RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 PTGFRNQ9P2B2 879 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 KLHL9Q9P2J3 617 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 UXTQ9UBK9 157 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 CA14Q9ULX7 337 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 TNFSF18Q9UNG2 199 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 ST3GAL5Q9UNP4 418 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 ICKQ9UPZ9 632 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 FAM50BQ9Y247 325 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 ANGPT4Q9Y264 503 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 RASD1Q9Y272 281 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 KCNIP3Q9Y2W7 256 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 MTCH2Q9Y6C9 303 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 PIAS3Q9Y6X2 628 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 PIKFYVEQ9Y2I7 2098 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 PTPRDP23468 1912 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 PHIPQ8WWQ0 1821 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 TBC1D3DA0A087WVF3 549 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 TBC1D3IA0A087WXS9 549 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 TBC1D3EA0A087X179 549 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 TBC1D3KA0A087X1G2 549 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 CCDC187A0A096LP49 1063 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 TRBV6-7A0A0A0MS04 114 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 TRBV23-1A0A0A0MS06 115 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 TRAV14DV4A0A0A6YYC5 116 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 TRBV4-1A0A0J9YWV2 114 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 SMIM28A0A1B0GU29 152 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 C2orf92A0A1B0GVN3 265 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 TMEM72A0PK05 275 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 METTL21EPA6NDL7 271 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 TBC1D3FA6NER0 549 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 NCF1BA6NI72 391 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 TMEM200CA6NKL6 621 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 NCF1CA8MVU1 366 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 SEC14L6B5MCN3 397 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 TBC1D3LB9A6J9 549 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 E9PI62 339 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 J3KTA2 159 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 M0R129 80 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 SCAMP2O15127 329 aaKnown RBP3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 ARPC1BO15143 372 aaKnown RBP3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 EMC8O43402 210 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 MBTPS2O43462 519 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 CLDN11O75508 207 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 SLC25A12O75746 678 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 ARL6IP5O75915 188 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 NCR1O76036 304 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 C22orf31O95567 290 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 CPSF4O95639 269 aaKnown RBP3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 PMS2P2O95744 297 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 FGF19O95750 216 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 AK1P00568 194 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 IFNA17P01571 189 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 MT-ND4P03905 459 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 CD74P04233 296 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 CRHP06850 196 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 ITGA5P08648 1049 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 ANXA5P08758 320 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 SPARCP09486 303 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 LINC00614P0C842 121 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 OR12D1P0DN82 309 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 VSIG10L2P0DP72 767 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 CALCBP10092 127 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 LAMP1P11279 417 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 COX7A2P14406 83 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 NDUFB7P17568 137 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 DRD5P21918 477 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 MPZP25189 248 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 HMGB2P26583 209 aaKnown RBP3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 DDTP30046 118 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 BDKRB2P30411 391 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 FAUP35544 74 aaKnown RBP3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 IFNGR2P38484 337 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 SLC6A12P48065 614 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 SLC6A9P48067 706 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 NPBWR1P48145 328 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 PPM1FP49593 454 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 CAV2P51636 162 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 PNLIPRP1P54315 467 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 ADPRHP54922 357 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 LIM2P55344 173 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 UCP2P55851 309 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 H2BFSP57053 126 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 SLC26A5P58743 744 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 BPIFB3P59826 476 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 RAP1AP62834 184 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 CACNG1Q06432 222 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 SLC10A7Q0GE19 358 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 PDE7AQ13946 482 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 RAB33AQ14088 237 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 IRF4Q15306 451 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 TEAD2Q15562 447 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 ALG11Q2TAA5 492 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 MST1LQ2TV78 715 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 MS4A13Q5J8X5 152 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 UBE2NLQ5JXB2 153 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 SLC35D3Q5M8T2 416 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 MARCH8Q5T0T0 291 aa3.72□□□□□ -1.81
HMGB1P50-201ENST00000605814 FRG2Q64ET8 278 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms