RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 A0A1W2PPR1 153 aa10.17□□□□□ -0.78
CCDC12-209ENST00000604164 M0R082 166 aa10.17□□□□□ -0.78
CCDC12-209ENST00000604164 PDLIM1O00151 329 aa10.17□□□□□ -0.78
CCDC12-209ENST00000604164 GSTA4O15217 222 aa10.17□□□□□ -0.78
CCDC12-209ENST00000604164 CLOCKO15516 846 aa10.17□□□□□ -0.78
CCDC12-209ENST00000604164 TPST2O60704 377 aa10.17□□□□□ -0.78
CCDC12-209ENST00000604164 SLC43A1O75387 559 aa10.17□□□□□ -0.78
CCDC12-209ENST00000604164 OR6A2O95222 327 aa10.17□□□□□ -0.78
CCDC12-209ENST00000604164 HIST1H2ABP04908 130 aa10.17□□□□□ -0.78
CCDC12-209ENST00000604164 ITGA5P08648 1049 aa10.17□□□□□ -0.78
CCDC12-209ENST00000604164 EDNRAP25101 427 aa10.17□□□□□ -0.78
CCDC12-209ENST00000604164 PTAFRP25105 342 aa10.17□□□□□ -0.78
CCDC12-209ENST00000604164 GRPRP30550 384 aa10.17□□□□□ -0.78
CCDC12-209ENST00000604164 KDELR2P33947 212 aa10.17□□□□□ -0.78
CCDC12-209ENST00000604164 NTF4P34130 210 aa10.17□□□□□ -0.78
CCDC12-209ENST00000604164 PRPS1P60891 318 aa10.17□□□□□ -0.78
CCDC12-209ENST00000604164 PMS2P3Q13401 168 aa10.17□□□□□ -0.78
CCDC12-209ENST00000604164 NPTX1Q15818 432 aa10.17□□□□□ -0.78
CCDC12-209ENST00000604164 TSPO2Q5TGU0 170 aa10.17□□□□□ -0.78
CCDC12-209ENST00000604164 SHEQ5VZ18 495 aa10.17□□□□□ -0.78
CCDC12-209ENST00000604164 HMBOX1Q6NT76 420 aa10.17□□□□□ -0.78
CCDC12-209ENST00000604164 NIPAL3Q6P499 406 aa10.17□□□□□ -0.78
CCDC12-209ENST00000604164 HIST3H2AQ7L7L0 130 aa10.17□□□□□ -0.78
CCDC12-209ENST00000604164 CARM1Q86X55 608 aa10.17□□□□□ -0.78
CCDC12-209ENST00000604164 UEVLDQ8IX04 471 aa10.17□□□□□ -0.78
CCDC12-209ENST00000604164 ZNF611Q8N823 705 aa10.17□□□□□ -0.78
CCDC12-209ENST00000604164 PIK3C3Q8NEB9 887 aa10.17□□□□□ -0.78
CCDC12-209ENST00000604164 ZNF417Q8TAU3 575 aa10.17□□□□□ -0.78
CCDC12-209ENST00000604164 TMEM171Q8WVE6 324 aa10.17□□□□□ -0.78
CCDC12-209ENST00000604164 HIST1H2ACQ93077 130 aa10.17□□□□□ -0.78
CCDC12-209ENST00000604164 BOD1Q96IK1 185 aa10.17□□□□□ -0.78
CCDC12-209ENST00000604164 ZNF385AQ96PM9 386 aaKnown RBP10.17□□□□□ -0.78
CCDC12-209ENST00000604164 HS3ST6Q96QI5 342 aa10.17□□□□□ -0.78
CCDC12-209ENST00000604164 ZNF587Q96SQ5 575 aaPredicted RBP10.17□□□□□ -0.78
CCDC12-209ENST00000604164 PRR14Q9BWN1 585 aa10.17□□□□□ -0.78
CCDC12-209ENST00000604164 RSPO3Q9BXY4 272 aaPredicted RBP10.17□□□□□ -0.78
CCDC12-209ENST00000604164 FAIMQ9NVQ4 179 aa10.17□□□□□ -0.78
CCDC12-209ENST00000604164 MRPL39Q9NYK5 338 aaKnown RBP10.17□□□□□ -0.78
CCDC12-209ENST00000604164 SLC7A7Q9UM01 511 aa10.17□□□□□ -0.78
CCDC12-209ENST00000604164 SH3GLB1Q9Y371 365 aa10.17□□□□□ -0.78
CCDC12-209ENST00000604164 NOX1Q9Y5S8 564 aa10.17□□□□□ -0.78
CCDC12-209ENST00000604164 ABCA4P78363 2273 aa10.16□□□□□ -0.78
CCDC12-209ENST00000604164 HTR3EA5X5Y0 456 aa10.16□□□□□ -0.78
CCDC12-209ENST00000604164 DYNC1I1O14576 645 aa10.16□□□□□ -0.78
CCDC12-209ENST00000604164 SNX3O60493 162 aa10.16□□□□□ -0.78
CCDC12-209ENST00000604164 GMNNO75496 209 aa10.16□□□□□ -0.78
CCDC12-209ENST00000604164 OR5F1O95221 314 aa10.16□□□□□ -0.78
CCDC12-209ENST00000604164 BGLAPP02818 100 aa10.16□□□□□ -0.78
CCDC12-209ENST00000604164 THRBP10828 461 aa10.16□□□□□ -0.78
CCDC12-209ENST00000604164 HOXB1P14653 301 aaPredicted RBP10.16□□□□□ -0.78
CCDC12-209ENST00000604164 RBM34P42696 430 aaKnown RBP10.16□□□□□ -0.78
CCDC12-209ENST00000604164 NUDT2P50583 147 aa10.16□□□□□ -0.78
CCDC12-209ENST00000604164 SEC24CP53992 1094 aa10.16□□□□□ -0.78
CCDC12-209ENST00000604164 CLDN17P56750 224 aa10.16□□□□□ -0.78
CCDC12-209ENST00000604164 TAS2R41P59536 307 aa10.16□□□□□ -0.78
CCDC12-209ENST00000604164 GNGT1P63211 74 aa10.16□□□□□ -0.78
CCDC12-209ENST00000604164 BSPH1Q075Z2 132 aa10.16□□□□□ -0.78
CCDC12-209ENST00000604164 PUDPQ08623 228 aa10.16□□□□□ -0.78
CCDC12-209ENST00000604164 GABRA6Q16445 453 aa10.16□□□□□ -0.78
CCDC12-209ENST00000604164 LRRC23Q53EV4 343 aaPredicted RBP10.16□□□□□ -0.78
CCDC12-209ENST00000604164 CYBRD1Q53TN4 286 aa10.16□□□□□ -0.78
CCDC12-209ENST00000604164 LINC00114Q6XXX2 140 aa10.16□□□□□ -0.78
CCDC12-209ENST00000604164 TGIF2LYQ8IUE0 185 aa10.16□□□□□ -0.78
CCDC12-209ENST00000604164 EPHX4Q8IUS5 362 aa10.16□□□□□ -0.78
CCDC12-209ENST00000604164 P3H2Q8IVL5 708 aa10.16□□□□□ -0.78
CCDC12-209ENST00000604164 GPR137CQ8N3F9 429 aa10.16□□□□□ -0.78
CCDC12-209ENST00000604164 OR52N5Q8NH56 324 aa10.16□□□□□ -0.78
CCDC12-209ENST00000604164 AKAP1Q92667 903 aaKnown RBP eCLIP10.16□□□□□ -0.78
CCDC12-209ENST00000604164 FBXW5Q969U6 566 aa10.16□□□□□ -0.78
CCDC12-209ENST00000604164 SLC41A3Q96GZ6 507 aa10.16□□□□□ -0.78
CCDC12-209ENST00000604164 HS6ST2Q96MM7 605 aa10.16□□□□□ -0.78
CCDC12-209ENST00000604164 FKRPQ9H9S5 495 aa10.16□□□□□ -0.78
CCDC12-209ENST00000604164 B3GAT2Q9NPZ5 323 aa10.16□□□□□ -0.78
CCDC12-209ENST00000604164 NANSQ9NR45 359 aa10.16□□□□□ -0.78
CCDC12-209ENST00000604164 SLC17A5Q9NRA2 495 aa10.16□□□□□ -0.78
CCDC12-209ENST00000604164 SLC25A15Q9Y619 301 aa10.16□□□□□ -0.78
CCDC12-209ENST00000604164 SPG11Q96JI7 2443 aa10.16□□□□□ -0.78
CCDC12-209ENST00000604164 TACC2O95359 2948 aa10.16□□□□□ -0.78
CCDC12-209ENST00000604164 ENTPD5O75356 428 aa10.15□□□□□ -0.78
CCDC12-209ENST00000604164 DCTN3O75935 186 aa10.15□□□□□ -0.78
CCDC12-209ENST00000604164 IGF2P01344 180 aa10.15□□□□□ -0.78
CCDC12-209ENST00000604164 DRD4P21917 467 aa10.15□□□□□ -0.78
CCDC12-209ENST00000604164 SELENOPP49908 381 aa10.15□□□□□ -0.78
CCDC12-209ENST00000604164 UBE2NP61088 152 aaKnown RBP10.15□□□□□ -0.78
CCDC12-209ENST00000604164 SELENOWP63302 87 aa10.15□□□□□ -0.78
CCDC12-209ENST00000604164 NKX6-1P78426 367 aaPredicted RBP10.15□□□□□ -0.78
CCDC12-209ENST00000604164 LIPEQ05469 1076 aa10.15□□□□□ -0.78
CCDC12-209ENST00000604164 ZNF672Q499Z4 452 aaPredicted RBP10.15□□□□□ -0.78
CCDC12-209ENST00000604164 ANKRD16Q6P6B7 361 aa10.15□□□□□ -0.78
CCDC12-209ENST00000604164 PRSS57Q6UWY2 283 aa10.15□□□□□ -0.78
CCDC12-209ENST00000604164 DEF8Q6ZN54 512 aa10.15□□□□□ -0.78
CCDC12-209ENST00000604164 PXKQ7Z7A4 578 aa10.15□□□□□ -0.78
CCDC12-209ENST00000604164 SLC15A3Q8IY34 581 aa10.15□□□□□ -0.78
CCDC12-209ENST00000604164 CCDC36Q8IYA8 594 aa10.15□□□□□ -0.78
CCDC12-209ENST00000604164 OR5J2Q8NH18 312 aa10.15□□□□□ -0.78
CCDC12-209ENST00000604164 MAGEE2Q8TD90 523 aaPredicted RBP10.15□□□□□ -0.78
CCDC12-209ENST00000604164 TPD52L3Q96J77 140 aa10.15□□□□□ -0.78
CCDC12-209ENST00000604164 LRR1Q96L50 414 aa10.15□□□□□ -0.78
CCDC12-209ENST00000604164 WFDC6Q9BQY6 131 aa10.15□□□□□ -0.78
CCDC12-209ENST00000604164 MYLK2Q9H1R3 596 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms