RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 TRPC5OSA6NMA1 111 aa12.91□□□□□ -0.34
CTSA-216ENST00000607212 C5orf58C9J3I9 102 aa12.91□□□□□ -0.34
CTSA-216ENST00000607212 SDHDO14521 159 aa12.91□□□□□ -0.34
CTSA-216ENST00000607212 AKAP8O43823 692 aaKnown RBP12.91□□□□□ -0.34
CTSA-216ENST00000607212 STAMBPO95630 424 aa12.91□□□□□ -0.34
CTSA-216ENST00000607212 CELA3BP08861 270 aa12.91□□□□□ -0.34
CTSA-216ENST00000607212 PNMTP11086 282 aa12.91□□□□□ -0.34
CTSA-216ENST00000607212 EPHA3P29320 983 aa12.91□□□□□ -0.34
CTSA-216ENST00000607212 CALCRP30988 508 aa12.91□□□□□ -0.34
CTSA-216ENST00000607212 THBS2P35442 1172 aa12.91□□□□□ -0.34
CTSA-216ENST00000607212 THBS4P35443 961 aa12.91□□□□□ -0.34
CTSA-216ENST00000607212 ACAA2P42765 397 aaKnown RBP12.91□□□□□ -0.34
CTSA-216ENST00000607212 SH3BGRP55822 239 aaPredicted RBP12.91□□□□□ -0.34
CTSA-216ENST00000607212 ARF1P84077 181 aaKnown RBP12.91□□□□□ -0.34
CTSA-216ENST00000607212 BST1Q10588 318 aa12.91□□□□□ -0.34
CTSA-216ENST00000607212 ZNF311Q5JNZ3 666 aa12.91□□□□□ -0.34
CTSA-216ENST00000607212 OGFOD2Q6N063 350 aa12.91□□□□□ -0.34
CTSA-216ENST00000607212 SERPINA11Q86U17 422 aa12.91□□□□□ -0.34
CTSA-216ENST00000607212 EPHX4Q8IUS5 362 aa12.91□□□□□ -0.34
CTSA-216ENST00000607212 CLIP4Q8N3C7 705 aa12.91□□□□□ -0.34
CTSA-216ENST00000607212 GLB1L3Q8NCI6 653 aaPredicted RBP12.91□□□□□ -0.34
CTSA-216ENST00000607212 NEU4Q8WWR8 484 aaPredicted RBP12.91□□□□□ -0.34
CTSA-216ENST00000607212 TMEM19Q96HH6 336 aa12.91□□□□□ -0.34
CTSA-216ENST00000607212 ANKRD27Q96NW4 1050 aa12.91□□□□□ -0.34
CTSA-216ENST00000607212 SNX18Q96RF0 628 aa12.91□□□□□ -0.34
CTSA-216ENST00000607212 PLK3Q9H4B4 646 aa12.91□□□□□ -0.34
CTSA-216ENST00000607212 WDR55Q9H6Y2 383 aaPredicted RBP12.91□□□□□ -0.34
CTSA-216ENST00000607212 SEC61A2Q9H9S3 476 aa12.91□□□□□ -0.34
CTSA-216ENST00000607212 FBXO9Q9UK97 447 aaPredicted RBP12.91□□□□□ -0.34
CTSA-216ENST00000607212 TCF21O43680 179 aa12.9□□□□□ -0.34
CTSA-216ENST00000607212 SLC22A3O75751 556 aa12.9□□□□□ -0.34
CTSA-216ENST00000607212 IL6P05231 212 aa12.9□□□□□ -0.34
CTSA-216ENST00000607212 PRG2P13727 222 aa12.9□□□□□ -0.34
CTSA-216ENST00000607212 IFNGR1P15260 489 aa12.9□□□□□ -0.34
CTSA-216ENST00000607212 CBLP22681 906 aa12.9□□□□□ -0.34
CTSA-216ENST00000607212 HOXC5Q00444 222 aa12.9□□□□□ -0.34
CTSA-216ENST00000607212 SNTB2Q13425 540 aaKnown RBP12.9□□□□□ -0.34
CTSA-216ENST00000607212 EFNB3Q15768 340 aa12.9□□□□□ -0.34
CTSA-216ENST00000607212 ADRM1Q16186 407 aa12.9□□□□□ -0.34
CTSA-216ENST00000607212 ZSWIM7Q19AV6 140 aa12.9□□□□□ -0.34
CTSA-216ENST00000607212 CEP85LQ5SZL2 805 aa12.9□□□□□ -0.34
CTSA-216ENST00000607212 RNF220Q5VTB9 566 aa12.9□□□□□ -0.34
CTSA-216ENST00000607212 CARD17Q5XLA6 110 aa12.9□□□□□ -0.34
CTSA-216ENST00000607212 KRT80Q6KB66 452 aa12.9□□□□□ -0.34
CTSA-216ENST00000607212 LINGO2Q7L985 606 aa12.9□□□□□ -0.34
CTSA-216ENST00000607212 ZCCHC24Q8N2G6 241 aaKnown RBP12.9□□□□□ -0.34
CTSA-216ENST00000607212 MGARPQ8TDB4 240 aa12.9□□□□□ -0.34
CTSA-216ENST00000607212 STK35Q8TDR2 534 aa12.9□□□□□ -0.34
CTSA-216ENST00000607212 ZNF317Q96PQ6 595 aaPredicted RBP12.9□□□□□ -0.34
CTSA-216ENST00000607212 TMEM109Q9BVC6 243 aa12.9□□□□□ -0.34
CTSA-216ENST00000607212 SPATA9Q9BWV2 254 aa12.9□□□□□ -0.34
CTSA-216ENST00000607212 LINC00470Q9BZP3 86 aa12.9□□□□□ -0.34
CTSA-216ENST00000607212 TPK1Q9H3S4 243 aa12.9□□□□□ -0.34
CTSA-216ENST00000607212 TPT1P8Q9HAU6 139 aa12.9□□□□□ -0.34
CTSA-216ENST00000607212 CRLF2Q9HC73 371 aa12.9□□□□□ -0.34
CTSA-216ENST00000607212 SSU72Q9NP77 194 aaKnown RBP12.9□□□□□ -0.34
CTSA-216ENST00000607212 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.9□□□□□ -0.34
CTSA-216ENST00000607212 IFT52Q9Y366 437 aa12.9□□□□□ -0.34
CTSA-216ENST00000607212 PCDHB14Q9Y5E9 798 aa12.9□□□□□ -0.34
CTSA-216ENST00000607212 V9GYY5 206 aaPredicted RBP12.9□□□□□ -0.34
CTSA-216ENST00000607212 A0A0G2JPF8 293 aa12.89□□□□□ -0.35
CTSA-216ENST00000607212 HNRNPCL2B2RXH8 293 aa12.89□□□□□ -0.35
CTSA-216ENST00000607212 HNRNPCL3B7ZW38 293 aa12.89□□□□□ -0.35
CTSA-216ENST00000607212 AIM2O14862 343 aa12.89□□□□□ -0.35
CTSA-216ENST00000607212 HNRNPCL1O60812 293 aaKnown RBP12.89□□□□□ -0.35
CTSA-216ENST00000607212 SEC14L2O76054 403 aa12.89□□□□□ -0.35
CTSA-216ENST00000607212 HNRNPCL4P0DMR1 293 aa12.89□□□□□ -0.35
CTSA-216ENST00000607212 HOXB1P14653 301 aaPredicted RBP12.89□□□□□ -0.35
CTSA-216ENST00000607212 IDO1P14902 403 aa12.89□□□□□ -0.35
CTSA-216ENST00000607212 CBR1P16152 277 aa12.89□□□□□ -0.35
CTSA-216ENST00000607212 P2RY4P51582 365 aa12.89□□□□□ -0.35
CTSA-216ENST00000607212 CCNIQ14094 377 aa12.89□□□□□ -0.35
CTSA-216ENST00000607212 DAG1Q14118 895 aa12.89□□□□□ -0.35
CTSA-216ENST00000607212 CEACAM16Q2WEN9 425 aa12.89□□□□□ -0.35
CTSA-216ENST00000607212 C3orf36Q3SXR2 165 aa12.89□□□□□ -0.35
CTSA-216ENST00000607212 GTDC1Q4AE62 458 aa12.89□□□□□ -0.35
CTSA-216ENST00000607212 RINLQ6ZS11 566 aa12.89□□□□□ -0.35
CTSA-216ENST00000607212 LINC01356Q8N9X3 169 aa12.89□□□□□ -0.35
CTSA-216ENST00000607212 NUP37Q8NFH4 326 aa12.89□□□□□ -0.35
CTSA-216ENST00000607212 MFSD8Q8NHS3 518 aa12.89□□□□□ -0.35
CTSA-216ENST00000607212 MAGEE2Q8TD90 523 aaPredicted RBP12.89□□□□□ -0.35
CTSA-216ENST00000607212 UBASH3BQ8TF42 649 aa12.89□□□□□ -0.35
CTSA-216ENST00000607212 SLC38A5Q8WUX1 472 aa12.89□□□□□ -0.35
CTSA-216ENST00000607212 CKAP2Q8WWK9 683 aa12.89□□□□□ -0.35
CTSA-216ENST00000607212 ITCHQ96J02 903 aa12.89□□□□□ -0.35
CTSA-216ENST00000607212 THUMPD1Q9NXG2 353 aaKnown RBP12.89□□□□□ -0.35
CTSA-216ENST00000607212 SELENONQ9NZV5 590 aa12.89□□□□□ -0.35
CTSA-216ENST00000607212 CRNNQ9UBG3 495 aaPredicted RBP12.89□□□□□ -0.35
CTSA-216ENST00000607212 TMEFF2Q9UIK5 374 aaPredicted RBP12.89□□□□□ -0.35
CTSA-216ENST00000607212 USP22Q9UPT9 525 aa12.89□□□□□ -0.35
CTSA-216ENST00000607212 NOX1Q9Y5S8 564 aa12.89□□□□□ -0.35
CTSA-216ENST00000607212 GPR45Q9Y5Y3 372 aa12.89□□□□□ -0.35
CTSA-216ENST00000607212 M0R3G1 203 aa12.88□□□□□ -0.35
CTSA-216ENST00000607212 HDAC3O15379 428 aa12.88□□□□□ -0.35
CTSA-216ENST00000607212 ADRA2AP08913 450 aa12.88□□□□□ -0.35
CTSA-216ENST00000607212 CD79AP11912 226 aa12.88□□□□□ -0.35
CTSA-216ENST00000607212 NQO1P15559 274 aaKnown RBP12.88□□□□□ -0.35
CTSA-216ENST00000607212 ARR3P36575 388 aa12.88□□□□□ -0.35
CTSA-216ENST00000607212 NCALDP61601 193 aa12.88□□□□□ -0.35
CTSA-216ENST00000607212 HGFACQ04756 655 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms