RNA–Protein interactions for RNA: ENST00000599589.5

ARHGEF1-218, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-218ENST00000599589 SNRNP200O75643 2136 aaKnown RBP17.72■□□□□ 0.43
ARHGEF1-218ENST00000599589 KCNJ13O60928 360 aa17.71■□□□□ 0.43
ARHGEF1-218ENST00000599589 MAPK3P27361 379 aaPredicted RBP17.71■□□□□ 0.43
ARHGEF1-218ENST00000599589 DUSP8Q13202 625 aa17.71■□□□□ 0.43
ARHGEF1-218ENST00000599589 NDUFAF6Q330K2 333 aa17.71■□□□□ 0.43
ARHGEF1-218ENST00000599589 AMZ1Q400G9 498 aa17.71■□□□□ 0.43
ARHGEF1-218ENST00000599589 FNDC3BQ53EP0 1204 aaKnown RBP17.71■□□□□ 0.43
ARHGEF1-218ENST00000599589 C7orf61Q8IZ16 206 aa17.71■□□□□ 0.43
ARHGEF1-218ENST00000599589 GRHL3Q8TE85 626 aa17.71■□□□□ 0.43
ARHGEF1-218ENST00000599589 DOK4Q8TEW6 326 aa17.71■□□□□ 0.43
ARHGEF1-218ENST00000599589 DNTTIP1Q9H147 329 aa17.71■□□□□ 0.43
ARHGEF1-218ENST00000599589 DEC1Q9P2X7 70 aa17.71■□□□□ 0.43
ARHGEF1-218ENST00000599589 A0A1B0GW55 424 aa17.71■□□□□ 0.43
ARHGEF1-218ENST00000599589 DUX4L2P0CJ85 424 aa17.71■□□□□ 0.43
ARHGEF1-218ENST00000599589 DUX4L3P0CJ86 424 aa17.71■□□□□ 0.43
ARHGEF1-218ENST00000599589 DUX4L4P0CJ87 422 aa17.71■□□□□ 0.43
ARHGEF1-218ENST00000599589 DUX4L5P0CJ88 424 aa17.71■□□□□ 0.43
ARHGEF1-218ENST00000599589 DUX4L6P0CJ89 424 aa17.71■□□□□ 0.43
ARHGEF1-218ENST00000599589 DUX4L7P0CJ90 424 aa17.71■□□□□ 0.43
ARHGEF1-218ENST00000599589 LAMP2P13473 410 aa17.71■□□□□ 0.43
ARHGEF1-218ENST00000599589 MESP2Q0VG99 397 aa17.71■□□□□ 0.43
ARHGEF1-218ENST00000599589 ARHGAP11BQ3KRB8 267 aa17.71■□□□□ 0.43
ARHGEF1-218ENST00000599589 FAM78AQ5JUQ0 283 aa17.71■□□□□ 0.43
ARHGEF1-218ENST00000599589 BOLLQ8N9W6 283 aaKnown RBP17.71■□□□□ 0.43
ARHGEF1-218ENST00000599589 TMIEQ8NEW7 156 aa17.71■□□□□ 0.43
ARHGEF1-218ENST00000599589 OR2A1Q8NGT9 310 aa17.71■□□□□ 0.43
ARHGEF1-218ENST00000599589 SLC25A28Q96A46 364 aa17.71■□□□□ 0.43
ARHGEF1-218ENST00000599589 SDF2Q99470 211 aa17.71■□□□□ 0.43
ARHGEF1-218ENST00000599589 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.71■□□□□ 0.43
ARHGEF1-218ENST00000599589 BARX1Q9HBU1 254 aaPredicted RBP17.71■□□□□ 0.43
ARHGEF1-218ENST00000599589 RASL12Q9NYN1 266 aa17.71■□□□□ 0.43
ARHGEF1-218ENST00000599589 NCDNQ9UBB6 729 aa17.71■□□□□ 0.43
ARHGEF1-218ENST00000599589 DUX4Q9UBX2 424 aa17.71■□□□□ 0.43
ARHGEF1-218ENST00000599589 ZMAT5Q9UDW3 170 aaKnown RBP17.71■□□□□ 0.43
ARHGEF1-218ENST00000599589 MLXQ9UH92 298 aa17.71■□□□□ 0.43
ARHGEF1-218ENST00000599589 PEX12O00623 359 aa17.7■□□□□ 0.42
ARHGEF1-218ENST00000599589 EGFP01133 1207 aa17.7■□□□□ 0.42
ARHGEF1-218ENST00000599589 EN2P19622 333 aaPredicted RBP17.7■□□□□ 0.42
ARHGEF1-218ENST00000599589 ITPKBP27987 946 aa17.7■□□□□ 0.42
ARHGEF1-218ENST00000599589 PLA2G7Q13093 441 aa17.7■□□□□ 0.42
ARHGEF1-218ENST00000599589 GPM6BQ13491 265 aa17.7■□□□□ 0.42
ARHGEF1-218ENST00000599589 HNRNPA1L2Q32P51 320 aaKnown RBP17.7■□□□□ 0.42
ARHGEF1-218ENST00000599589 TMEM17Q86X19 198 aa17.7■□□□□ 0.42
ARHGEF1-218ENST00000599589 GLB1L2Q8IW92 636 aa17.7■□□□□ 0.42
ARHGEF1-218ENST00000599589 OR2L5Q8NG80 312 aa17.7■□□□□ 0.42
ARHGEF1-218ENST00000599589 OR8D1Q8WZ84 308 aa17.7■□□□□ 0.42
ARHGEF1-218ENST00000599589 MIB2Q96AX9 1013 aa17.7■□□□□ 0.42
ARHGEF1-218ENST00000599589 MS4A4EQ96PG1 132 aa17.7■□□□□ 0.42
ARHGEF1-218ENST00000599589 FERD3LQ96RJ6 166 aa17.7■□□□□ 0.42
ARHGEF1-218ENST00000599589 PRSS16Q9NQE7 514 aa17.7■□□□□ 0.42
ARHGEF1-218ENST00000599589 EDDM13A0A1B0GTR0 161 aa17.7■□□□□ 0.42
ARHGEF1-218ENST00000599589 IFNGP01579 166 aa17.7■□□□□ 0.42
ARHGEF1-218ENST00000599589 ILF3Q12906 894 aaKnown RBP eCLIP17.7■□□□□ 0.423e-7■■■□□ 16
ARHGEF1-218ENST00000599589 ZNRF4Q8WWF5 429 aa17.7■□□□□ 0.42
ARHGEF1-218ENST00000599589 RGP1Q92546 391 aaPredicted RBP17.7■□□□□ 0.42
ARHGEF1-218ENST00000599589 ARRDC3Q96B67 414 aa17.7■□□□□ 0.42
ARHGEF1-218ENST00000599589 TSPAN10Q9H1Z9 355 aaPredicted RBP17.7■□□□□ 0.42
ARHGEF1-218ENST00000599589 SYNPO2LQ9H987 977 aa17.7■□□□□ 0.42
ARHGEF1-218ENST00000599589 FBXO34Q9NWN3 711 aa17.7■□□□□ 0.42
ARHGEF1-218ENST00000599589 ICAM5Q9UMF0 924 aa17.7■□□□□ 0.42
ARHGEF1-218ENST00000599589 SCN2AQ99250 2005 aa17.7■□□□□ 0.42
ARHGEF1-218ENST00000599589 UBBP0CG47 229 aa17.69■□□□□ 0.42
ARHGEF1-218ENST00000599589 UBCP0CG48 685 aaKnown RBP17.69■□□□□ 0.42
ARHGEF1-218ENST00000599589 HIST1H1CP16403 213 aaKnown RBP17.69■□□□□ 0.42
ARHGEF1-218ENST00000599589 FAUP35544 74 aaKnown RBP17.69■□□□□ 0.42
ARHGEF1-218ENST00000599589 RPS27AP62979 156 aaKnown RBP17.69■□□□□ 0.42
ARHGEF1-218ENST00000599589 UBA52P62987 128 aaKnown RBP17.69■□□□□ 0.42
ARHGEF1-218ENST00000599589 CEBPEQ15744 281 aa17.69■□□□□ 0.42
ARHGEF1-218ENST00000599589 TMEM88Q6PEY1 159 aa17.69■□□□□ 0.42
ARHGEF1-218ENST00000599589 ZNF765Q7L2R6 523 aa17.69■□□□□ 0.42
ARHGEF1-218ENST00000599589 PHYHIPQ92561 330 aa17.69■□□□□ 0.42
ARHGEF1-218ENST00000599589 ASB16Q96NS5 453 aa17.69■□□□□ 0.42
ARHGEF1-218ENST00000599589 UQCC2Q9BRT2 126 aa17.69■□□□□ 0.42
ARHGEF1-218ENST00000599589 NDRG3Q9UGV2 375 aa17.69■□□□□ 0.42
ARHGEF1-218ENST00000599589 KCNE5Q9UJ90 142 aa17.69■□□□□ 0.42
ARHGEF1-218ENST00000599589 OR5K4A6NMS3 321 aa17.69■□□□□ 0.42
ARHGEF1-218ENST00000599589 ZNF254O75437 659 aa17.69■□□□□ 0.42
ARHGEF1-218ENST00000599589 RBBP9O75884 186 aa17.69■□□□□ 0.42
ARHGEF1-218ENST00000599589 CD1AP06126 327 aa17.69■□□□□ 0.42
ARHGEF1-218ENST00000599589 THBS1P07996 1170 aa17.69■□□□□ 0.42
ARHGEF1-218ENST00000599589 CALCBP10092 127 aa17.69■□□□□ 0.42
ARHGEF1-218ENST00000599589 STARP49675 285 aa17.69■□□□□ 0.42
ARHGEF1-218ENST00000599589 NANOS3P60323 173 aaKnown RBP17.69■□□□□ 0.42
ARHGEF1-218ENST00000599589 METRNLQ641Q3 311 aa17.69■□□□□ 0.42
ARHGEF1-218ENST00000599589 ARHGAP11AQ6P4F7 1023 aa17.69■□□□□ 0.42
ARHGEF1-218ENST00000599589 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.69■□□□□ 0.42
ARHGEF1-218ENST00000599589 NSMAFQ92636 917 aa17.69■□□□□ 0.42
ARHGEF1-218ENST00000599589 SMARCD2Q92925 531 aa17.69■□□□□ 0.42
ARHGEF1-218ENST00000599589 CHST6Q9GZX3 395 aa17.69■□□□□ 0.42
ARHGEF1-218ENST00000599589 ZNF281Q9Y2X9 895 aa17.69■□□□□ 0.42
ARHGEF1-218ENST00000599589 TBC1D3KA0A087X1G2 549 aa17.68■□□□□ 0.42
ARHGEF1-218ENST00000599589 TRAV14DV4A0A0A6YYC5 116 aa17.68■□□□□ 0.42
ARHGEF1-218ENST00000599589 A0A1B0GTQ1 180 aa17.68■□□□□ 0.42
ARHGEF1-218ENST00000599589 TBC1D3BA6NDS4 549 aa17.68■□□□□ 0.42
ARHGEF1-218ENST00000599589 TBC1D3FA6NER0 549 aaPredicted RBP17.68■□□□□ 0.42
ARHGEF1-218ENST00000599589 RFPL4AA6NLU0 287 aa17.68■□□□□ 0.42
ARHGEF1-218ENST00000599589 RFPL4AL1F8VTS6 287 aa17.68■□□□□ 0.42
ARHGEF1-218ENST00000599589 LINC01387J3KSC0 135 aa17.68■□□□□ 0.42
ARHGEF1-218ENST00000599589 GPRIN2O60269 458 aa17.68■□□□□ 0.42
ARHGEF1-218ENST00000599589 EIF4E2O60573 245 aaKnown RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms