RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 FBXO34Q9NWN3 711 aa20.48■□□□□ 0.87
SHANK2-220ENST00000608988 C2orf42Q9NWW7 574 aa20.48■□□□□ 0.87
SHANK2-220ENST00000608988 NPIPA5A0A0B4J1W7 369 aa20.47■□□□□ 0.87
SHANK2-220ENST00000608988 TRBV5-5A0A0J9YX44 114 aa20.47■□□□□ 0.87
SHANK2-220ENST00000608988 NPIPA7E9PJI5 369 aa20.47■□□□□ 0.87
SHANK2-220ENST00000608988 NKX2-2O95096 273 aa20.47■□□□□ 0.87
SHANK2-220ENST00000608988 CEACAM5P06731 702 aa20.47■□□□□ 0.87
SHANK2-220ENST00000608988 UBBP0CG47 229 aa20.47■□□□□ 0.87
SHANK2-220ENST00000608988 UBCP0CG48 685 aaKnown RBP20.47■□□□□ 0.87
SHANK2-220ENST00000608988 NPIPA8P0DM63 369 aa20.47■□□□□ 0.87
SHANK2-220ENST00000608988 RPS27AP62979 156 aaKnown RBP20.47■□□□□ 0.87
SHANK2-220ENST00000608988 UBA52P62987 128 aaKnown RBP20.47■□□□□ 0.87
SHANK2-220ENST00000608988 AGBL4Q5VU57 503 aa20.47■□□□□ 0.87
SHANK2-220ENST00000608988 NHLRC1Q6VVB1 395 aa20.47■□□□□ 0.87
SHANK2-220ENST00000608988 CFAP77Q6ZQR2 320 aa20.47■□□□□ 0.87
SHANK2-220ENST00000608988 FAM220AQ7Z4H9 259 aa20.47■□□□□ 0.87
SHANK2-220ENST00000608988 OR4N5Q8IXE1 308 aa20.47■□□□□ 0.87
SHANK2-220ENST00000608988 ZNF454Q8N9F8 522 aa20.47■□□□□ 0.87
SHANK2-220ENST00000608988 C1QTNF6Q9BXI9 259 aa20.47■□□□□ 0.87
SHANK2-220ENST00000608988 ALX4Q9H161 411 aaPredicted RBP20.47■□□□□ 0.87
SHANK2-220ENST00000608988 CEP350Q5VT06 3117 aa20.47■□□□□ 0.87
SHANK2-220ENST00000608988 ZFPL1O95159 310 aa20.47■□□□□ 0.87
SHANK2-220ENST00000608988 HPP00738 406 aa20.47■□□□□ 0.87
SHANK2-220ENST00000608988 NGFRP08138 427 aa20.47■□□□□ 0.87
SHANK2-220ENST00000608988 LINC00271P0C7V0 271 aa20.47■□□□□ 0.87
SHANK2-220ENST00000608988 PRMT2P55345 433 aa20.47■□□□□ 0.87
SHANK2-220ENST00000608988 ZNF660Q6AZW8 331 aaPredicted RBP20.47■□□□□ 0.87
SHANK2-220ENST00000608988 FIGNL1Q6PIW4 674 aa20.47■□□□□ 0.87
SHANK2-220ENST00000608988 ABHD13Q7L211 337 aa20.47■□□□□ 0.87
SHANK2-220ENST00000608988 ZNF227Q86WZ6 799 aa20.47■□□□□ 0.87
SHANK2-220ENST00000608988 MCATQ8IVS2 390 aaKnown RBP20.47■□□□□ 0.87
SHANK2-220ENST00000608988 GPX7Q96SL4 187 aaPredicted RBP20.47■□□□□ 0.87
SHANK2-220ENST00000608988 ST6GALNAC1Q9NSC7 600 aaPredicted RBP20.47■□□□□ 0.87
SHANK2-220ENST00000608988 DNAJB12Q9NXW2 375 aaKnown RBP20.47■□□□□ 0.87
SHANK2-220ENST00000608988 COL4A2P08572 1712 aa20.47■□□□□ 0.87
SHANK2-220ENST00000608988 FXYD6-FXYD2A0A087WZ82 144 aa20.46■□□□□ 0.87
SHANK2-220ENST00000608988 HIDE1A8MVS5 230 aa20.46■□□□□ 0.87
SHANK2-220ENST00000608988 SELENOFO60613 162 aa20.46■□□□□ 0.87
SHANK2-220ENST00000608988 MELTFP08582 738 aa20.46■□□□□ 0.87
SHANK2-220ENST00000608988 POU2F2P09086 479 aa20.46■□□□□ 0.87
SHANK2-220ENST00000608988 AK4P27144 223 aaPredicted RBP20.46■□□□□ 0.87
SHANK2-220ENST00000608988 GABRA3P34903 492 aa20.46■□□□□ 0.87
SHANK2-220ENST00000608988 SLC25A1P53007 311 aa20.46■□□□□ 0.87
SHANK2-220ENST00000608988 LRRTM1Q86UE6 522 aa20.46■□□□□ 0.87
SHANK2-220ENST00000608988 STPG2Q8N412 459 aa20.46■□□□□ 0.87
SHANK2-220ENST00000608988 LCN9Q8WX39 176 aa20.46■□□□□ 0.87
SHANK2-220ENST00000608988 ING5Q8WYH8 240 aa20.46■□□□□ 0.87
SHANK2-220ENST00000608988 EDAQ92838 391 aa20.46■□□□□ 0.87
SHANK2-220ENST00000608988 FXYD6Q9H0Q3 95 aa20.46■□□□□ 0.87
SHANK2-220ENST00000608988 THAP10Q9P2Z0 257 aaPredicted RBP20.46■□□□□ 0.87
SHANK2-220ENST00000608988 HRH3Q9Y5N1 445 aa20.46■□□□□ 0.87
SHANK2-220ENST00000608988 MPTX1A8MV57 137 aa20.45■□□□□ 0.86
SHANK2-220ENST00000608988 MCIDASD6RGH6 385 aa20.45■□□□□ 0.86
SHANK2-220ENST00000608988 TNFSF14O43557 240 aa20.45■□□□□ 0.86
SHANK2-220ENST00000608988 GPR75O95800 540 aa20.45■□□□□ 0.86
SHANK2-220ENST00000608988 ZNF35P13682 527 aa20.45■□□□□ 0.86
SHANK2-220ENST00000608988 EPCAMP16422 314 aa20.45■□□□□ 0.86
SHANK2-220ENST00000608988 RAB3AP20336 220 aa20.45■□□□□ 0.86
SHANK2-220ENST00000608988 H2BFSP57053 126 aa20.45■□□□□ 0.86
SHANK2-220ENST00000608988 NOGQ13253 232 aa20.45■□□□□ 0.86
SHANK2-220ENST00000608988 CSRP2Q16527 193 aa20.45■□□□□ 0.86
SHANK2-220ENST00000608988 PRICKLE4Q2TBC4 344 aa20.45■□□□□ 0.86
SHANK2-220ENST00000608988 TSSK4Q6SA08 328 aa20.45■□□□□ 0.86
SHANK2-220ENST00000608988 SLC16A9Q7RTY1 509 aa20.45■□□□□ 0.86
SHANK2-220ENST00000608988 GRASPQ7Z6J2 395 aaPredicted RBP20.45■□□□□ 0.86
SHANK2-220ENST00000608988 FBXW5Q969U6 566 aa20.45■□□□□ 0.86
SHANK2-220ENST00000608988 IL21RQ9HBE5 538 aa20.45■□□□□ 0.86
SHANK2-220ENST00000608988 RXFP3Q9NSD7 469 aa20.45■□□□□ 0.86
SHANK2-220ENST00000608988 MOKQ9UQ07 419 aa20.45■□□□□ 0.86
SHANK2-220ENST00000608988 ZNF337Q9Y3M9 751 aa20.45■□□□□ 0.86
SHANK2-220ENST00000608988 LRRC72A6NJI9 287 aa20.45■□□□□ 0.86
SHANK2-220ENST00000608988 HSPB2A8KAH6 182 aa20.45■□□□□ 0.86
SHANK2-220ENST00000608988 LATO43561 262 aa20.45■□□□□ 0.86
SHANK2-220ENST00000608988 LDB3O75112 727 aa20.45■□□□□ 0.86
SHANK2-220ENST00000608988 ICAM2P13598 275 aa20.45■□□□□ 0.86
SHANK2-220ENST00000608988 AGTR1P30556 359 aa20.45■□□□□ 0.86
SHANK2-220ENST00000608988 NANOS3P60323 173 aaKnown RBP20.45■□□□□ 0.86
SHANK2-220ENST00000608988 ALKBH1Q13686 389 aaKnown RBP20.45■□□□□ 0.86
SHANK2-220ENST00000608988 HSPB2Q16082 182 aa20.45■□□□□ 0.86
SHANK2-220ENST00000608988 PCGF3Q3KNV8 242 aa20.45■□□□□ 0.86
SHANK2-220ENST00000608988 DEFB134Q4QY38 66 aa20.45■□□□□ 0.86
SHANK2-220ENST00000608988 ZNF595Q8IYB9 648 aa20.45■□□□□ 0.86
SHANK2-220ENST00000608988 CAMKVQ8NCB2 501 aa20.45■□□□□ 0.86
SHANK2-220ENST00000608988 OR5M1Q8NGP8 315 aa20.45■□□□□ 0.86
SHANK2-220ENST00000608988 OR5AK2Q8NH90 309 aa20.45■□□□□ 0.86
SHANK2-220ENST00000608988 ZNF417Q8TAU3 575 aa20.45■□□□□ 0.86
SHANK2-220ENST00000608988 CCDC107Q8WV48 283 aa20.45■□□□□ 0.86
SHANK2-220ENST00000608988 RNF166Q96A37 237 aaPredicted RBP20.45■□□□□ 0.86
SHANK2-220ENST00000608988 OR1F2PQ96R84 312 aa20.45■□□□□ 0.86
SHANK2-220ENST00000608988 CCNL2Q96S94 520 aaPredicted RBP20.45■□□□□ 0.86
SHANK2-220ENST00000608988 MNTQ99583 582 aa20.45■□□□□ 0.86
SHANK2-220ENST00000608988 EXOSC3Q9NQT5 275 aaKnown RBP20.45■□□□□ 0.86
SHANK2-220ENST00000608988 MRPS23Q9Y3D9 190 aaKnown RBP20.45■□□□□ 0.86
SHANK2-220ENST00000608988 RFPL4AA6NLU0 287 aa20.44■□□□□ 0.86
SHANK2-220ENST00000608988 RFPL4AL1F8VTS6 287 aa20.44■□□□□ 0.86
SHANK2-220ENST00000608988 ABCD4O14678 606 aa20.44■□□□□ 0.86
SHANK2-220ENST00000608988 PRAMEF2O60811 474 aa20.44■□□□□ 0.86
SHANK2-220ENST00000608988 AKAIN1P0CW23 69 aa20.44■□□□□ 0.86
SHANK2-220ENST00000608988 MGMTP16455 207 aa20.44■□□□□ 0.86
SHANK2-220ENST00000608988 ITPKBP27987 946 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms