RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 SLC9A8Q9Y2E8 581 aa12.32□□□□□ -0.44
SHKBP1-218ENST00000598907 V9GYQ6 96 aa12.32□□□□□ -0.44
SHKBP1-218ENST00000598907 H3BNX3 289 aa12.31□□□□□ -0.44
SHKBP1-218ENST00000598907 FRS3O43559 492 aa12.31□□□□□ -0.44
SHKBP1-218ENST00000598907 GKN3PP0CG01 181 aa12.31□□□□□ -0.44
SHKBP1-218ENST00000598907 PPP3CBP16298 524 aa12.31□□□□□ -0.44
SHKBP1-218ENST00000598907 SUMO3P55854 103 aaPredicted RBP12.31□□□□□ -0.44
SHKBP1-218ENST00000598907 RGS8P57771 180 aaPredicted RBP12.31□□□□□ -0.44
SHKBP1-218ENST00000598907 FAM166AQ6J272 317 aa12.31□□□□□ -0.44
SHKBP1-218ENST00000598907 AAGABQ6PD74 315 aa12.31□□□□□ -0.44
SHKBP1-218ENST00000598907 TSPYL5Q86VY4 417 aaPredicted RBP12.31□□□□□ -0.44
SHKBP1-218ENST00000598907 PLCZ1Q86YW0 608 aa12.31□□□□□ -0.44
SHKBP1-218ENST00000598907 C3orf56Q8N813 242 aa12.31□□□□□ -0.44
SHKBP1-218ENST00000598907 KBTBD8Q8NFY9 601 aa12.31□□□□□ -0.44
SHKBP1-218ENST00000598907 OR2M3Q8NG83 312 aa12.31□□□□□ -0.44
SHKBP1-218ENST00000598907 OR5W2Q8NH69 310 aa12.31□□□□□ -0.44
SHKBP1-218ENST00000598907 GPR119Q8TDV5 335 aa12.31□□□□□ -0.44
SHKBP1-218ENST00000598907 ZNF524Q96C55 264 aa12.31□□□□□ -0.44
SHKBP1-218ENST00000598907 RSRC1Q96IZ7 334 aaKnown RBP12.31□□□□□ -0.44
SHKBP1-218ENST00000598907 TACO1Q9BSH4 297 aaKnown RBP12.31□□□□□ -0.44
SHKBP1-218ENST00000598907 CHID1Q9BWS9 393 aa12.31□□□□□ -0.44
SHKBP1-218ENST00000598907 NDUFAF4Q9P032 175 aa12.31□□□□□ -0.44
SHKBP1-218ENST00000598907 PPP4R1LQ9P1A2 415 aa12.31□□□□□ -0.44
SHKBP1-218ENST00000598907 TESQ9UGI8 421 aaKnown RBP12.31□□□□□ -0.44
SHKBP1-218ENST00000598907 SLC13A4Q9UKG4 626 aa12.31□□□□□ -0.44
SHKBP1-218ENST00000598907 RRP15Q9Y3B9 282 aaKnown RBP12.31□□□□□ -0.44
SHKBP1-218ENST00000598907 ENPP4Q9Y6X5 453 aa12.31□□□□□ -0.44
SHKBP1-218ENST00000598907 YLPM1P49750 1951 aaKnown RBP12.3□□□□□ -0.44
SHKBP1-218ENST00000598907 MALRD1Q5VYJ5 2156 aa12.3□□□□□ -0.44
SHKBP1-218ENST00000598907 ETV2O00321 342 aaPredicted RBP12.3□□□□□ -0.44
SHKBP1-218ENST00000598907 AP3D1O14617 1153 aa12.3□□□□□ -0.44
SHKBP1-218ENST00000598907 FKBP6O75344 327 aa12.3□□□□□ -0.44
SHKBP1-218ENST00000598907 PRSS23O95084 383 aa12.3□□□□□ -0.44
SHKBP1-218ENST00000598907 IFNW1P05000 195 aa12.3□□□□□ -0.44
SHKBP1-218ENST00000598907 FABP3P05413 133 aa12.3□□□□□ -0.44
SHKBP1-218ENST00000598907 HTR2AP28223 471 aa12.3□□□□□ -0.44
SHKBP1-218ENST00000598907 SLC6A8P48029 635 aa12.3□□□□□ -0.44
SHKBP1-218ENST00000598907 HOXC5Q00444 222 aa12.3□□□□□ -0.44
SHKBP1-218ENST00000598907 PGGHGQ32M88 737 aa12.3□□□□□ -0.44
SHKBP1-218ENST00000598907 OR5M10Q6IEU7 315 aa12.3□□□□□ -0.44
SHKBP1-218ENST00000598907 PPP4R4Q6NUP7 873 aa12.3□□□□□ -0.44
SHKBP1-218ENST00000598907 ADAM5Q6NVV9 412 aa12.3□□□□□ -0.44
SHKBP1-218ENST00000598907 ZFP1Q6P2D0 407 aa12.3□□□□□ -0.44
SHKBP1-218ENST00000598907 ZDHHC21Q8IVQ6 265 aa12.3□□□□□ -0.44
SHKBP1-218ENST00000598907 ZNF525Q8N782 197 aa12.3□□□□□ -0.44
SHKBP1-218ENST00000598907 LSMEM1Q8N8F7 131 aa12.3□□□□□ -0.44
SHKBP1-218ENST00000598907 OR10H5Q8NGA6 315 aa12.3□□□□□ -0.44
SHKBP1-218ENST00000598907 VANGL1Q8TAA9 524 aaPredicted RBP12.3□□□□□ -0.44
SHKBP1-218ENST00000598907 PYDC1Q8WXC3 89 aa12.3□□□□□ -0.44
SHKBP1-218ENST00000598907 SH3YL1Q96HL8 342 aaPredicted RBP12.3□□□□□ -0.44
SHKBP1-218ENST00000598907 ZNF300Q96RE9 604 aaPredicted RBP12.3□□□□□ -0.44
SHKBP1-218ENST00000598907 MCHR1Q99705 422 aa12.3□□□□□ -0.44
SHKBP1-218ENST00000598907 TRAF4Q9BUZ4 470 aaPredicted RBP12.3□□□□□ -0.44
SHKBP1-218ENST00000598907 PRR14Q9BWN1 585 aa12.3□□□□□ -0.44
SHKBP1-218ENST00000598907 POLR2J2Q9GZM3 115 aaKnown RBP12.3□□□□□ -0.44
SHKBP1-218ENST00000598907 POLR2J3Q9H1A7 115 aaKnown RBP12.3□□□□□ -0.44
SHKBP1-218ENST00000598907 DSN1Q9H410 356 aa12.3□□□□□ -0.44
SHKBP1-218ENST00000598907 S100A14Q9HCY8 104 aa12.3□□□□□ -0.44
SHKBP1-218ENST00000598907 MED11Q9P086 117 aa12.3□□□□□ -0.44
SHKBP1-218ENST00000598907 A4GNTQ9UNA3 340 aa12.3□□□□□ -0.44
SHKBP1-218ENST00000598907 AURKCQ9UQB9 309 aa12.3□□□□□ -0.44
SHKBP1-218ENST00000598907 AP4S1Q9Y587 144 aa12.3□□□□□ -0.44
SHKBP1-218ENST00000598907 LOC100289279A0A1B0GTE1 492 aa12.29□□□□□ -0.44
SHKBP1-218ENST00000598907 hCG_2039718K7EN88 272 aa12.29□□□□□ -0.44
SHKBP1-218ENST00000598907 FFAR1O14842 300 aa12.29□□□□□ -0.44
SHKBP1-218ENST00000598907 SEC14L5O43304 696 aa12.29□□□□□ -0.44
SHKBP1-218ENST00000598907 CBR3O75828 277 aa12.29□□□□□ -0.44
SHKBP1-218ENST00000598907 CYP7B1O75881 506 aa12.29□□□□□ -0.44
SHKBP1-218ENST00000598907 CD3EP07766 207 aa12.29□□□□□ -0.44
SHKBP1-218ENST00000598907 LINGO3P0C6S8 592 aa12.29□□□□□ -0.44
SHKBP1-218ENST00000598907 RHCEP18577 417 aa12.29□□□□□ -0.44
SHKBP1-218ENST00000598907 ACTG1P63261 375 aa12.29□□□□□ -0.44
SHKBP1-218ENST00000598907 CBFBQ13951 182 aa12.29□□□□□ -0.44
SHKBP1-218ENST00000598907 STAC2Q6ZMT1 411 aa12.29□□□□□ -0.44
SHKBP1-218ENST00000598907 ATG4DQ86TL0 474 aaPredicted RBP12.29□□□□□ -0.44
SHKBP1-218ENST00000598907 RANBP3LQ86VV4 465 aaPredicted RBP12.29□□□□□ -0.44
SHKBP1-218ENST00000598907 RFLNBQ8N5W9 214 aa12.29□□□□□ -0.44
SHKBP1-218ENST00000598907 FNDC9Q8TBE3 224 aa12.29□□□□□ -0.44
SHKBP1-218ENST00000598907 TRIM2Q9C040 744 aa12.29□□□□□ -0.44
SHKBP1-218ENST00000598907 DKKL1Q9UK85 242 aa12.29□□□□□ -0.44
SHKBP1-218ENST00000598907 FBXL2Q9UKC9 423 aa12.29□□□□□ -0.44
SHKBP1-218ENST00000598907 MRPS18CQ9Y3D5 142 aaKnown RBP12.29□□□□□ -0.44
SHKBP1-218ENST00000598907 PRR14LQ5THK1 2151 aa12.28□□□□□ -0.44
SHKBP1-218ENST00000598907 H0YC42 278 aa12.28□□□□□ -0.44
SHKBP1-218ENST00000598907 J3KTA2 159 aa12.28□□□□□ -0.44
SHKBP1-218ENST00000598907 KRT36O76013 467 aa12.28□□□□□ -0.44
SHKBP1-218ENST00000598907 LYPD3O95274 346 aa12.28□□□□□ -0.44
SHKBP1-218ENST00000598907 THY1P04216 161 aa12.28□□□□□ -0.44
SHKBP1-218ENST00000598907 SLC25A16P16260 332 aa12.28□□□□□ -0.44
SHKBP1-218ENST00000598907 PGCP20142 388 aa12.28□□□□□ -0.44
SHKBP1-218ENST00000598907 TPD52P55327 224 aaPredicted RBP12.28□□□□□ -0.44
SHKBP1-218ENST00000598907 OR1Q1Q15612 314 aa12.28□□□□□ -0.44
SHKBP1-218ENST00000598907 TOMM34Q15785 309 aaPredicted RBP12.28□□□□□ -0.44
SHKBP1-218ENST00000598907 ZNF672Q499Z4 452 aaPredicted RBP12.28□□□□□ -0.44
SHKBP1-218ENST00000598907 SLC25A53Q5H9E4 307 aa12.28□□□□□ -0.44
SHKBP1-218ENST00000598907 ENTPD8Q5MY95 495 aa12.28□□□□□ -0.44
SHKBP1-218ENST00000598907 DEF8Q6ZN54 512 aa12.28□□□□□ -0.44
SHKBP1-218ENST00000598907 C1GALT1C1Q96EU7 318 aa12.28□□□□□ -0.44
SHKBP1-218ENST00000598907 DHRS1Q96LJ7 313 aa12.28□□□□□ -0.44
SHKBP1-218ENST00000598907 PRRC1Q96M27 445 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms