RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 ADPRHL1Q8NDY3 354 aa12.22□□□□□ -0.45
UPF1-205ENST00000598209 USB1Q9BQ65 265 aaKnown RBP12.22□□□□□ -0.45
UPF1-205ENST00000598209 ZNF426Q9BUY5 554 aa12.22□□□□□ -0.45
UPF1-205ENST00000598209 SLCO5A1Q9H2Y9 848 aa12.22□□□□□ -0.45
UPF1-205ENST00000598209 MRPL39Q9NYK5 338 aaKnown RBP12.22□□□□□ -0.45
UPF1-205ENST00000598209 TAS2R16Q9NYV7 291 aa12.22□□□□□ -0.45
UPF1-205ENST00000598209 B3GAT1Q9P2W7 334 aa12.22□□□□□ -0.45
UPF1-205ENST00000598209 EGFL7Q9UHF1 273 aa12.22□□□□□ -0.45
UPF1-205ENST00000598209 RIMS3Q9UJD0 308 aa12.22□□□□□ -0.45
UPF1-205ENST00000598209 LRBAP50851 2863 aa12.22□□□□□ -0.45
UPF1-205ENST00000598209 HRNRQ86YZ3 2850 aaPredicted RBP12.22□□□□□ -0.45
UPF1-205ENST00000598209 ALPK2Q86TB3 2170 aa12.21□□□□□ -0.45
UPF1-205ENST00000598209 CSMD2Q7Z408 3487 aa12.21□□□□□ -0.45
UPF1-205ENST00000598209 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.21□□□□□ -0.45
UPF1-205ENST00000598209 A0A1W2PPR1 153 aa12.21□□□□□ -0.45
UPF1-205ENST00000598209 CIB4A0PJX0 185 aa12.21□□□□□ -0.45
UPF1-205ENST00000598209 MS4A18H0YCH9 400 aa12.21□□□□□ -0.45
UPF1-205ENST00000598209 KPNA4O00629 521 aaPredicted RBP12.21□□□□□ -0.45
UPF1-205ENST00000598209 KLF4O43474 513 aa12.21□□□□□ -0.45
UPF1-205ENST00000598209 RAD51DO75771 328 aa12.21□□□□□ -0.45
UPF1-205ENST00000598209 MT-ATP6P00846 226 aa12.21□□□□□ -0.45
UPF1-205ENST00000598209 IFNW1P05000 195 aa12.21□□□□□ -0.45
UPF1-205ENST00000598209 ITGA5P08648 1049 aa12.21□□□□□ -0.45
UPF1-205ENST00000598209 LOXP28300 417 aaPredicted RBP12.21□□□□□ -0.45
UPF1-205ENST00000598209 DNAJA1P31689 397 aaKnown RBP12.21□□□□□ -0.45
UPF1-205ENST00000598209 SELENOPP49908 381 aa12.21□□□□□ -0.45
UPF1-205ENST00000598209 CLDN17P56750 224 aa12.21□□□□□ -0.45
UPF1-205ENST00000598209 MXRA7P84157 204 aa12.21□□□□□ -0.45
UPF1-205ENST00000598209 PMS2P3Q13401 168 aa12.21□□□□□ -0.45
UPF1-205ENST00000598209 C1DQ13901 141 aaKnown RBP12.21□□□□□ -0.45
UPF1-205ENST00000598209 TAB1Q15750 504 aa12.21□□□□□ -0.45
UPF1-205ENST00000598209 STK11Q15831 433 aa12.21□□□□□ -0.45
UPF1-205ENST00000598209 MS4A18Q3C1V0 323 aa12.21□□□□□ -0.45
UPF1-205ENST00000598209 IFI44LQ53G44 452 aa12.21□□□□□ -0.45
UPF1-205ENST00000598209 BEX5Q5H9J7 111 aa12.21□□□□□ -0.45
UPF1-205ENST00000598209 GLYATQ6IB77 296 aa12.21□□□□□ -0.45
UPF1-205ENST00000598209 NIPAL3Q6P499 406 aa12.21□□□□□ -0.45
UPF1-205ENST00000598209 C16orf89Q6UX73 402 aa12.21□□□□□ -0.45
UPF1-205ENST00000598209 FKBP9P1Q75LS8 142 aa12.21□□□□□ -0.45
UPF1-205ENST00000598209 NKAIN4Q8IVV8 208 aa12.21□□□□□ -0.45
UPF1-205ENST00000598209 POMGNT2Q8NAT1 580 aa12.21□□□□□ -0.45
UPF1-205ENST00000598209 GEMIN6Q8WXD5 167 aaKnown RBP12.21□□□□□ -0.45
UPF1-205ENST00000598209 HSD17B8Q92506 261 aa12.21□□□□□ -0.45
UPF1-205ENST00000598209 HSH2DQ96JZ2 352 aa12.21□□□□□ -0.45
UPF1-205ENST00000598209 PRRC1Q96M27 445 aa12.21□□□□□ -0.45
UPF1-205ENST00000598209 SLC19A3Q9BZV2 496 aa12.21□□□□□ -0.45
UPF1-205ENST00000598209 AMBRA1Q9C0C7 1298 aa12.21□□□□□ -0.45
UPF1-205ENST00000598209 LIME1Q9H400 295 aa12.21□□□□□ -0.45
UPF1-205ENST00000598209 PLEKHF2Q9H8W4 249 aa12.21□□□□□ -0.45
UPF1-205ENST00000598209 NDE1Q9NXR1 346 aa12.21□□□□□ -0.45
UPF1-205ENST00000598209 TACC2O95359 2948 aa12.21□□□□□ -0.46
UPF1-205ENST00000598209 RAI1Q7Z5J4 1906 aaPredicted RBP12.2□□□□□ -0.46
UPF1-205ENST00000598209 LOC102725191A0A1B0GVB3 256 aa12.2□□□□□ -0.46
UPF1-205ENST00000598209 PDLIM1O00151 329 aa12.2□□□□□ -0.46
UPF1-205ENST00000598209 GMNNO75496 209 aa12.2□□□□□ -0.46
UPF1-205ENST00000598209 CH25HO95992 272 aa12.2□□□□□ -0.46
UPF1-205ENST00000598209 HPRP00739 348 aa12.2□□□□□ -0.46
UPF1-205ENST00000598209 THRBP10828 461 aa12.2□□□□□ -0.46
UPF1-205ENST00000598209 HSD17B1P14061 328 aa12.2□□□□□ -0.46
UPF1-205ENST00000598209 TCN1P20061 433 aaPredicted RBP12.2□□□□□ -0.46
UPF1-205ENST00000598209 RBM34P42696 430 aaKnown RBP12.2□□□□□ -0.46
UPF1-205ENST00000598209 YAP1P46937 504 aaKnown RBP12.2□□□□□ -0.46
UPF1-205ENST00000598209 MNAT1P51948 309 aa12.2□□□□□ -0.46
UPF1-205ENST00000598209 UGT2B15P54855 530 aa12.2□□□□□ -0.46
UPF1-205ENST00000598209 FOXD4Q12950 439 aaPredicted RBP12.2□□□□□ -0.46
UPF1-205ENST00000598209 ZNF74Q16587 644 aa12.2□□□□□ -0.46
UPF1-205ENST00000598209 SAMD4BQ5PRF9 694 aaKnown RBP12.2□□□□□ -0.46
UPF1-205ENST00000598209 TIMM23BQ5SRD1 257 aa12.2□□□□□ -0.46
UPF1-205ENST00000598209 C9orf135Q5VTT2 229 aa12.2□□□□□ -0.46
UPF1-205ENST00000598209 UEVLDQ8IX04 471 aa12.2□□□□□ -0.46
UPF1-205ENST00000598209 DEFB107AQ8IZN7 70 aa12.2□□□□□ -0.46
UPF1-205ENST00000598209 FAM156AQ8NDB6 213 aa12.2□□□□□ -0.46
UPF1-205ENST00000598209 OR5J2Q8NH18 312 aa12.2□□□□□ -0.46
UPF1-205ENST00000598209 TMEM255BQ8WV15 326 aa12.2□□□□□ -0.46
UPF1-205ENST00000598209 NSL1Q96IY1 281 aa12.2□□□□□ -0.46
UPF1-205ENST00000598209 HS3ST6Q96QI5 342 aa12.2□□□□□ -0.46
UPF1-205ENST00000598209 CDRT15Q96T59 188 aa12.2□□□□□ -0.46
UPF1-205ENST00000598209 FKRPQ9H9S5 495 aa12.2□□□□□ -0.46
UPF1-205ENST00000598209 MEPEQ9NQ76 525 aaPredicted RBP12.2□□□□□ -0.46
UPF1-205ENST00000598209 NANSQ9NR45 359 aa12.2□□□□□ -0.46
UPF1-205ENST00000598209 RPS6KA6Q9UK32 745 aa12.2□□□□□ -0.46
UPF1-205ENST00000598209 A4GNTQ9UNA3 340 aa12.2□□□□□ -0.46
UPF1-205ENST00000598209 RCE1Q9Y256 329 aa12.2□□□□□ -0.46
UPF1-205ENST00000598209 SNX13Q9Y5W8 968 aa12.2□□□□□ -0.46
UPF1-205ENST00000598209 HEATR1Q9H583 2144 aaKnown RBP12.19□□□□□ -0.46
UPF1-205ENST00000598209 OR5H1A6NKK0 313 aa12.19□□□□□ -0.46
UPF1-205ENST00000598209 ENO4A6NNW6 628 aa12.19□□□□□ -0.46
UPF1-205ENST00000598209 J3KTA2 159 aa12.19□□□□□ -0.46
UPF1-205ENST00000598209 PLPP3O14495 311 aa12.19□□□□□ -0.46
UPF1-205ENST00000598209 TRAF3IP2O43734 574 aaPredicted RBP12.19□□□□□ -0.46
UPF1-205ENST00000598209 KRT33AO76009 404 aa12.19□□□□□ -0.46
UPF1-205ENST00000598209 ZNF432O94892 652 aa12.19□□□□□ -0.46
UPF1-205ENST00000598209 HLA-DOBP13765 273 aa12.19□□□□□ -0.46
UPF1-205ENST00000598209 MPGP29372 298 aa12.19□□□□□ -0.46
UPF1-205ENST00000598209 IFNA8P32881 189 aa12.19□□□□□ -0.46
UPF1-205ENST00000598209 LGALS3BPQ08380 585 aa12.19□□□□□ -0.46
UPF1-205ENST00000598209 PUDPQ08623 228 aa12.19□□□□□ -0.46
UPF1-205ENST00000598209 ST3GAL3Q11203 375 aa12.19□□□□□ -0.46
UPF1-205ENST00000598209 PPA1Q15181 289 aa12.19□□□□□ -0.46
UPF1-205ENST00000598209 GABRA6Q16445 453 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms