RNA–Protein interactions for RNA: ENST00000610756.4

TCF3-219, Transcript of transcription factor 3, humanhuman

TSL 1 (best)

Gene TCF3, Length 1,343 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-219ENST00000610756 CLOCKO15516 846 aa16.95■□□□□ 0.3
TCF3-219ENST00000610756 ARHGEF9O43307 516 aa16.95■□□□□ 0.3
TCF3-219ENST00000610756 CHP2O43745 196 aa16.95■□□□□ 0.3
TCF3-219ENST00000610756 SELENOPP49908 381 aa16.95■□□□□ 0.3
TCF3-219ENST00000610756 LTBQ06643 244 aa16.95■□□□□ 0.3
TCF3-219ENST00000610756 RBM45Q8IUH3 476 aaKnown RBP16.95■□□□□ 0.3
TCF3-219ENST00000610756 OR52N5Q8NH56 324 aa16.95■□□□□ 0.3
TCF3-219ENST00000610756 ZNF417Q8TAU3 575 aa16.95■□□□□ 0.3
TCF3-219ENST00000610756 RADILQ96JH8 1075 aa16.95■□□□□ 0.3
TCF3-219ENST00000610756 ZNF587Q96SQ5 575 aaPredicted RBP16.95■□□□□ 0.3
TCF3-219ENST00000610756 NPAP1Q9NZP6 1156 aa16.95■□□□□ 0.3
TCF3-219ENST00000610756 SEC14L4Q9UDX3 406 aa16.95■□□□□ 0.3
TCF3-219ENST00000610756 MS4A18H0YCH9 400 aa16.94■□□□□ 0.3
TCF3-219ENST00000610756 ZNF432O94892 652 aa16.94■□□□□ 0.3
TCF3-219ENST00000610756 IFNA14P01570 189 aa16.94■□□□□ 0.3
TCF3-219ENST00000610756 BGLAPP02818 100 aa16.94■□□□□ 0.3
TCF3-219ENST00000610756 PAX1P15863 534 aa16.94■□□□□ 0.3
TCF3-219ENST00000610756 MS4A18Q3C1V0 323 aa16.94■□□□□ 0.3
TCF3-219ENST00000610756 ZNF672Q499Z4 452 aaPredicted RBP16.94■□□□□ 0.3
TCF3-219ENST00000610756 C9orf135Q5VTT2 229 aa16.94■□□□□ 0.3
TCF3-219ENST00000610756 NIPAL3Q6P499 406 aa16.94■□□□□ 0.3
TCF3-219ENST00000610756 PRSS57Q6UWY2 283 aa16.94■□□□□ 0.3
TCF3-219ENST00000610756 TMEM108Q6UXF1 575 aa16.94■□□□□ 0.3
TCF3-219ENST00000610756 SCAIQ8N9R8 606 aa16.94■□□□□ 0.3
TCF3-219ENST00000610756 WDR31Q8NA23 367 aa16.94■□□□□ 0.3
TCF3-219ENST00000610756 ADAMTS16Q8TE57 1224 aa16.94■□□□□ 0.3
TCF3-219ENST00000610756 LINC00470Q9BZP3 86 aa16.94■□□□□ 0.3
TCF3-219ENST00000610756 SLC17A5Q9NRA2 495 aa16.94■□□□□ 0.3
TCF3-219ENST00000610756 BAG5Q9UL15 447 aa16.94■□□□□ 0.3
TCF3-219ENST00000610756 RCE1Q9Y256 329 aa16.94■□□□□ 0.3
TCF3-219ENST00000610756 AP3M1Q9Y2T2 418 aa16.94■□□□□ 0.3
TCF3-219ENST00000610756 MED13LQ71F56 2210 aa16.93■□□□□ 0.3
TCF3-219ENST00000610756 TRAPPC13A5PLN9 417 aa16.93■□□□□ 0.3
TCF3-219ENST00000610756 CPSF4LA6NMK7 179 aaKnown RBP16.93■□□□□ 0.3
TCF3-219ENST00000610756 KRT33AO76009 404 aa16.93■□□□□ 0.3
TCF3-219ENST00000610756 LYPD3O95274 346 aa16.93■□□□□ 0.3
TCF3-219ENST00000610756 THY1P04216 161 aa16.93■□□□□ 0.3
TCF3-219ENST00000610756 COX4I1P13073 169 aa16.93■□□□□ 0.3
TCF3-219ENST00000610756 FOSL1P15407 271 aa16.93■□□□□ 0.3
TCF3-219ENST00000610756 PTAFRP25105 342 aa16.93■□□□□ 0.3
TCF3-219ENST00000610756 CLDN17P56750 224 aa16.93■□□□□ 0.3
TCF3-219ENST00000610756 FOXD4Q12950 439 aaPredicted RBP16.93■□□□□ 0.3
TCF3-219ENST00000610756 C1DQ13901 141 aaKnown RBP16.93■□□□□ 0.3
TCF3-219ENST00000610756 KLHL17Q6TDP4 642 aa16.93■□□□□ 0.3
TCF3-219ENST00000610756 KRTAP1-3Q8IUG1 177 aa16.93■□□□□ 0.3
TCF3-219ENST00000610756 POU5F2Q8N7G0 328 aa16.93■□□□□ 0.3
TCF3-219ENST00000610756 WFDC11Q8NEX6 87 aa16.93■□□□□ 0.3
TCF3-219ENST00000610756 ANKK1Q8NFD2 765 aa16.93■□□□□ 0.3
TCF3-219ENST00000610756 VANGL1Q8TAA9 524 aaPredicted RBP16.93■□□□□ 0.3
TCF3-219ENST00000610756 TMEM171Q8WVE6 324 aa16.93■□□□□ 0.3
TCF3-219ENST00000610756 PROX1Q92786 737 aa16.93■□□□□ 0.3
TCF3-219ENST00000610756 FBXW5Q969U6 566 aa16.93■□□□□ 0.3
TCF3-219ENST00000610756 RCN3Q96D15 328 aa16.93■□□□□ 0.3
TCF3-219ENST00000610756 MPP4Q96JB8 637 aa16.93■□□□□ 0.3
TCF3-219ENST00000610756 ASPNQ9BXN1 380 aa16.93■□□□□ 0.3
TCF3-219ENST00000610756 GSX2Q9BZM3 304 aa16.93■□□□□ 0.3
TCF3-219ENST00000610756 MRPL39Q9NYK5 338 aaKnown RBP16.93■□□□□ 0.3
TCF3-219ENST00000610756 USP22Q9UPT9 525 aa16.93■□□□□ 0.3
TCF3-219ENST00000610756 MGAT4BQ9UQ53 548 aa16.93■□□□□ 0.3
TCF3-219ENST00000610756 AMDHD2Q9Y303 409 aa16.93■□□□□ 0.3
TCF3-219ENST00000610756 SH3GLB1Q9Y371 365 aa16.93■□□□□ 0.3
TCF3-219ENST00000610756 FAM220BPB1ANY3 271 aa16.92■□□□□ 0.3
TCF3-219ENST00000610756 ZNF587BE7ETH6 402 aa16.92■□□□□ 0.3
TCF3-219ENST00000610756 RPL36A-HNRNPH2H7BZ11 118 aa16.92■□□□□ 0.3
TCF3-219ENST00000610756 MT-ATP6P00846 226 aa16.92■□□□□ 0.3
TCF3-219ENST00000610756 DANCRP0C864 163 aa16.92■□□□□ 0.3
TCF3-219ENST00000610756 CBLP22681 906 aa16.92■□□□□ 0.3
TCF3-219ENST00000610756 KDELR2P33947 212 aa16.92■□□□□ 0.3
TCF3-219ENST00000610756 NHLRC1Q6VVB1 395 aa16.92■□□□□ 0.3
TCF3-219ENST00000610756 SPATA21Q7Z572 469 aa16.92■□□□□ 0.3
TCF3-219ENST00000610756 OR2T12Q8NG77 320 aa16.92■□□□□ 0.3
TCF3-219ENST00000610756 SMAP2Q8WU79 429 aaPredicted RBP16.92■□□□□ 0.3
TCF3-219ENST00000610756 MOGAT1Q96PD6 335 aa16.92■□□□□ 0.3
TCF3-219ENST00000610756 HOPXQ9BPY8 73 aaPredicted RBP16.92■□□□□ 0.3
TCF3-219ENST00000610756 ELAC2Q9BQ52 826 aaKnown RBP16.92■□□□□ 0.3
TCF3-219ENST00000610756 EFCAB1Q9HAE3 211 aa16.92■□□□□ 0.3
TCF3-219ENST00000610756 ZNF701Q9NV72 531 aaPredicted RBP16.92■□□□□ 0.3
TCF3-219ENST00000610756 MTORP42345 2549 aa16.91■□□□□ 0.3
TCF3-219ENST00000610756 A0A1W2PR80 420 aa16.91■□□□□ 0.3
TCF3-219ENST00000610756 ELOVL7A1L3X0 281 aa16.91■□□□□ 0.3
TCF3-219ENST00000610756 SHISA9B4DS77 424 aa16.91■□□□□ 0.3
TCF3-219ENST00000610756 ABCD4O14678 606 aa16.91■□□□□ 0.3
TCF3-219ENST00000610756 UPK3AO75631 287 aa16.91■□□□□ 0.3
TCF3-219ENST00000610756 PAX7P23759 505 aa16.91■□□□□ 0.3
TCF3-219ENST00000610756 CD40P25942 277 aa16.91■□□□□ 0.3
TCF3-219ENST00000610756 SEC24CP53992 1094 aa16.91■□□□□ 0.3
TCF3-219ENST00000610756 PRPS1P60891 318 aa16.91■□□□□ 0.3
TCF3-219ENST00000610756 TTC33Q6PID6 262 aaPredicted RBP16.91■□□□□ 0.3
TCF3-219ENST00000610756 WDR88Q6ZMY6 472 aa16.91■□□□□ 0.3
TCF3-219ENST00000610756 LINGO2Q7L985 606 aa16.91■□□□□ 0.3
TCF3-219ENST00000610756 ARPINQ7Z6K5 226 aa16.91■□□□□ 0.3
TCF3-219ENST00000610756 TSPYL5Q86VY4 417 aaPredicted RBP16.91■□□□□ 0.3
TCF3-219ENST00000610756 SLC15A3Q8IY34 581 aa16.91■□□□□ 0.3
TCF3-219ENST00000610756 NEUROG1Q92886 237 aa16.91■□□□□ 0.3
TCF3-219ENST00000610756 ZNF426Q9BUY5 554 aa16.91■□□□□ 0.3
TCF3-219ENST00000610756 SLC19A3Q9BZV2 496 aa16.91■□□□□ 0.3
TCF3-219ENST00000610756 CXorf56Q9H5V9 222 aa16.91■□□□□ 0.3
TCF3-219ENST00000610756 DLL4Q9NR61 685 aa16.91■□□□□ 0.3
TCF3-219ENST00000610756 CMTM6Q9NX76 183 aa16.91■□□□□ 0.3
TCF3-219ENST00000610756 CISD1Q9NZ45 108 aaKnown RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms