RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 SMIM19Q96E16 107 aa12.38□□□□□ -0.43
NEK3-205ENST00000610828 NEDD4LQ96PU5 975 aa12.38□□□□□ -0.43
NEK3-205ENST00000610828 PILRBQ9UKJ0 227 aa12.38□□□□□ -0.43
NEK3-205ENST00000610828 ZNF346Q9UL40 294 aaKnown RBP12.38□□□□□ -0.43
NEK3-205ENST00000610828 SLC6A5Q9Y345 797 aa12.38□□□□□ -0.43
NEK3-205ENST00000610828 IGHV5-10-1A0A0J9YXX1 117 aa12.37□□□□□ -0.43
NEK3-205ENST00000610828 A0A1W2PPK0 400 aa12.37□□□□□ -0.43
NEK3-205ENST00000610828 FAM25AB3EWG3 89 aa12.37□□□□□ -0.43
NEK3-205ENST00000610828 FAM25CB3EWG5 89 aa12.37□□□□□ -0.43
NEK3-205ENST00000610828 FAM25GB3EWG6 89 aa12.37□□□□□ -0.43
NEK3-205ENST00000610828 H7C1C5 153 aa12.37□□□□□ -0.43
NEK3-205ENST00000610828 PSMD9O00233 223 aa12.37□□□□□ -0.43
NEK3-205ENST00000610828 CDC40O60508 579 aaKnown RBP eCLIP12.37□□□□□ -0.43
NEK3-205ENST00000610828 SC5DO75845 299 aa12.37□□□□□ -0.43
NEK3-205ENST00000610828 WISP1O95388 367 aa12.37□□□□□ -0.43
NEK3-205ENST00000610828 PDGFBP01127 241 aaPredicted RBP12.37□□□□□ -0.43
NEK3-205ENST00000610828 GP1BBP13224 206 aa12.37□□□□□ -0.43
NEK3-205ENST00000610828 APEHP13798 732 aaKnown RBP12.37□□□□□ -0.43
NEK3-205ENST00000610828 EVX1P49640 407 aa12.37□□□□□ -0.43
NEK3-205ENST00000610828 GDI2P50395 445 aaKnown RBP12.37□□□□□ -0.43
NEK3-205ENST00000610828 OR10A3P58181 314 aa12.37□□□□□ -0.43
NEK3-205ENST00000610828 LCN6P62502 163 aa12.37□□□□□ -0.43
NEK3-205ENST00000610828 IL10RAQ13651 578 aa12.37□□□□□ -0.43
NEK3-205ENST00000610828 CDK5R1Q15078 307 aa12.37□□□□□ -0.43
NEK3-205ENST00000610828 P2RY14Q15391 338 aa12.37□□□□□ -0.43
NEK3-205ENST00000610828 LINC01590Q5TEZ4 76 aa12.37□□□□□ -0.43
NEK3-205ENST00000610828 C1QL3Q5VWW1 255 aa12.37□□□□□ -0.43
NEK3-205ENST00000610828 HBMQ6B0K9 141 aa12.37□□□□□ -0.43
NEK3-205ENST00000610828 ZNF511Q8NB15 262 aa12.37□□□□□ -0.43
NEK3-205ENST00000610828 SRA1Q9HD15 236 aaKnown RBP12.37□□□□□ -0.43
NEK3-205ENST00000610828 NCDNQ9UBB6 729 aa12.37□□□□□ -0.43
NEK3-205ENST00000610828 ADAM30Q9UKF2 790 aa12.37□□□□□ -0.43
NEK3-205ENST00000610828 CCDC163A0A0D9SF12 145 aa12.37□□□□□ -0.43
NEK3-205ENST00000610828 TRBV2A0A0J9YWF9 115 aa12.37□□□□□ -0.43
NEK3-205ENST00000610828 ANKRD34CP0C6C1 535 aa12.37□□□□□ -0.43
NEK3-205ENST00000610828 EDNRAP25101 427 aa12.37□□□□□ -0.43
NEK3-205ENST00000610828 PSMB10P40306 273 aa12.37□□□□□ -0.43
NEK3-205ENST00000610828 RFX2P48378 723 aa12.37□□□□□ -0.43
NEK3-205ENST00000610828 TPTEP56180 551 aa12.37□□□□□ -0.43
NEK3-205ENST00000610828 ANKRD37Q7Z713 158 aa12.37□□□□□ -0.43
NEK3-205ENST00000610828 PXKQ7Z7A4 578 aa12.37□□□□□ -0.43
NEK3-205ENST00000610828 Q8N402 240 aa12.37□□□□□ -0.43
NEK3-205ENST00000610828 APCDD1LQ8NCL9 501 aa12.37□□□□□ -0.43
NEK3-205ENST00000610828 OR4D9Q8NGE8 314 aa12.37□□□□□ -0.43
NEK3-205ENST00000610828 MAFAQ8NHW3 353 aaPredicted RBP12.37□□□□□ -0.43
NEK3-205ENST00000610828 DUSP19Q8WTR2 217 aa12.37□□□□□ -0.43
NEK3-205ENST00000610828 ACOT12Q8WYK0 555 aa12.37□□□□□ -0.43
NEK3-205ENST00000610828 RELTQ969Z4 430 aa12.37□□□□□ -0.43
NEK3-205ENST00000610828 SLC25A36Q96CQ1 311 aa12.37□□□□□ -0.43
NEK3-205ENST00000610828 ITPKCQ96DU7 683 aa12.37□□□□□ -0.43
NEK3-205ENST00000610828 TXNDC15Q96J42 360 aa12.37□□□□□ -0.43
NEK3-205ENST00000610828 TSPAN32Q96QS1 320 aa12.37□□□□□ -0.43
NEK3-205ENST00000610828 IER2Q9BTL4 223 aa12.37□□□□□ -0.43
NEK3-205ENST00000610828 FKRPQ9H9S5 495 aa12.37□□□□□ -0.43
NEK3-205ENST00000610828 RXFP3Q9NSD7 469 aa12.37□□□□□ -0.43
NEK3-205ENST00000610828 SUSD2Q9UGT4 822 aa12.37□□□□□ -0.43
NEK3-205ENST00000610828 RARRES3Q9UL19 164 aa12.37□□□□□ -0.43
NEK3-205ENST00000610828 PCNX3Q9H6A9 2034 aa12.36□□□□□ -0.43
NEK3-205ENST00000610828 IGLV3-12A0A075B6K2 115 aa12.36□□□□□ -0.43
NEK3-205ENST00000610828 OGG1O15527 345 aa12.36□□□□□ -0.43
NEK3-205ENST00000610828 FADS1O60427 444 aa12.36□□□□□ -0.43
NEK3-205ENST00000610828 SERPINA3P01011 423 aa12.36□□□□□ -0.43
NEK3-205ENST00000610828 CFIP05156 583 aa12.36□□□□□ -0.43
NEK3-205ENST00000610828 SLC2A2P11168 524 aaPredicted RBP12.36□□□□□ -0.43
NEK3-205ENST00000610828 P2RX1P51575 399 aa12.36□□□□□ -0.43
NEK3-205ENST00000610828 QPRTQ15274 297 aa12.36□□□□□ -0.43
NEK3-205ENST00000610828 MESTQ5EB52 335 aa12.36□□□□□ -0.43
NEK3-205ENST00000610828 SFXN4Q6P4A7 337 aa12.36□□□□□ -0.43
NEK3-205ENST00000610828 IL20RBQ6UXL0 311 aa12.36□□□□□ -0.43
NEK3-205ENST00000610828 EID2Q8N6I1 236 aa12.36□□□□□ -0.43
NEK3-205ENST00000610828 MRPL48Q96GC5 212 aaKnown RBP12.36□□□□□ -0.43
NEK3-205ENST00000610828 CCDC74BQ96LY2 380 aa12.36□□□□□ -0.43
NEK3-205ENST00000610828 PDCD1LG2Q9BQ51 273 aa12.36□□□□□ -0.43
NEK3-205ENST00000610828 NDEL1Q9GZM8 345 aa12.36□□□□□ -0.43
NEK3-205ENST00000610828 GAREM1Q9H706 876 aa12.36□□□□□ -0.43
NEK3-205ENST00000610828 PPP1R3EQ9H7J1 279 aa12.36□□□□□ -0.43
NEK3-205ENST00000610828 RASD1Q9Y272 281 aa12.36□□□□□ -0.43
NEK3-205ENST00000610828 NPFFR2Q9Y5X5 522 aa12.36□□□□□ -0.43
NEK3-205ENST00000610828 WDFY4Q6ZS81 3184 aa12.36□□□□□ -0.43
NEK3-205ENST00000610828 TRAV36DV7A0A075B6V5 113 aa12.36□□□□□ -0.43
NEK3-205ENST00000610828 OR6C70A6NIJ9 312 aa12.36□□□□□ -0.43
NEK3-205ENST00000610828 C11orf98E9PRG8 122 aa12.36□□□□□ -0.43
NEK3-205ENST00000610828 DCTN6O00399 190 aa12.36□□□□□ -0.43
NEK3-205ENST00000610828 SLC19A2O60779 497 aa12.36□□□□□ -0.43
NEK3-205ENST00000610828 IMPDH2P12268 514 aa12.36□□□□□ -0.43
NEK3-205ENST00000610828 ELK1P19419 428 aa12.36□□□□□ -0.43
NEK3-205ENST00000610828 SLC25A1P53007 311 aa12.36□□□□□ -0.43
NEK3-205ENST00000610828 DCDP81605 110 aaKnown RBP12.36□□□□□ -0.43
NEK3-205ENST00000610828 SQSTM1Q13501 440 aa12.36□□□□□ -0.43
NEK3-205ENST00000610828 TRIQKQ629K1 86 aa12.36□□□□□ -0.43
NEK3-205ENST00000610828 OR5M10Q6IEU7 315 aa12.36□□□□□ -0.43
NEK3-205ENST00000610828 RPL22L1Q6P5R6 122 aaKnown RBP12.36□□□□□ -0.43
NEK3-205ENST00000610828 METAP1DQ6UB28 335 aaPredicted RBP12.36□□□□□ -0.43
NEK3-205ENST00000610828 NUP54Q7Z3B4 507 aa12.36□□□□□ -0.43
NEK3-205ENST00000610828 AKAP14Q86UN6 197 aa12.36□□□□□ -0.43
NEK3-205ENST00000610828 TPRA1Q86W33 373 aa12.36□□□□□ -0.43
NEK3-205ENST00000610828 UBE2J2Q8N2K1 259 aa12.36□□□□□ -0.43
NEK3-205ENST00000610828 IL17RDQ8NFM7 739 aa12.36□□□□□ -0.43
NEK3-205ENST00000610828 METTL21AQ8WXB1 218 aa12.36□□□□□ -0.43
NEK3-205ENST00000610828 SOSTQ9BQB4 213 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms