RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 MAKP20794 623 aa16.79■□□□□ 0.28
CCDC9-205ENST00000600117 CBLP22681 906 aa16.79■□□□□ 0.28
CCDC9-205ENST00000600117 ADORA2A-AS1P86434 159 aa16.79■□□□□ 0.28
CCDC9-205ENST00000600117 MFSD13AQ14CX5 517 aa16.79■□□□□ 0.28
CCDC9-205ENST00000600117 PPP4R4Q6NUP7 873 aa16.79■□□□□ 0.28
CCDC9-205ENST00000600117 P4HA3Q7Z4N8 544 aa16.79■□□□□ 0.28
CCDC9-205ENST00000600117 CCDC103Q8IW40 242 aa16.79■□□□□ 0.28
CCDC9-205ENST00000600117 C10orf53Q8N6V4 93 aa16.79■□□□□ 0.28
CCDC9-205ENST00000600117 LRRC17Q8N6Y2 441 aa16.79■□□□□ 0.28
CCDC9-205ENST00000600117 NAXEQ8NCW5 288 aa16.79■□□□□ 0.28
CCDC9-205ENST00000600117 ZNF417Q8TAU3 575 aa16.79■□□□□ 0.28
CCDC9-205ENST00000600117 ABHD3Q8WU67 409 aa16.79■□□□□ 0.28
CCDC9-205ENST00000600117 LIPHQ8WWY8 451 aa16.79■□□□□ 0.28
CCDC9-205ENST00000600117 ZNF587Q96SQ5 575 aaPredicted RBP16.79■□□□□ 0.28
CCDC9-205ENST00000600117 TM9SF2Q99805 663 aa16.79■□□□□ 0.28
CCDC9-205ENST00000600117 NAA11Q9BSU3 229 aaPredicted RBP16.79■□□□□ 0.28
CCDC9-205ENST00000600117 PRRG4Q9BZD6 226 aa16.79■□□□□ 0.28
CCDC9-205ENST00000600117 REEP1Q9H902 201 aa16.79■□□□□ 0.28
CCDC9-205ENST00000600117 FKRPQ9H9S5 495 aa16.79■□□□□ 0.28
CCDC9-205ENST00000600117 DNAJB9Q9UBS3 223 aa16.79■□□□□ 0.28
CCDC9-205ENST00000600117 SAMHD1Q9Y3Z3 626 aaKnown RBP16.79■□□□□ 0.28
CCDC9-205ENST00000600117 A0A0G2JNJ9 132 aa16.78■□□□□ 0.28
CCDC9-205ENST00000600117 ZNF716A6NP11 495 aa16.78■□□□□ 0.28
CCDC9-205ENST00000600117 CLOCKO15516 846 aa16.78■□□□□ 0.28
CCDC9-205ENST00000600117 OMPP47874 163 aa16.78■□□□□ 0.28
CCDC9-205ENST00000600117 IST1P53990 364 aa16.78■□□□□ 0.28
CCDC9-205ENST00000600117 GK3PQ14409 553 aa16.78■□□□□ 0.28
CCDC9-205ENST00000600117 GUSBP1Q15486 140 aa16.78■□□□□ 0.28
CCDC9-205ENST00000600117 ATP6AP1Q15904 470 aa16.78■□□□□ 0.28
CCDC9-205ENST00000600117 OTUD3Q5T2D3 398 aaPredicted RBP16.78■□□□□ 0.28
CCDC9-205ENST00000600117 ZFP1Q6P2D0 407 aa16.78■□□□□ 0.28
CCDC9-205ENST00000600117 TMEM179BQ7Z7N9 219 aa16.78■□□□□ 0.28
CCDC9-205ENST00000600117 CDH24Q86UP0 819 aa16.78■□□□□ 0.28
CCDC9-205ENST00000600117 MEX3DQ86XN8 651 aaKnown RBP16.78■□□□□ 0.28
CCDC9-205ENST00000600117 SLC43A2Q8N370 569 aa16.78■□□□□ 0.28
CCDC9-205ENST00000600117 ADPRHL1Q8NDY3 354 aa16.78■□□□□ 0.28
CCDC9-205ENST00000600117 BPIFA2Q96DR5 249 aa16.78■□□□□ 0.28
CCDC9-205ENST00000600117 NTN4Q9HB63 628 aa16.78■□□□□ 0.28
CCDC9-205ENST00000600117 MRPL39Q9NYK5 338 aaKnown RBP16.78■□□□□ 0.28
CCDC9-205ENST00000600117 Q9UFV3 132 aa16.78■□□□□ 0.28
CCDC9-205ENST00000600117 ZNF229Q9UJW7 825 aa16.78■□□□□ 0.28
CCDC9-205ENST00000600117 CORINQ9Y5Q5 1042 aa16.78■□□□□ 0.28
CCDC9-205ENST00000600117 ACANP16112 2415 aa16.77■□□□□ 0.28
CCDC9-205ENST00000600117 KLF4O43474 513 aa16.77■□□□□ 0.28
CCDC9-205ENST00000600117 ASAH2BP0C7U1 165 aa16.77■□□□□ 0.28
CCDC9-205ENST00000600117 FUT1P19526 365 aa16.77■□□□□ 0.28
CCDC9-205ENST00000600117 SLC16A1P53985 500 aa16.77■□□□□ 0.28
CCDC9-205ENST00000600117 KRTAP10-9P60411 292 aa16.77■□□□□ 0.28
CCDC9-205ENST00000600117 FOXF2Q12947 444 aa16.77■□□□□ 0.28
CCDC9-205ENST00000600117 PDK3Q15120 406 aa16.77■□□□□ 0.28
CCDC9-205ENST00000600117 RNPS1Q15287 305 aaKnown RBP16.77■□□□□ 0.28
CCDC9-205ENST00000600117 OR2A2Q6IF42 318 aa16.77■□□□□ 0.28
CCDC9-205ENST00000600117 ZNF770Q6IQ21 691 aaPredicted RBP16.77■□□□□ 0.28
CCDC9-205ENST00000600117 XKRXQ6PP77 449 aa16.77■□□□□ 0.28
CCDC9-205ENST00000600117 TMPRSS11FQ6ZWK6 438 aa16.77■□□□□ 0.28
CCDC9-205ENST00000600117 H1FNTQ75WM6 255 aaPredicted RBP16.77■□□□□ 0.28
CCDC9-205ENST00000600117 ZER1Q7Z7L7 766 aa16.77■□□□□ 0.28
CCDC9-205ENST00000600117 GCNT2Q8N0V5 402 aa16.77■□□□□ 0.28
CCDC9-205ENST00000600117 SCAIQ8N9R8 606 aa16.77■□□□□ 0.28
CCDC9-205ENST00000600117 OR5J2Q8NH18 312 aa16.77■□□□□ 0.28
CCDC9-205ENST00000600117 PIGXQ8TBF5 258 aa16.77■□□□□ 0.28
CCDC9-205ENST00000600117 ZFP3Q96NJ6 502 aa16.77■□□□□ 0.28
CCDC9-205ENST00000600117 PSD2Q9BQI7 771 aa16.77■□□□□ 0.28
CCDC9-205ENST00000600117 ASPNQ9BXN1 380 aa16.77■□□□□ 0.28
CCDC9-205ENST00000600117 NANSQ9NR45 359 aa16.77■□□□□ 0.28
CCDC9-205ENST00000600117 KLHL13Q9P2N7 655 aa16.77■□□□□ 0.28
CCDC9-205ENST00000600117 TMCC3Q9ULS5 477 aa16.77■□□□□ 0.28
CCDC9-205ENST00000600117 U3KQV3 271 aa16.77■□□□□ 0.28
CCDC9-205ENST00000600117 IGKV3D-15A0A087WSY6 115 aa16.76■□□□□ 0.27
CCDC9-205ENST00000600117 GNGT2O14610 69 aa16.76■□□□□ 0.27
CCDC9-205ENST00000600117 CDC42EP2O14613 210 aa16.76■□□□□ 0.27
CCDC9-205ENST00000600117 SS18L1O75177 396 aaPredicted RBP16.76■□□□□ 0.27
CCDC9-205ENST00000600117 DEAF1O75398 565 aaPredicted RBP16.76■□□□□ 0.27
CCDC9-205ENST00000600117 IL2RAP01589 272 aa16.76■□□□□ 0.27
CCDC9-205ENST00000600117 TSPAN19P0C672 248 aa16.76■□□□□ 0.27
CCDC9-205ENST00000600117 FASP25445 335 aa16.76■□□□□ 0.27
CCDC9-205ENST00000600117 GTF2E2P29084 291 aaKnown RBP16.76■□□□□ 0.27
CCDC9-205ENST00000600117 GPR4P46093 362 aa16.76■□□□□ 0.27
CCDC9-205ENST00000600117 RASGEF1BQ0VAM2 473 aa16.76■□□□□ 0.27
CCDC9-205ENST00000600117 SLC17A1Q14916 467 aa16.76■□□□□ 0.27
CCDC9-205ENST00000600117 LAPTM4AQ15012 233 aa16.76■□□□□ 0.27
CCDC9-205ENST00000600117 HMBOX1Q6NT76 420 aa16.76■□□□□ 0.27
CCDC9-205ENST00000600117 PGBD2Q6P3X8 592 aa16.76■□□□□ 0.27
CCDC9-205ENST00000600117 RRM2BQ7LG56 351 aa16.76■□□□□ 0.27
CCDC9-205ENST00000600117 C10orf67Q8IYJ2 551 aa16.76■□□□□ 0.27
CCDC9-205ENST00000600117 LRTOMTQ8WZ04 291 aa16.76■□□□□ 0.27
CCDC9-205ENST00000600117 RND1Q92730 232 aa16.76■□□□□ 0.27
CCDC9-205ENST00000600117 INTS12Q96CB8 462 aaKnown RBP16.76■□□□□ 0.27
CCDC9-205ENST00000600117 GMPPAQ96IJ6 420 aaPredicted RBP16.76■□□□□ 0.27
CCDC9-205ENST00000600117 FAM46AQ96IP4 442 aaKnown RBP16.76■□□□□ 0.27
CCDC9-205ENST00000600117 GPA33Q99795 319 aa16.76■□□□□ 0.27
CCDC9-205ENST00000600117 BCO1Q9HAY6 547 aa16.76■□□□□ 0.27
CCDC9-205ENST00000600117 GP6Q9HCN6 339 aa16.76■□□□□ 0.27
CCDC9-205ENST00000600117 S100A14Q9HCY8 104 aa16.76■□□□□ 0.27
CCDC9-205ENST00000600117 B3GAT1Q9P2W7 334 aa16.76■□□□□ 0.27
CCDC9-205ENST00000600117 CLEC4AQ9UMR7 237 aa16.76■□□□□ 0.27
CCDC9-205ENST00000600117 TMEM5Q9Y2B1 443 aa16.76■□□□□ 0.27
CCDC9-205ENST00000600117 B3GALT5Q9Y2C3 310 aa16.76■□□□□ 0.27
CCDC9-205ENST00000600117 A0A1W2PNV4 684 aa16.75■□□□□ 0.27
CCDC9-205ENST00000600117 HSPB2A8KAH6 182 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms