RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 C11orf98E9PRG8 122 aa12.73□□□□□ -0.37
HDDC2-204ENST00000608295 ABCD4O14678 606 aa12.73□□□□□ -0.37
HDDC2-204ENST00000608295 CHP2O43745 196 aa12.73□□□□□ -0.37
HDDC2-204ENST00000608295 CCDC22O60826 627 aa12.73□□□□□ -0.37
HDDC2-204ENST00000608295 UPK3AO75631 287 aa12.73□□□□□ -0.37
HDDC2-204ENST00000608295 HPRP00739 348 aa12.73□□□□□ -0.37
HDDC2-204ENST00000608295 BGLAPP02818 100 aa12.73□□□□□ -0.37
HDDC2-204ENST00000608295 ZNF43P17038 809 aa12.73□□□□□ -0.37
HDDC2-204ENST00000608295 DRD4P21917 467 aa12.73□□□□□ -0.37
HDDC2-204ENST00000608295 HOXC12P31275 282 aa12.73□□□□□ -0.37
HDDC2-204ENST00000608295 TAS2R41P59536 307 aa12.73□□□□□ -0.37
HDDC2-204ENST00000608295 POU3F1Q03052 451 aaPredicted RBP12.73□□□□□ -0.37
HDDC2-204ENST00000608295 LTBQ06643 244 aa12.73□□□□□ -0.37
HDDC2-204ENST00000608295 TIMM23BQ5SRD1 257 aa12.73□□□□□ -0.37
HDDC2-204ENST00000608295 NCMAPQ5T1S8 102 aa12.73□□□□□ -0.37
HDDC2-204ENST00000608295 FAM91A1Q658Y4 838 aa12.73□□□□□ -0.37
HDDC2-204ENST00000608295 SPNS3Q6ZMD2 512 aa12.73□□□□□ -0.37
HDDC2-204ENST00000608295 CPLX4Q7Z7G2 160 aa12.73□□□□□ -0.37
HDDC2-204ENST00000608295 RP9Q8TA86 221 aaKnown RBP12.73□□□□□ -0.37
HDDC2-204ENST00000608295 EMC6Q9BV81 110 aa12.73□□□□□ -0.37
HDDC2-204ENST00000608295 SF3B5Q9BWJ5 86 aaKnown RBP12.73□□□□□ -0.37
HDDC2-204ENST00000608295 ASPNQ9BXN1 380 aa12.73□□□□□ -0.37
HDDC2-204ENST00000608295 C12orf10Q9HB07 376 aa12.73□□□□□ -0.37
HDDC2-204ENST00000608295 NGBQ9NPG2 151 aa12.73□□□□□ -0.37
HDDC2-204ENST00000608295 MED29Q9NX70 200 aa12.73□□□□□ -0.37
HDDC2-204ENST00000608295 B3GAT1Q9P2W7 334 aa12.73□□□□□ -0.37
HDDC2-204ENST00000608295 LAMP3Q9UQV4 416 aa12.73□□□□□ -0.37
HDDC2-204ENST00000608295 A0A096LPE4 126 aa12.72□□□□□ -0.37
HDDC2-204ENST00000608295 A0A1W2PPZ6 126 aa12.72□□□□□ -0.37
HDDC2-204ENST00000608295 TRAPPC13A5PLN9 417 aa12.72□□□□□ -0.37
HDDC2-204ENST00000608295 ZNF587BE7ETH6 402 aa12.72□□□□□ -0.37
HDDC2-204ENST00000608295 NME4O00746 187 aa12.72□□□□□ -0.37
HDDC2-204ENST00000608295 HS3ST1O14792 307 aa12.72□□□□□ -0.37
HDDC2-204ENST00000608295 SMPD2O60906 423 aa12.72□□□□□ -0.37
HDDC2-204ENST00000608295 CNOT4O95628 575 aaKnown RBP12.72□□□□□ -0.37
HDDC2-204ENST00000608295 ZNF682O95780 498 aa12.72□□□□□ -0.37
HDDC2-204ENST00000608295 CH25HO95992 272 aa12.72□□□□□ -0.37
HDDC2-204ENST00000608295 UMPSP11172 480 aa12.72□□□□□ -0.37
HDDC2-204ENST00000608295 AHCYP23526 432 aa12.72□□□□□ -0.37
HDDC2-204ENST00000608295 YAP1P46937 504 aaKnown RBP12.72□□□□□ -0.37
HDDC2-204ENST00000608295 CDH11P55287 796 aa12.72□□□□□ -0.37
HDDC2-204ENST00000608295 LIPEQ05469 1076 aa12.72□□□□□ -0.37
HDDC2-204ENST00000608295 PMS2P3Q13401 168 aa12.72□□□□□ -0.37
HDDC2-204ENST00000608295 GABRA6Q16445 453 aa12.72□□□□□ -0.37
HDDC2-204ENST00000608295 CYBRD1Q53TN4 286 aa12.72□□□□□ -0.37
HDDC2-204ENST00000608295 Q5PR19 223 aa12.72□□□□□ -0.37
HDDC2-204ENST00000608295 ERICH5Q6P6B1 374 aa12.72□□□□□ -0.37
HDDC2-204ENST00000608295 KLHL24Q6TFL4 600 aa12.72□□□□□ -0.37
HDDC2-204ENST00000608295 CCDC80Q76M96 950 aa12.72□□□□□ -0.37
HDDC2-204ENST00000608295 UEVLDQ8IX04 471 aa12.72□□□□□ -0.37
HDDC2-204ENST00000608295 PFN4Q8NHR9 129 aa12.72□□□□□ -0.37
HDDC2-204ENST00000608295 SLC41A3Q96GZ6 507 aa12.72□□□□□ -0.37
HDDC2-204ENST00000608295 EPYCQ99645 322 aa12.72□□□□□ -0.37
HDDC2-204ENST00000608295 CXXC4Q9H2H0 198 aa12.72□□□□□ -0.37
HDDC2-204ENST00000608295 POU2F3Q9UKI9 436 aa12.72□□□□□ -0.37
HDDC2-204ENST00000608295 SLC25A15Q9Y619 301 aa12.72□□□□□ -0.37
HDDC2-204ENST00000608295 ITPR3Q14573 2671 aa12.72□□□□□ -0.37
HDDC2-204ENST00000608295 ARID1AO14497 2285 aa12.72□□□□□ -0.37
HDDC2-204ENST00000608295 ELOVL7A1L3X0 281 aa12.71□□□□□ -0.37
HDDC2-204ENST00000608295 GSTA4O15217 222 aa12.71□□□□□ -0.37
HDDC2-204ENST00000608295 SLC22A2O15244 555 aa12.71□□□□□ -0.37
HDDC2-204ENST00000608295 TRAF3IP2O43734 574 aaPredicted RBP12.71□□□□□ -0.37
HDDC2-204ENST00000608295 OR2T1O43869 369 aa12.71□□□□□ -0.37
HDDC2-204ENST00000608295 PIP5K1CO60331 668 aa12.71□□□□□ -0.37
HDDC2-204ENST00000608295 LYPD3O95274 346 aa12.71□□□□□ -0.37
HDDC2-204ENST00000608295 NCK1P16333 377 aa12.71□□□□□ -0.37
HDDC2-204ENST00000608295 MPGP29372 298 aa12.71□□□□□ -0.37
HDDC2-204ENST00000608295 ADAM8P78325 824 aa12.71□□□□□ -0.37
HDDC2-204ENST00000608295 NKX6-1P78426 367 aaPredicted RBP12.71□□□□□ -0.37
HDDC2-204ENST00000608295 ROR2Q01974 943 aaKnown RBP12.71□□□□□ -0.37
HDDC2-204ENST00000608295 MELKQ14680 651 aa12.71□□□□□ -0.37
HDDC2-204ENST00000608295 HMBOX1Q6NT76 420 aa12.71□□□□□ -0.37
HDDC2-204ENST00000608295 ZNF613Q6PF04 617 aa12.71□□□□□ -0.37
HDDC2-204ENST00000608295 TTC33Q6PID6 262 aaPredicted RBP12.71□□□□□ -0.37
HDDC2-204ENST00000608295 C20orf204Q6ZNR8 217 aa12.71□□□□□ -0.37
HDDC2-204ENST00000608295 H1FNTQ75WM6 255 aaPredicted RBP12.71□□□□□ -0.37
HDDC2-204ENST00000608295 VTCN1Q7Z7D3 282 aa12.71□□□□□ -0.37
HDDC2-204ENST00000608295 TGIF2LYQ8IUE0 185 aa12.71□□□□□ -0.37
HDDC2-204ENST00000608295 NKAIN4Q8IVV8 208 aa12.71□□□□□ -0.37
HDDC2-204ENST00000608295 WDFY1Q8IWB7 410 aa12.71□□□□□ -0.37
HDDC2-204ENST00000608295 SLC15A3Q8IY34 581 aa12.71□□□□□ -0.37
HDDC2-204ENST00000608295 LRRC17Q8N6Y2 441 aa12.71□□□□□ -0.37
HDDC2-204ENST00000608295 WDR31Q8NA23 367 aa12.71□□□□□ -0.37
HDDC2-204ENST00000608295 POMGNT2Q8NAT1 580 aa12.71□□□□□ -0.37
HDDC2-204ENST00000608295 LILRB1Q8NHL6 650 aaPredicted RBP12.71□□□□□ -0.37
HDDC2-204ENST00000608295 TMEM255BQ8WV15 326 aa12.71□□□□□ -0.37
HDDC2-204ENST00000608295 FBXW5Q969U6 566 aa12.71□□□□□ -0.37
HDDC2-204ENST00000608295 MBD6Q96DN6 1003 aa12.71□□□□□ -0.37
HDDC2-204ENST00000608295 TXNDC15Q96J42 360 aa12.71□□□□□ -0.37
HDDC2-204ENST00000608295 RADILQ96JH8 1075 aa12.71□□□□□ -0.37
HDDC2-204ENST00000608295 OXGR1Q96P68 337 aa12.71□□□□□ -0.37
HDDC2-204ENST00000608295 TMEM204Q9BSN7 226 aa12.71□□□□□ -0.37
HDDC2-204ENST00000608295 BEX4Q9NWD9 120 aaPredicted RBP12.71□□□□□ -0.37
HDDC2-204ENST00000608295 RHCGQ9UBD6 479 aa12.71□□□□□ -0.37
HDDC2-204ENST00000608295 USF3Q68DE3 2245 aa12.71□□□□□ -0.37
HDDC2-204ENST00000608295 HEATR1Q9H583 2144 aaKnown RBP12.7□□□□□ -0.38
HDDC2-204ENST00000608295 M0R3G1 203 aa12.7□□□□□ -0.38
HDDC2-204ENST00000608295 PDLIM1O00151 329 aa12.7□□□□□ -0.38
HDDC2-204ENST00000608295 SNX3O60493 162 aa12.7□□□□□ -0.38
HDDC2-204ENST00000608295 FMO6PO60774 539 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms