RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 NUDT7P0C024 238 aa11.63□□□□□ -0.55
POLR2J3-219ENST00000608621 OR4A8P0C604 315 aa11.63□□□□□ -0.55
POLR2J3-219ENST00000608621 CECR9P0C854 216 aa11.63□□□□□ -0.55
POLR2J3-219ENST00000608621 PNMTP11086 282 aa11.63□□□□□ -0.55
POLR2J3-219ENST00000608621 APEHP13798 732 aaKnown RBP11.63□□□□□ -0.55
POLR2J3-219ENST00000608621 HOXB1P14653 301 aaPredicted RBP11.63□□□□□ -0.55
POLR2J3-219ENST00000608621 ZNF43P17038 809 aa11.63□□□□□ -0.55
POLR2J3-219ENST00000608621 IGFBP5P24593 272 aa11.63□□□□□ -0.55
POLR2J3-219ENST00000608621 CALCRP30988 508 aa11.63□□□□□ -0.55
POLR2J3-219ENST00000608621 RPS5P46782 204 aaKnown RBP11.63□□□□□ -0.55
POLR2J3-219ENST00000608621 ARF1P84077 181 aaKnown RBP11.63□□□□□ -0.55
POLR2J3-219ENST00000608621 ROR2Q01974 943 aaKnown RBP11.63□□□□□ -0.55
POLR2J3-219ENST00000608621 EGR4Q05215 589 aa11.63□□□□□ -0.55
POLR2J3-219ENST00000608621 ADIPOQQ15848 244 aa11.63□□□□□ -0.55
POLR2J3-219ENST00000608621 IQCCQ4KMZ1 466 aa11.63□□□□□ -0.55
POLR2J3-219ENST00000608621 ZNF311Q5JNZ3 666 aa11.63□□□□□ -0.55
POLR2J3-219ENST00000608621 FAM166AQ6J272 317 aa11.63□□□□□ -0.55
POLR2J3-219ENST00000608621 IL17RELQ6ZVW7 336 aa11.63□□□□□ -0.55
POLR2J3-219ENST00000608621 MGARPQ8TDB4 240 aa11.63□□□□□ -0.55
POLR2J3-219ENST00000608621 VPS33AQ96AX1 596 aa11.63□□□□□ -0.55
POLR2J3-219ENST00000608621 MSI2Q96DH6 328 aaKnown RBP11.63□□□□□ -0.55
POLR2J3-219ENST00000608621 ITCHQ96J02 903 aa11.63□□□□□ -0.55
POLR2J3-219ENST00000608621 MAELQ96JY0 434 aaKnown RBP11.63□□□□□ -0.55
POLR2J3-219ENST00000608621 NELFAQ9H3P2 528 aa11.63□□□□□ -0.55
POLR2J3-219ENST00000608621 RMND5AQ9H871 391 aa11.63□□□□□ -0.55
POLR2J3-219ENST00000608621 CHODLQ9H9P2 273 aa11.63□□□□□ -0.55
POLR2J3-219ENST00000608621 SEC61A2Q9H9S3 476 aa11.63□□□□□ -0.55
POLR2J3-219ENST00000608621 CACYBPQ9HB71 228 aaKnown RBP11.63□□□□□ -0.55
POLR2J3-219ENST00000608621 THUMPD1Q9NXG2 353 aaKnown RBP11.63□□□□□ -0.55
POLR2J3-219ENST00000608621 ZIM2Q9NZV7 527 aa11.63□□□□□ -0.55
POLR2J3-219ENST00000608621 KCNS2Q9ULS6 477 aa11.63□□□□□ -0.55
POLR2J3-219ENST00000608621 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.63□□□□□ -0.557e-8■■■□□ 16.4
POLR2J3-219ENST00000608621 IGHV4-61A0A0C4DH41 118 aa11.62□□□□□ -0.55
POLR2J3-219ENST00000608621 TMEM120BA0PK00 339 aa11.62□□□□□ -0.55
POLR2J3-219ENST00000608621 RPL36A-HNRNPH2H7BZ11 118 aa11.62□□□□□ -0.55
POLR2J3-219ENST00000608621 PDE5AO76074 875 aa11.62□□□□□ -0.55
POLR2J3-219ENST00000608621 IGLV1-44P01699 117 aa11.62□□□□□ -0.55
POLR2J3-219ENST00000608621 CBR1P16152 277 aa11.62□□□□□ -0.55
POLR2J3-219ENST00000608621 POLR2JP52435 117 aaKnown RBP11.62□□□□□ -0.55
POLR2J3-219ENST00000608621 HGFACQ04756 655 aa11.62□□□□□ -0.55
POLR2J3-219ENST00000608621 RGNQ15493 299 aa11.62□□□□□ -0.55
POLR2J3-219ENST00000608621 EFNB3Q15768 340 aa11.62□□□□□ -0.55
POLR2J3-219ENST00000608621 KRTAP24-1Q3LI83 254 aa11.62□□□□□ -0.55
POLR2J3-219ENST00000608621 C3orf36Q3SXR2 165 aa11.62□□□□□ -0.55
POLR2J3-219ENST00000608621 C6orf10Q5SRN2 563 aa11.62□□□□□ -0.55
POLR2J3-219ENST00000608621 FAM120AOSQ5T036 256 aa11.62□□□□□ -0.55
POLR2J3-219ENST00000608621 MSANTD1Q6ZTZ1 278 aa11.62□□□□□ -0.55
POLR2J3-219ENST00000608621 CROCCP2Q86T23 111 aa11.62□□□□□ -0.55
POLR2J3-219ENST00000608621 OR4F15Q8NGB8 312 aa11.62□□□□□ -0.55
POLR2J3-219ENST00000608621 OR9I1Q8NGQ6 314 aa11.62□□□□□ -0.55
POLR2J3-219ENST00000608621 KTI12Q96EK9 354 aaPredicted RBP11.62□□□□□ -0.55
POLR2J3-219ENST00000608621 OXGR1Q96P68 337 aa11.62□□□□□ -0.55
POLR2J3-219ENST00000608621 ZNF317Q96PQ6 595 aaPredicted RBP11.62□□□□□ -0.55
POLR2J3-219ENST00000608621 OR52B2Q96RD2 323 aa11.62□□□□□ -0.55
POLR2J3-219ENST00000608621 PTDSS2Q9BVG9 487 aa11.62□□□□□ -0.55
POLR2J3-219ENST00000608621 PLK3Q9H4B4 646 aa11.62□□□□□ -0.55
POLR2J3-219ENST00000608621 MYOZ1Q9NP98 299 aaPredicted RBP11.62□□□□□ -0.55
POLR2J3-219ENST00000608621 SDR39U1Q9NRG7 319 aaPredicted RBP11.62□□□□□ -0.55
POLR2J3-219ENST00000608621 RPS6KB2Q9UBS0 482 aa11.62□□□□□ -0.55
POLR2J3-219ENST00000608621 SEC14L4Q9UDX3 406 aa11.62□□□□□ -0.55
POLR2J3-219ENST00000608621 PCDHB14Q9Y5E9 798 aa11.62□□□□□ -0.55
POLR2J3-219ENST00000608621 CLIC1O00299 241 aa11.61□□□□□ -0.55
POLR2J3-219ENST00000608621 UBDO15205 165 aa11.61□□□□□ -0.55
POLR2J3-219ENST00000608621 SLC43A1O75387 559 aa11.61□□□□□ -0.55
POLR2J3-219ENST00000608621 ZNF432O94892 652 aa11.61□□□□□ -0.55
POLR2J3-219ENST00000608621 TGFAP01135 160 aa11.61□□□□□ -0.55
POLR2J3-219ENST00000608621 IGKV3-15P01624 115 aa11.61□□□□□ -0.55
POLR2J3-219ENST00000608621 CELA3BP08861 270 aa11.61□□□□□ -0.55
POLR2J3-219ENST00000608621 SRD5A1P18405 259 aa11.61□□□□□ -0.55
POLR2J3-219ENST00000608621 GTF2E2P29084 291 aaKnown RBP11.61□□□□□ -0.55
POLR2J3-219ENST00000608621 THBS2P35442 1172 aa11.61□□□□□ -0.55
POLR2J3-219ENST00000608621 THBS4P35443 961 aa11.61□□□□□ -0.55
POLR2J3-219ENST00000608621 IDH3GP51553 393 aaPredicted RBP11.61□□□□□ -0.55
POLR2J3-219ENST00000608621 SH3BGRP55822 239 aaPredicted RBP11.61□□□□□ -0.55
POLR2J3-219ENST00000608621 SRSF2Q01130 221 aaKnown RBP11.61□□□□□ -0.55
POLR2J3-219ENST00000608621 C1DQ13901 141 aaKnown RBP11.61□□□□□ -0.55
POLR2J3-219ENST00000608621 MAVSQ7Z434 540 aa11.61□□□□□ -0.55
POLR2J3-219ENST00000608621 MYPOPQ86VE0 399 aaPredicted RBP11.61□□□□□ -0.55
POLR2J3-219ENST00000608621 GPR137CQ8N3F9 429 aa11.61□□□□□ -0.55
POLR2J3-219ENST00000608621 FAM169BQ8N8A8 192 aa11.61□□□□□ -0.55
POLR2J3-219ENST00000608621 ZNF540Q8NDQ6 660 aa11.61□□□□□ -0.55
POLR2J3-219ENST00000608621 GTF2H4Q92759 462 aa11.61□□□□□ -0.55
POLR2J3-219ENST00000608621 MAL2Q969L2 176 aa11.61□□□□□ -0.55
POLR2J3-219ENST00000608621 TAAR8Q969N4 342 aa11.61□□□□□ -0.55
POLR2J3-219ENST00000608621 ZNF837Q96EG3 531 aaPredicted RBP11.61□□□□□ -0.55
POLR2J3-219ENST00000608621 RSPO3Q9BXY4 272 aaPredicted RBP11.61□□□□□ -0.55
POLR2J3-219ENST00000608621 PAIP1Q9H074 479 aaKnown RBP11.61□□□□□ -0.55
POLR2J3-219ENST00000608621 RAB1BQ9H0U4 201 aa11.61□□□□□ -0.55
POLR2J3-219ENST00000608621 GPR35Q9HC97 309 aa11.61□□□□□ -0.55
POLR2J3-219ENST00000608621 BCL2L10Q9HD36 194 aa11.61□□□□□ -0.55
POLR2J3-219ENST00000608621 RCE1Q9Y256 329 aa11.61□□□□□ -0.55
POLR2J3-219ENST00000608621 TMEM129A0AVI4 362 aa11.6□□□□□ -0.55
POLR2J3-219ENST00000608621 VSTM5A8MXK1 200 aa11.6□□□□□ -0.55
POLR2J3-219ENST00000608621 OR2T1O43869 369 aa11.6□□□□□ -0.55
POLR2J3-219ENST00000608621 STAMBPO95630 424 aa11.6□□□□□ -0.55
POLR2J3-219ENST00000608621 ZNF23P17027 643 aa11.6□□□□□ -0.55
POLR2J3-219ENST00000608621 NPR2P20594 1047 aa11.6□□□□□ -0.55
POLR2J3-219ENST00000608621 CBLP22681 906 aa11.6□□□□□ -0.55
POLR2J3-219ENST00000608621 PPOXP50336 477 aa11.6□□□□□ -0.55
POLR2J3-219ENST00000608621 CEACAM16Q2WEN9 425 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms