RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 VLDLRP98155 873 aa17.43■□□□□ 0.38
SHKBP1-214ENST00000597396 MS4A2Q01362 244 aa17.43■□□□□ 0.38
SHKBP1-214ENST00000597396 C1DQ13901 141 aaKnown RBP17.43■□□□□ 0.38
SHKBP1-214ENST00000597396 POU4F3Q15319 338 aa17.43■□□□□ 0.38
SHKBP1-214ENST00000597396 ZNF74Q16587 644 aa17.43■□□□□ 0.38
SHKBP1-214ENST00000597396 OR5J2Q8NH18 312 aa17.43■□□□□ 0.38
SHKBP1-214ENST00000597396 PFN4Q8NHR9 129 aa17.43■□□□□ 0.38
SHKBP1-214ENST00000597396 MARVELD3Q96A59 401 aa17.43■□□□□ 0.38
SHKBP1-214ENST00000597396 C7orf34Q96L11 122 aa17.43■□□□□ 0.38
SHKBP1-214ENST00000597396 OXGR1Q96P68 337 aa17.43■□□□□ 0.38
SHKBP1-214ENST00000597396 TRIM15Q9C019 465 aa17.43■□□□□ 0.38
SHKBP1-214ENST00000597396 FKRPQ9H9S5 495 aa17.43■□□□□ 0.38
SHKBP1-214ENST00000597396 MEPEQ9NQ76 525 aaPredicted RBP17.43■□□□□ 0.38
SHKBP1-214ENST00000597396 MRPL39Q9NYK5 338 aaKnown RBP17.43■□□□□ 0.38
SHKBP1-214ENST00000597396 NDUFAF4Q9P032 175 aa17.43■□□□□ 0.38
SHKBP1-214ENST00000597396 PRSS50Q9UI38 385 aa17.43■□□□□ 0.38
SHKBP1-214ENST00000597396 TUBAL3A6NHL2 446 aa17.42■□□□□ 0.38
SHKBP1-214ENST00000597396 DIRAS1O95057 198 aa17.42■□□□□ 0.38
SHKBP1-214ENST00000597396 PRSS23O95084 383 aa17.42■□□□□ 0.38
SHKBP1-214ENST00000597396 OR6A2O95222 327 aa17.42■□□□□ 0.38
SHKBP1-214ENST00000597396 HIST1H2ABP04908 130 aa17.42■□□□□ 0.38
SHKBP1-214ENST00000597396 FABP3P05413 133 aa17.42■□□□□ 0.38
SHKBP1-214ENST00000597396 H1F0P07305 194 aaKnown RBP17.42■□□□□ 0.38
SHKBP1-214ENST00000597396 CREB3L2Q70SY1 520 aa17.42■□□□□ 0.38
SHKBP1-214ENST00000597396 HIST3H2AQ7L7L0 130 aa17.42■□□□□ 0.38
SHKBP1-214ENST00000597396 AAED1Q7RTV5 226 aa17.42■□□□□ 0.38
SHKBP1-214ENST00000597396 TSEN54Q7Z6J9 526 aaKnown RBP17.42■□□□□ 0.38
SHKBP1-214ENST00000597396 UBE2J2Q8N2K1 259 aa17.42■□□□□ 0.38
SHKBP1-214ENST00000597396 PIK3C3Q8NEB9 887 aa17.42■□□□□ 0.38
SHKBP1-214ENST00000597396 HIST1H2ACQ93077 130 aa17.42■□□□□ 0.38
SHKBP1-214ENST00000597396 TMEM45BQ96B21 275 aa17.42■□□□□ 0.38
SHKBP1-214ENST00000597396 SGTBQ96EQ0 304 aa17.42■□□□□ 0.38
SHKBP1-214ENST00000597396 ZNF385AQ96PM9 386 aaKnown RBP17.42■□□□□ 0.38
SHKBP1-214ENST00000597396 SEPHS2Q99611 448 aa17.42■□□□□ 0.38
SHKBP1-214ENST00000597396 NMNAT1Q9HAN9 279 aaPredicted RBP17.42■□□□□ 0.38
SHKBP1-214ENST00000597396 MAN2C1Q9NTJ4 1040 aa17.42■□□□□ 0.38
SHKBP1-214ENST00000597396 ANKHD1Q8IWZ3 2542 aaKnown RBP17.42■□□□□ 0.38
SHKBP1-214ENST00000597396 C16orf97H3BN30 126 aa17.41■□□□□ 0.38
SHKBP1-214ENST00000597396 PIP5K1CO60331 668 aa17.41■□□□□ 0.38
SHKBP1-214ENST00000597396 SEMG1P04279 462 aa17.41■□□□□ 0.38
SHKBP1-214ENST00000597396 ADORA3P0DMS8 318 aa17.41■□□□□ 0.38
SHKBP1-214ENST00000597396 EDNRAP25101 427 aa17.41■□□□□ 0.38
SHKBP1-214ENST00000597396 PCYT1AP49585 367 aa17.41■□□□□ 0.38
SHKBP1-214ENST00000597396 TRAP1Q12931 704 aaKnown RBP17.41■□□□□ 0.38
SHKBP1-214ENST00000597396 FGD3Q5JSP0 725 aa17.41■□□□□ 0.38
SHKBP1-214ENST00000597396 ZNF730Q6ZMV8 503 aa17.41■□□□□ 0.38
SHKBP1-214ENST00000597396 RRM2BQ7LG56 351 aa17.41■□□□□ 0.38
SHKBP1-214ENST00000597396 NANOGNBQ7Z5D8 188 aa17.41■□□□□ 0.38
SHKBP1-214ENST00000597396 ZDHHC21Q8IVQ6 265 aa17.41■□□□□ 0.38
SHKBP1-214ENST00000597396 UEVLDQ8IX04 471 aa17.41■□□□□ 0.38
SHKBP1-214ENST00000597396 ACOT11Q8WXI4 607 aaPredicted RBP17.41■□□□□ 0.38
SHKBP1-214ENST00000597396 PIP5K1AQ99755 562 aa17.41■□□□□ 0.38
SHKBP1-214ENST00000597396 ANKRD19PQ9H560 264 aa17.41■□□□□ 0.38
SHKBP1-214ENST00000597396 NDRG3Q9UGV2 375 aa17.41■□□□□ 0.38
SHKBP1-214ENST00000597396 ZNF229Q9UJW7 825 aa17.41■□□□□ 0.38
SHKBP1-214ENST00000597396 TCRBV5S2A0A599 114 aa17.4■□□□□ 0.38
SHKBP1-214ENST00000597396 MS4A18H0YCH9 400 aa17.4■□□□□ 0.38
SHKBP1-214ENST00000597396 PLPP3O14495 311 aa17.4■□□□□ 0.38
SHKBP1-214ENST00000597396 GSC2O15499 205 aa17.4■□□□□ 0.38
SHKBP1-214ENST00000597396 AKAP8O43823 692 aaKnown RBP17.4■□□□□ 0.38
SHKBP1-214ENST00000597396 OR7A10O76100 309 aa17.4■□□□□ 0.38
SHKBP1-214ENST00000597396 IGF2P01344 180 aa17.4■□□□□ 0.38
SHKBP1-214ENST00000597396 IGHV3-9P01782 118 aa17.4■□□□□ 0.38
SHKBP1-214ENST00000597396 IFI30P13284 250 aa17.4■□□□□ 0.38
SHKBP1-214ENST00000597396 FUT4P22083 530 aa17.4■□□□□ 0.38
SHKBP1-214ENST00000597396 AHCYP23526 432 aa17.4■□□□□ 0.38
SHKBP1-214ENST00000597396 NTF4P34130 210 aa17.4■□□□□ 0.38
SHKBP1-214ENST00000597396 UGT2B10P36537 528 aa17.4■□□□□ 0.38
SHKBP1-214ENST00000597396 CLDN17P56750 224 aa17.4■□□□□ 0.38
SHKBP1-214ENST00000597396 SPIBQ01892 262 aa17.4■□□□□ 0.38
SHKBP1-214ENST00000597396 PUDPQ08623 228 aa17.4■□□□□ 0.38
SHKBP1-214ENST00000597396 MS4A18Q3C1V0 323 aa17.4■□□□□ 0.38
SHKBP1-214ENST00000597396 PGM2L1Q6PCE3 622 aa17.4■□□□□ 0.38
SHKBP1-214ENST00000597396 Q6ZT83 130 aa17.4■□□□□ 0.38
SHKBP1-214ENST00000597396 SLC46A3Q7Z3Q1 461 aa17.4■□□□□ 0.38
SHKBP1-214ENST00000597396 CXorf67Q86X51 503 aaPredicted RBP17.4■□□□□ 0.38
SHKBP1-214ENST00000597396 EPHX4Q8IUS5 362 aa17.4■□□□□ 0.38
SHKBP1-214ENST00000597396 NRMQ8IXM6 262 aa17.4■□□□□ 0.38
SHKBP1-214ENST00000597396 LRRC17Q8N6Y2 441 aa17.4■□□□□ 0.38
SHKBP1-214ENST00000597396 ZIC4Q8N9L1 334 aa17.4■□□□□ 0.38
SHKBP1-214ENST00000597396 LINC01560Q8TB33 94 aa17.4■□□□□ 0.38
SHKBP1-214ENST00000597396 POP5Q969H6 163 aaKnown RBP17.4■□□□□ 0.38
SHKBP1-214ENST00000597396 CADM1Q9BY67 442 aaKnown RBP17.4■□□□□ 0.38
SHKBP1-214ENST00000597396 C20orf141Q9NUB4 165 aa17.4■□□□□ 0.38
SHKBP1-214ENST00000597396 B3GAT1Q9P2W7 334 aa17.4■□□□□ 0.38
SHKBP1-214ENST00000597396 UPB1Q9UBR1 384 aa17.4■□□□□ 0.38
SHKBP1-214ENST00000597396 TESMINQ9Y4I5 508 aa17.4■□□□□ 0.38
SHKBP1-214ENST00000597396 CELSR2Q9HCU4 2923 aa17.4■□□□□ 0.38
SHKBP1-214ENST00000597396 ADGRG4Q8IZF6 3080 aa17.39■□□□□ 0.38
SHKBP1-214ENST00000597396 LOC102725191A0A1B0GVB3 256 aa17.39■□□□□ 0.37
SHKBP1-214ENST00000597396 HTR3EA5X5Y0 456 aa17.39■□□□□ 0.37
SHKBP1-214ENST00000597396 C11orf98E9PRG8 122 aa17.39■□□□□ 0.37
SHKBP1-214ENST00000597396 SERPINI2O75830 405 aa17.39■□□□□ 0.37
SHKBP1-214ENST00000597396 CNOT4O95628 575 aaKnown RBP17.39■□□□□ 0.37
SHKBP1-214ENST00000597396 HPRP00739 348 aa17.39■□□□□ 0.37
SHKBP1-214ENST00000597396 ADAP00813 363 aa17.39■□□□□ 0.37
SHKBP1-214ENST00000597396 FUT1P19526 365 aa17.39■□□□□ 0.37
SHKBP1-214ENST00000597396 SMIM11AP58511 58 aa17.39■□□□□ 0.37
SHKBP1-214ENST00000597396 POU3F1Q03052 451 aaPredicted RBP17.39■□□□□ 0.37
SHKBP1-214ENST00000597396 CHRNB3Q05901 458 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms