RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 IL17BQ9UHF5 180 aa11.57□□□□□ -0.56
CTCFL-218ENST00000608440 SHPKQ9UHJ6 478 aa11.57□□□□□ -0.56
CTCFL-218ENST00000608440 SLC22A14Q9Y267 594 aa11.57□□□□□ -0.56
CTCFL-218ENST00000608440 J3QLW9 94 aa11.56□□□□□ -0.56
CTCFL-218ENST00000608440 IGHA1P01876 353 aa11.56□□□□□ -0.56
CTCFL-218ENST00000608440 ASGR2P07307 311 aa11.56□□□□□ -0.56
CTCFL-218ENST00000608440 ITGA5P08648 1049 aa11.56□□□□□ -0.56
CTCFL-218ENST00000608440 QDPRP09417 244 aa11.56□□□□□ -0.56
CTCFL-218ENST00000608440 ZNF19P17023 458 aa11.56□□□□□ -0.56
CTCFL-218ENST00000608440 TMEM11P17152 192 aa11.56□□□□□ -0.56
CTCFL-218ENST00000608440 LPOP22079 712 aaPredicted RBP11.56□□□□□ -0.56
CTCFL-218ENST00000608440 PMELP40967 661 aa11.56□□□□□ -0.56
CTCFL-218ENST00000608440 RPIAP49247 311 aa11.56□□□□□ -0.56
CTCFL-218ENST00000608440 PCGF3Q3KNV8 242 aa11.56□□□□□ -0.56
CTCFL-218ENST00000608440 TMPRSS11FQ6ZWK6 438 aa11.56□□□□□ -0.56
CTCFL-218ENST00000608440 GAREM2Q75VX8 874 aa11.56□□□□□ -0.56
CTCFL-218ENST00000608440 SEMA6DQ8NFY4 1073 aa11.56□□□□□ -0.56
CTCFL-218ENST00000608440 PPP1R1CQ8WVI7 109 aa11.56□□□□□ -0.56
CTCFL-218ENST00000608440 RAB8BQ92930 207 aa11.56□□□□□ -0.56
CTCFL-218ENST00000608440 SLC25A36Q96CQ1 311 aa11.56□□□□□ -0.56
CTCFL-218ENST00000608440 TAAR9Q96RI9 348 aa11.56□□□□□ -0.56
CTCFL-218ENST00000608440 MICU1Q9BPX6 476 aa11.56□□□□□ -0.56
CTCFL-218ENST00000608440 MED20Q9H944 212 aa11.56□□□□□ -0.56
CTCFL-218ENST00000608440 PRSS21Q9Y6M0 314 aa11.56□□□□□ -0.56
CTCFL-218ENST00000608440 DAPL1A0PJW8 107 aa11.56□□□□□ -0.56
CTCFL-218ENST00000608440 A8MWP6 167 aa11.56□□□□□ -0.56
CTCFL-218ENST00000608440 PIRO00625 290 aa11.56□□□□□ -0.56
CTCFL-218ENST00000608440 ANXA5P08758 320 aa11.56□□□□□ -0.56
CTCFL-218ENST00000608440 MRPL3P09001 348 aaKnown RBP11.56□□□□□ -0.56
CTCFL-218ENST00000608440 ARAFP10398 606 aa11.56□□□□□ -0.56
CTCFL-218ENST00000608440 MECP2P51608 486 aaKnown RBP11.56□□□□□ -0.56
CTCFL-218ENST00000608440 TUSC3Q13454 348 aa11.56□□□□□ -0.56
CTCFL-218ENST00000608440 ZNF345Q14585 488 aa11.56□□□□□ -0.56
CTCFL-218ENST00000608440 KHDC3LQ587J8 217 aa11.56□□□□□ -0.56
CTCFL-218ENST00000608440 IL34Q6ZMJ4 242 aa11.56□□□□□ -0.56
CTCFL-218ENST00000608440 ACBD7Q8N6N7 88 aa11.56□□□□□ -0.56
CTCFL-218ENST00000608440 ZNF433Q8N7K0 673 aaPredicted RBP11.56□□□□□ -0.56
CTCFL-218ENST00000608440 INO80EQ8NBZ0 244 aaPredicted RBP11.56□□□□□ -0.56
CTCFL-218ENST00000608440 OR4C16Q8NGL9 310 aa11.56□□□□□ -0.56
CTCFL-218ENST00000608440 APOBEC4Q8WW27 367 aaKnown RBP11.56□□□□□ -0.56
CTCFL-218ENST00000608440 TMEM208Q9BTX3 173 aa11.56□□□□□ -0.56
CTCFL-218ENST00000608440 ZNF350Q9GZX5 532 aa11.56□□□□□ -0.56
CTCFL-218ENST00000608440 FBXO44Q9H4M3 255 aa11.56□□□□□ -0.56
CTCFL-218ENST00000608440 FBXO4Q9UKT5 387 aa11.56□□□□□ -0.56
CTCFL-218ENST00000608440 PADI3Q9ULW8 664 aa11.56□□□□□ -0.56
CTCFL-218ENST00000608440 A0A1W2PRQ8 180 aa11.55□□□□□ -0.56
CTCFL-218ENST00000608440 BLOC1S5-TXNDC5H3BN57 136 aa11.55□□□□□ -0.56
CTCFL-218ENST00000608440 PSMD9O00233 223 aa11.55□□□□□ -0.56
CTCFL-218ENST00000608440 RTCAO00442 366 aaKnown RBP11.55□□□□□ -0.56
CTCFL-218ENST00000608440 ETHE1O95571 254 aa11.55□□□□□ -0.56
CTCFL-218ENST00000608440 CD74P04233 296 aa11.55□□□□□ -0.56
CTCFL-218ENST00000608440 CAV2P51636 162 aa11.55□□□□□ -0.56
CTCFL-218ENST00000608440 SLC16A1P53985 500 aa11.55□□□□□ -0.56
CTCFL-218ENST00000608440 CHIT1Q13231 466 aa11.55□□□□□ -0.56
CTCFL-218ENST00000608440 STPG1Q5TH74 334 aa11.55□□□□□ -0.56
CTCFL-218ENST00000608440 REEP3Q6NUK4 255 aa11.55□□□□□ -0.56
CTCFL-218ENST00000608440 ZNF574Q6ZN55 896 aaPredicted RBP11.55□□□□□ -0.56
CTCFL-218ENST00000608440 OLIG3Q7RTU3 272 aa11.55□□□□□ -0.56
CTCFL-218ENST00000608440 CPOQ8IVL8 374 aa11.55□□□□□ -0.56
CTCFL-218ENST00000608440 BPIFB2Q8N4F0 458 aa11.55□□□□□ -0.56
CTCFL-218ENST00000608440 OR8S1Q8NH09 359 aa11.55□□□□□ -0.56
CTCFL-218ENST00000608440 PHYHIPQ92561 330 aa11.55□□□□□ -0.56
CTCFL-218ENST00000608440 GHSRQ92847 366 aa11.55□□□□□ -0.56
CTCFL-218ENST00000608440 TIMP4Q99727 224 aa11.55□□□□□ -0.56
CTCFL-218ENST00000608440 ATG10Q9H0Y0 220 aa11.55□□□□□ -0.56
CTCFL-218ENST00000608440 MIEF1Q9NQG6 463 aa11.55□□□□□ -0.56
CTCFL-218ENST00000608440 C19orf12Q9NSK7 152 aa11.55□□□□□ -0.56
CTCFL-218ENST00000608440 CHRNA9Q9UGM1 479 aa11.55□□□□□ -0.56
CTCFL-218ENST00000608440 RALGAPA2Q2PPJ7 1873 aa11.55□□□□□ -0.56
CTCFL-218ENST00000608440 RDH16O75452 317 aa11.55□□□□□ -0.56
CTCFL-218ENST00000608440 SOD3P08294 240 aa11.55□□□□□ -0.56
CTCFL-218ENST00000608440 DGKAP23743 735 aa11.55□□□□□ -0.56
CTCFL-218ENST00000608440 PRPH2P23942 346 aa11.55□□□□□ -0.56
CTCFL-218ENST00000608440 ID4P47928 161 aa11.55□□□□□ -0.56
CTCFL-218ENST00000608440 LILRA4P59901 499 aa11.55□□□□□ -0.56
CTCFL-218ENST00000608440 RAC1P63000 192 aa11.55□□□□□ -0.56
CTCFL-218ENST00000608440 TRA2AQ13595 282 aaKnown RBP eCLIP11.55□□□□□ -0.56
CTCFL-218ENST00000608440 LIN54Q6MZP7 749 aa11.55□□□□□ -0.56
CTCFL-218ENST00000608440 FAM199XQ6PEV8 388 aaPredicted RBP11.55□□□□□ -0.56
CTCFL-218ENST00000608440 TEX26Q8N6G2 289 aa11.55□□□□□ -0.56
CTCFL-218ENST00000608440 C19orf47Q8N9M1 422 aaKnown RBP11.55□□□□□ -0.56
CTCFL-218ENST00000608440 ROBO4Q8WZ75 1007 aa11.55□□□□□ -0.56
CTCFL-218ENST00000608440 MVB12AQ96EY5 273 aa11.55□□□□□ -0.56
CTCFL-218ENST00000608440 UBQLN3Q9H347 655 aa11.55□□□□□ -0.56
CTCFL-218ENST00000608440 POFUT1Q9H488 388 aa11.55□□□□□ -0.56
CTCFL-218ENST00000608440 A4GNTQ9UNA3 340 aa11.55□□□□□ -0.56
CTCFL-218ENST00000608440 RUVBL1Q9Y265 456 aaKnown RBP11.55□□□□□ -0.56
CTCFL-218ENST00000608440 A6NNC1 897 aa11.54□□□□□ -0.56
CTCFL-218ENST00000608440 PTGESO14684 152 aa11.54□□□□□ -0.56
CTCFL-218ENST00000608440 MAGEB4O15481 346 aaPredicted RBP11.54□□□□□ -0.56
CTCFL-218ENST00000608440 SFTPBP07988 381 aa11.54□□□□□ -0.56
CTCFL-218ENST00000608440 LIPCP11150 499 aa11.54□□□□□ -0.56
CTCFL-218ENST00000608440 PGAM2P15259 253 aa11.54□□□□□ -0.56
CTCFL-218ENST00000608440 TYRP1P17643 537 aa11.54□□□□□ -0.56
CTCFL-218ENST00000608440 RAB41Q5JT25 222 aa11.54□□□□□ -0.56
CTCFL-218ENST00000608440 DMRTA1Q5VZB9 504 aa11.54□□□□□ -0.56
CTCFL-218ENST00000608440 FBXO46Q6PJ61 603 aaPredicted RBP11.54□□□□□ -0.56
CTCFL-218ENST00000608440 LINGO4Q6UY18 593 aa11.54□□□□□ -0.56
CTCFL-218ENST00000608440 COMTD1Q86VU5 262 aa11.54□□□□□ -0.56
CTCFL-218ENST00000608440 RANBP3LQ86VV4 465 aaPredicted RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms