPP1R3DO95685 299 aa7.18□□□□□ -1.26
PCDH9-205ENST00000614931 PMS2P2O95744 297 aa7.18□□□□□ -1.26
PCDH9-205ENST00000614931 MT-ATP6P00846 226 aa7.18□□□□□ -1.26
PCDH9-205ENST00000614931 F13BP05160 661 aa7.18□□□□□ -1.26
PCDH9-205ENST00000614931 HLA-DOBP13765 273 aa7.18□□□□□ -1.26
PCDH9-205ENST00000614931 GGT2P36268 569 aa7.18□□□□□ -1.26
PCDH9-205ENST00000614931 SLC9A3P48764 834 aa7.18□□□□□ -1.26
PCDH9-205ENST00000614931 CLK1P49759 484 aaKnown RBP7.18□□□□□ -1.26
PCDH9-205ENST00000614931 MAP2K6P52564 334 aa7.18□□□□□ -1.26
PCDH9-205ENST00000614931 GINS1Q14691 196 aa7.18□□□□□ -1.26
PCDH9-205ENST00000614931 ZNF239Q16600 458 aaKnown RBP7.18□□□□□ -1.26
PCDH9-205ENST00000614931 PGGHGQ32M88 737 aa7.18□□□□□ -1.26
PCDH9-205ENST00000614931 ZNF691Q5VV52 312 aa7.18□□□□□ -1.26
PCDH9-205ENST00000614931 GFRALQ6UXV0 394 aa7.18□□□□□ -1.26
PCDH9-205ENST00000614931 NANOGNBQ7Z5D8 188 aa7.18□□□□□ -1.26
PCDH9-205ENST00000614931 CCDC103Q8IW40 242 aa7.18□□□□□ -1.26
PCDH9-205ENST00000614931 KDM8Q8N371 416 aa7.18□□□□□ -1.26
PCDH9-205ENST00000614931 OR10D3Q8NH80 312 aa7.18□□□□□ -1.26
PCDH9-205ENST00000614931 TEX47Q8TBZ9 253 aa7.18□□□□□ -1.26
PCDH9-205ENST00000614931 WDYHV1Q96HA8 205 aa7.18□□□□□ -1.26
PCDH9-205ENST00000614931 ZNF845Q96IR2 970 aaPredicted RBP7.18□□□□□ -1.26
PCDH9-205ENST00000614931 HRASLS5Q96KN8 279 aa7.18□□□□□ -1.26
PCDH9-205ENST00000614931 GPX7Q96SL4 187 aaPredicted RBP7.18□□□□□ -1.26
PCDH9-205ENST00000614931 TIMP4Q99727 224 aa7.18□□□□□ -1.26
PCDH9-205ENST00000614931 TAPBPLQ9BX59 468 aa7.18□□□□□ -1.26
PCDH9-205ENST00000614931 ANKRD60Q9BZ19 345 aa7.18□□□□□ -1.26
PCDH9-205ENST00000614931 LDAHQ9H6V9 325 aa7.18□□□□□ -1.26
PCDH9-205ENST00000614931 TBC1D23Q9NUY8 699 aa7.18□□□□□ -1.26
PCDH9-205ENST00000614931 MRPL39Q9NYK5 338 aaKnown RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms