RNA–Protein interactions for RNA: ENST00000607092.1

CUX1-220, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-220ENST00000607092 SUCNR1Q9BXA5 334 aa5.46□□□□□ -1.54
CUX1-220ENST00000607092 OR11A1Q9GZK7 315 aa5.46□□□□□ -1.54
CUX1-220ENST00000607092 OR51I1Q9H343 314 aa5.46□□□□□ -1.54
CUX1-220ENST00000607092 TUBB1Q9H4B7 451 aa5.46□□□□□ -1.54
CUX1-220ENST00000607092 SERHL2Q9H4I8 314 aa5.46□□□□□ -1.54
CUX1-220ENST00000607092 METTL17Q9H7H0 456 aaPredicted RBP5.46□□□□□ -1.54
CUX1-220ENST00000607092 TNFRSF12AQ9NP84 129 aa5.46□□□□□ -1.54
CUX1-220ENST00000607092 B3GAT2Q9NPZ5 323 aa5.46□□□□□ -1.54
CUX1-220ENST00000607092 SLC52A3Q9NQ40 469 aa5.46□□□□□ -1.54
CUX1-220ENST00000607092 THUMPD1Q9NXG2 353 aaKnown RBP5.46□□□□□ -1.54
CUX1-220ENST00000607092 MARCOQ9UEW3 520 aaPredicted RBP5.46□□□□□ -1.54
CUX1-220ENST00000607092 KCNE5Q9UJ90 142 aa5.46□□□□□ -1.54
CUX1-220ENST00000607092 PCDHB10Q9UN67 800 aa5.46□□□□□ -1.54
CUX1-220ENST00000607092 NOX1Q9Y5S8 564 aa5.46□□□□□ -1.54
CUX1-220ENST00000607092 PTGDR2Q9Y5Y4 395 aa5.46□□□□□ -1.54
CUX1-220ENST00000607092 A0A1W2PPM1 405 aa5.45□□□□□ -1.54
CUX1-220ENST00000607092 SLC22A23A1A5C7 686 aa5.45□□□□□ -1.54
CUX1-220ENST00000607092 TMEM89A2RUT3 159 aa5.45□□□□□ -1.54
CUX1-220ENST00000607092 LRP5LA4QPB2 252 aa5.45□□□□□ -1.54
CUX1-220ENST00000607092 AGAP5A6NIR3 686 aa5.45□□□□□ -1.54
CUX1-220ENST00000607092 J3QLI3 93 aa5.45□□□□□ -1.54
CUX1-220ENST00000607092 AHSA1O95433 338 aa5.45□□□□□ -1.54
CUX1-220ENST00000607092 KRT75O95678 551 aa5.45□□□□□ -1.54
CUX1-220ENST00000607092 LGI1O95970 557 aa5.45□□□□□ -1.54
CUX1-220ENST00000607092 BCL10O95999 233 aa5.45□□□□□ -1.54
CUX1-220ENST00000607092 PNPP00491 289 aa5.45□□□□□ -1.54
CUX1-220ENST00000607092 MT-ND5P03915 603 aa5.45□□□□□ -1.54
CUX1-220ENST00000607092 GSNP06396 782 aa5.45□□□□□ -1.54
CUX1-220ENST00000607092 MSMBP08118 114 aa5.45□□□□□ -1.54
CUX1-220ENST00000607092 CHRM4P08173 479 aa5.45□□□□□ -1.54
CUX1-220ENST00000607092 TFPTP0C1Z6 253 aa5.45□□□□□ -1.54
CUX1-220ENST00000607092 CECR9P0C854 216 aa5.45□□□□□ -1.54
CUX1-220ENST00000607092 MYZAPP0CAP1 466 aa5.45□□□□□ -1.54
CUX1-220ENST00000607092 SAGP10523 405 aaPredicted RBP5.45□□□□□ -1.54
CUX1-220ENST00000607092 G6PDP11413 515 aa5.45□□□□□ -1.54
CUX1-220ENST00000607092 IMPDH2P12268 514 aa5.45□□□□□ -1.54
CUX1-220ENST00000607092 ZNF43P17038 809 aa5.45□□□□□ -1.54
CUX1-220ENST00000607092 CCNA2P20248 432 aa5.45□□□□□ -1.54
CUX1-220ENST00000607092 ACHEP22303 614 aa5.45□□□□□ -1.54
CUX1-220ENST00000607092 FPR2P25090 351 aa5.45□□□□□ -1.54
CUX1-220ENST00000607092 HILS1P60008 231 aa5.45□□□□□ -1.54
CUX1-220ENST00000607092 RPS26P62854 115 aaKnown RBP5.45□□□□□ -1.54
CUX1-220ENST00000607092 SLC25A3Q00325 362 aa5.45□□□□□ -1.54
CUX1-220ENST00000607092 GALK2Q01415 458 aa5.45□□□□□ -1.54
CUX1-220ENST00000607092 IL1RL1Q01638 556 aa5.45□□□□□ -1.54
CUX1-220ENST00000607092 TEKQ02763 1124 aa5.45□□□□□ -1.54
CUX1-220ENST00000607092 LGALS3BPQ08380 585 aa5.45□□□□□ -1.54
CUX1-220ENST00000607092 CEACAM7Q14002 265 aa5.45□□□□□ -1.54
CUX1-220ENST00000607092 PCLAFQ15004 111 aa5.45□□□□□ -1.54
CUX1-220ENST00000607092 LARS2Q15031 903 aaKnown RBP5.45□□□□□ -1.54
CUX1-220ENST00000607092 OR7A5Q15622 319 aa5.45□□□□□ -1.54
CUX1-220ENST00000607092 ADRM1Q16186 407 aa5.45□□□□□ -1.54
CUX1-220ENST00000607092 MAPK14Q16539 360 aa5.45□□□□□ -1.54
CUX1-220ENST00000607092 TRMT5Q32P41 509 aaKnown RBP5.45□□□□□ -1.54
CUX1-220ENST00000607092 PCGF3Q3KNV8 242 aa5.45□□□□□ -1.54
CUX1-220ENST00000607092 UGT3A2Q3SY77 523 aa5.45□□□□□ -1.54
CUX1-220ENST00000607092 LIN52Q52LA3 116 aa5.45□□□□□ -1.54
CUX1-220ENST00000607092 SAXO2Q658L1 398 aa5.45□□□□□ -1.54
CUX1-220ENST00000607092 NIPAL3Q6P499 406 aa5.45□□□□□ -1.54
CUX1-220ENST00000607092 TNFAIP8L2Q6P589 184 aaPredicted RBP5.45□□□□□ -1.54
CUX1-220ENST00000607092 VHLLQ6RSH7 139 aa5.45□□□□□ -1.54
CUX1-220ENST00000607092 RBMS3Q6XE24 437 aaKnown RBP5.45□□□□□ -1.54
CUX1-220ENST00000607092 FRRS1Q6ZNA5 592 aa5.45□□□□□ -1.54
CUX1-220ENST00000607092 RINLQ6ZS11 566 aa5.45□□□□□ -1.54
CUX1-220ENST00000607092 CREB3L2Q70SY1 520 aa5.45□□□□□ -1.54
CUX1-220ENST00000607092 NET1Q7Z628 596 aaPredicted RBP5.45□□□□□ -1.54
CUX1-220ENST00000607092 LINC00528Q8N1L1 170 aa5.45□□□□□ -1.54
CUX1-220ENST00000607092 GPR137CQ8N3F9 429 aa5.45□□□□□ -1.54
CUX1-220ENST00000607092 KRTCAP2Q8N6L1 136 aa5.45□□□□□ -1.54
CUX1-220ENST00000607092 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.45□□□□□ -1.54
CUX1-220ENST00000607092 TMEM99Q8N816 258 aa5.45□□□□□ -1.54
CUX1-220ENST00000607092 SEMA6DQ8NFY4 1073 aa5.45□□□□□ -1.54
CUX1-220ENST00000607092 MFSD8Q8NHS3 518 aa5.45□□□□□ -1.54
CUX1-220ENST00000607092 RAB39BQ96DA2 213 aa5.45□□□□□ -1.54
CUX1-220ENST00000607092 APOPT1Q96IL0 206 aa5.45□□□□□ -1.54
CUX1-220ENST00000607092 ZNF385DQ9H6B1 395 aa5.45□□□□□ -1.54
CUX1-220ENST00000607092 ZMAT3Q9HA38 289 aaKnown RBP5.45□□□□□ -1.54
CUX1-220ENST00000607092 NTN4Q9HB63 628 aa5.45□□□□□ -1.54
CUX1-220ENST00000607092 HIF1ANQ9NWT6 349 aa5.45□□□□□ -1.54
CUX1-220ENST00000607092 ADPRHL2Q9NX46 363 aa5.45□□□□□ -1.54
CUX1-220ENST00000607092 NUP214P35658 2090 aaPredicted RBP5.44□□□□□ -1.54
CUX1-220ENST00000607092 VWFP04275 2813 aa5.44□□□□□ -1.54
CUX1-220ENST00000607092 IGHV2OR16-5A0A0B4J2B6 119 aa5.44□□□□□ -1.54
CUX1-220ENST00000607092 A0A0G2JMP0 313 aa5.44□□□□□ -1.54
CUX1-220ENST00000607092 A0A0X1KG70 313 aa5.44□□□□□ -1.54
CUX1-220ENST00000607092 TMEM72A0PK05 275 aa5.44□□□□□ -1.54
CUX1-220ENST00000607092 AIM2O14862 343 aa5.44□□□□□ -1.54
CUX1-220ENST00000607092 WIPF1O43516 503 aa5.44□□□□□ -1.54
CUX1-220ENST00000607092 SKAP2O75563 359 aaPredicted RBP5.44□□□□□ -1.54
CUX1-220ENST00000607092 ZNF432O94892 652 aa5.44□□□□□ -1.54
CUX1-220ENST00000607092 AKR7A3O95154 331 aa5.44□□□□□ -1.54
CUX1-220ENST00000607092 NR2F1P10589 423 aa5.44□□□□□ -1.54
CUX1-220ENST00000607092 NCF2P19878 526 aaPredicted RBP5.44□□□□□ -1.54
CUX1-220ENST00000607092 EPHA1P21709 976 aa5.44□□□□□ -1.54
CUX1-220ENST00000607092 NR4A1P22736 598 aa5.44□□□□□ -1.54
CUX1-220ENST00000607092 NTF4P34130 210 aa5.44□□□□□ -1.54
CUX1-220ENST00000607092 THBS4P35443 961 aa5.44□□□□□ -1.54
CUX1-220ENST00000607092 GLRXP35754 106 aa5.44□□□□□ -1.54
CUX1-220ENST00000607092 CAPZA2P47755 286 aa5.44□□□□□ -1.54
CUX1-220ENST00000607092 ARFIP2P53365 341 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms