RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 MRPL2Q5T653 305 aaKnown RBP8.95□□□□□ -0.98
CSMD1-217ENST00000602723 SFXN4Q6P4A7 337 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 OR7D2Q96RA2 312 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 C1GALT1Q9NS00 363 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 TIMP2P16035 220 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 GM2AP17900 193 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 LAP3P28838 519 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 RPE65Q16518 533 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 C15orf39Q6ZRI6 1047 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 SSX9Q7RTT3 188 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 TP53INP2Q8IXH6 220 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 OR2T11Q8NH01 316 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 MED17Q9NVC6 651 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 GNG12Q9UBI6 72 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 NACAE9PAV3 2078 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 ARFGEF3Q5TH69 2177 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 GLSO94925 669 aaPredicted RBP8.95□□□□□ -0.98
CSMD1-217ENST00000602723 IKZF1Q13422 519 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 HNF4GQ14541 408 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 LTB4RQ15722 352 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 PLK5Q496M5 336 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 GCNT2Q8N0V5 402 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 CNEP1R1Q8N9A8 125 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 DMBX1Q8NFW5 382 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 OR1S2Q8NGQ3 325 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 I6L893 689 aaPredicted RBP8.95□□□□□ -0.98
CSMD1-217ENST00000602723 ADAMTS4O75173 837 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 SLC2A1P11166 492 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 CLDN10P78369 228 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 SCN5AQ14524 2016 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 SF3B4Q15427 424 aaKnown RBP eCLIP8.95□□□□□ -0.986e-6■■□□□ 11.8
CSMD1-217ENST00000602723 RNF141Q8WVD5 230 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 CCNL2Q96S94 520 aaPredicted RBP8.95□□□□□ -0.98
CSMD1-217ENST00000602723 CMSS1Q9BQ75 279 aaKnown RBP8.95□□□□□ -0.98
CSMD1-217ENST00000602723 ALG12Q9BV10 488 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 GPR62Q9BZJ7 368 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 PATZ1Q9HBE1 687 aaKnown RBP8.95□□□□□ -0.98
CSMD1-217ENST00000602723 PCDHB10Q9UN67 800 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 LRP6O75581 1613 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 LRP5LA4QPB2 252 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 NUDT1P36639 197 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 OR2G6Q5TZ20 316 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 CNTN4Q8IWV2 1026 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 FOXJ1Q92949 421 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 TREX1Q9NSU2 369 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 EMCNQ9ULC0 261 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 HTR2CP28335 458 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 PIANPQ8IYJ0 282 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 MED30Q96HR3 178 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 TPPP3Q9BW30 176 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 TXNDC12O95881 172 aa8.94□□□□□ -0.98
CSMD1-217ENST00000602723 ANXA7P20073 488 aaKnown RBP8.94□□□□□ -0.98
CSMD1-217ENST00000602723 HTR4Q13639 388 aa8.94□□□□□ -0.98
CSMD1-217ENST00000602723 HPSE2Q8WWQ2 592 aa8.94□□□□□ -0.98
CSMD1-217ENST00000602723 C3orf30Q96M34 536 aa8.94□□□□□ -0.98
CSMD1-217ENST00000602723 C16orf70Q9BSU1 422 aa8.94□□□□□ -0.98
CSMD1-217ENST00000602723 NDUFA6P56556 154 aa8.94□□□□□ -0.98
CSMD1-217ENST00000602723 SLC5A12Q1EHB4 618 aa8.94□□□□□ -0.98
CSMD1-217ENST00000602723 OR52R1Q8NGF1 315 aa8.94□□□□□ -0.98
CSMD1-217ENST00000602723 OR4A16Q8NH70 328 aa8.94□□□□□ -0.98
CSMD1-217ENST00000602723 PCNPQ8WW12 178 aaKnown RBP8.94□□□□□ -0.98
CSMD1-217ENST00000602723 NFYBP25208 207 aa8.94□□□□□ -0.98
CSMD1-217ENST00000602723 GABRA2P47869 451 aa8.94□□□□□ -0.98
CSMD1-217ENST00000602723 P2RX1P51575 399 aa8.94□□□□□ -0.98
CSMD1-217ENST00000602723 ADIRFQ15847 76 aa8.94□□□□□ -0.98
CSMD1-217ENST00000602723 OR5M10Q6IEU7 315 aa8.94□□□□□ -0.98
CSMD1-217ENST00000602723 RBMXL3Q8N7X1 1067 aaKnown RBP8.94□□□□□ -0.98
CSMD1-217ENST00000602723 OR52H1Q8NGJ2 320 aa8.94□□□□□ -0.98
CSMD1-217ENST00000602723 PIGCQ92535 297 aa8.94□□□□□ -0.98
CSMD1-217ENST00000602723 MRPL38Q96DV4 380 aaKnown RBP8.94□□□□□ -0.98
CSMD1-217ENST00000602723 SGPP1Q9BX95 441 aa8.94□□□□□ -0.98
CSMD1-217ENST00000602723 SELENOIQ9C0D9 397 aa8.94□□□□□ -0.98
CSMD1-217ENST00000602723 EXO1Q9UQ84 846 aaKnown RBP8.94□□□□□ -0.98
CSMD1-217ENST00000602723 CCR6P51684 374 aa8.94□□□□□ -0.98
CSMD1-217ENST00000602723 ILKQ13418 452 aa8.94□□□□□ -0.98
CSMD1-217ENST00000602723 INTS12Q96CB8 462 aaKnown RBP8.94□□□□□ -0.98
CSMD1-217ENST00000602723 NAA50Q9GZZ1 169 aaKnown RBP8.94□□□□□ -0.98
CSMD1-217ENST00000602723 PIAS3Q9Y6X2 628 aa8.94□□□□□ -0.98
CSMD1-217ENST00000602723 ACOD1A6NK06 481 aa8.94□□□□□ -0.98
CSMD1-217ENST00000602723 ARNTLO00327 626 aa8.94□□□□□ -0.98
CSMD1-217ENST00000602723 KCNK5O95279 499 aa8.94□□□□□ -0.98
CSMD1-217ENST00000602723 CAMK2BQ13554 666 aa8.94□□□□□ -0.98
CSMD1-217ENST00000602723 ZNF266Q14584 549 aa8.94□□□□□ -0.98
CSMD1-217ENST00000602723 ZNF852Q6ZMS4 543 aa8.94□□□□□ -0.98
CSMD1-217ENST00000602723 Q6ZSR6 202 aa8.94□□□□□ -0.98
CSMD1-217ENST00000602723 KATNB1Q9BVA0 655 aa8.94□□□□□ -0.98
CSMD1-217ENST00000602723 MROH6A6NGR9 719 aa8.94□□□□□ -0.98
CSMD1-217ENST00000602723 C1orf105O95561 183 aa8.94□□□□□ -0.98
CSMD1-217ENST00000602723 P2RY2P41231 377 aa8.94□□□□□ -0.98
CSMD1-217ENST00000602723 BAXQ07812 192 aa8.94□□□□□ -0.98
CSMD1-217ENST00000602723 LEXMQ3ZCV2 418 aa8.94□□□□□ -0.98
CSMD1-217ENST00000602723 ZMAT1Q5H9K5 638 aa8.94□□□□□ -0.98
CSMD1-217ENST00000602723 MAMDC4Q6UXC1 1216 aa8.94□□□□□ -0.98
CSMD1-217ENST00000602723 SHISA6Q6ZSJ9 500 aa8.94□□□□□ -0.98
CSMD1-217ENST00000602723 NAA40Q86UY6 237 aa8.94□□□□□ -0.98
CSMD1-217ENST00000602723 LFNGQ8NES3 379 aa8.94□□□□□ -0.98
CSMD1-217ENST00000602723 UTP4Q969X6 686 aaKnown RBP8.94□□□□□ -0.98
CSMD1-217ENST00000602723 CPNE4Q96A23 557 aaPredicted RBP8.94□□□□□ -0.98
CSMD1-217ENST00000602723 CA14Q9ULX7 337 aa8.94□□□□□ -0.98
CSMD1-217ENST00000602723 KCPQ6ZWJ8 1503 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms