RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 GPAT4Q86UL3 456 aa12.78□□□□□ -0.36
VRK3-213ENST00000597215 LIX1LQ8IVB5 337 aa12.78□□□□□ -0.36
VRK3-213ENST00000597215 RELL2Q8NC24 303 aaPredicted RBP12.78□□□□□ -0.36
VRK3-213ENST00000597215 OR9K2Q8NGE7 335 aa12.78□□□□□ -0.36
VRK3-213ENST00000597215 LIPHQ8WWY8 451 aa12.78□□□□□ -0.36
VRK3-213ENST00000597215 ALPK1Q96QP1 1244 aa12.78□□□□□ -0.36
VRK3-213ENST00000597215 FUZQ9BT04 418 aa12.78□□□□□ -0.36
VRK3-213ENST00000597215 REEP1Q9H902 201 aa12.78□□□□□ -0.36
VRK3-213ENST00000597215 SEC14L4Q9UDX3 406 aa12.78□□□□□ -0.36
VRK3-213ENST00000597215 TMEM5Q9Y2B1 443 aa12.78□□□□□ -0.36
VRK3-213ENST00000597215 LYVE1Q9Y5Y7 322 aa12.78□□□□□ -0.36
VRK3-213ENST00000597215 USP9XQ93008 2570 aaPredicted RBP12.78□□□□□ -0.36
VRK3-213ENST00000597215 SH3PXD2BA1X283 911 aa12.77□□□□□ -0.37
VRK3-213ENST00000597215 EEF1E1-BLOC1S5C9J1V9 151 aa12.77□□□□□ -0.37
VRK3-213ENST00000597215 EEF1E1O43324 174 aaKnown RBP12.77□□□□□ -0.37
VRK3-213ENST00000597215 SMNDC1O75940 238 aaKnown RBP eCLIP12.77□□□□□ -0.37
VRK3-213ENST00000597215 OR6A2O95222 327 aa12.77□□□□□ -0.37
VRK3-213ENST00000597215 FUT1P19526 365 aa12.77□□□□□ -0.37
VRK3-213ENST00000597215 HMGA2P52926 109 aa12.77□□□□□ -0.37
VRK3-213ENST00000597215 ACTR3P61158 418 aa12.77□□□□□ -0.37
VRK3-213ENST00000597215 LSM11P83369 360 aaKnown RBP eCLIP12.77□□□□□ -0.37
VRK3-213ENST00000597215 IL1RL1Q01638 556 aa12.77□□□□□ -0.37
VRK3-213ENST00000597215 PUDPQ08623 228 aa12.77□□□□□ -0.37
VRK3-213ENST00000597215 GK3PQ14409 553 aa12.77□□□□□ -0.37
VRK3-213ENST00000597215 KPNB1Q14974 876 aaKnown RBP12.77□□□□□ -0.37
VRK3-213ENST00000597215 SEC23BQ15437 767 aa12.77□□□□□ -0.37
VRK3-213ENST00000597215 NANOGNBQ7Z5D8 188 aa12.77□□□□□ -0.37
VRK3-213ENST00000597215 BTLAQ7Z6A9 289 aa12.77□□□□□ -0.37
VRK3-213ENST00000597215 GALNT5Q7Z7M9 940 aa12.77□□□□□ -0.37
VRK3-213ENST00000597215 OR4K5Q8NGD3 323 aa12.77□□□□□ -0.37
VRK3-213ENST00000597215 SLCO4A1Q96BD0 722 aa12.77□□□□□ -0.37
VRK3-213ENST00000597215 STARD4Q96DR4 205 aa12.77□□□□□ -0.37
VRK3-213ENST00000597215 DUS3LQ96G46 650 aaKnown RBP12.77□□□□□ -0.37
VRK3-213ENST00000597215 OXGR1Q96P68 337 aa12.77□□□□□ -0.37
VRK3-213ENST00000597215 KCNJ16Q9NPI9 418 aa12.77□□□□□ -0.37
VRK3-213ENST00000597215 PROCRQ9UNN8 238 aa12.77□□□□□ -0.37
VRK3-213ENST00000597215 NOSIPQ9Y314 301 aaKnown RBP12.77□□□□□ -0.37
VRK3-213ENST00000597215 SAMHD1Q9Y3Z3 626 aaKnown RBP12.77□□□□□ -0.37
VRK3-213ENST00000597215 FLVCR1Q9Y5Y0 555 aa12.77□□□□□ -0.37
VRK3-213ENST00000597215 TENM4Q6N022 2769 aa12.77□□□□□ -0.37
VRK3-213ENST00000597215 CACNA1CQ13936 2221 aa12.77□□□□□ -0.37
VRK3-213ENST00000597215 SPTBN1Q01082 2364 aaKnown RBP12.77□□□□□ -0.37
VRK3-213ENST00000597215 DOPEY1Q5JWR5 2465 aa12.77□□□□□ -0.37
VRK3-213ENST00000597215 SETXQ7Z333 2677 aaKnown RBP12.76□□□□□ -0.37
VRK3-213ENST00000597215 LOC102725191A0A1B0GVB3 256 aa12.76□□□□□ -0.37
VRK3-213ENST00000597215 EFCAB9A8MZ26 197 aa12.76□□□□□ -0.37
VRK3-213ENST00000597215 PLPP3O14495 311 aa12.76□□□□□ -0.37
VRK3-213ENST00000597215 GNGT2O14610 69 aa12.76□□□□□ -0.37
VRK3-213ENST00000597215 MSTNO14793 375 aa12.76□□□□□ -0.37
VRK3-213ENST00000597215 ADORA3P0DMS8 318 aa12.76□□□□□ -0.37
VRK3-213ENST00000597215 SAGP10523 405 aaPredicted RBP12.76□□□□□ -0.37
VRK3-213ENST00000597215 CD8BP10966 210 aa12.76□□□□□ -0.37
VRK3-213ENST00000597215 ZNF43P17038 809 aa12.76□□□□□ -0.37
VRK3-213ENST00000597215 MAKP20794 623 aa12.76□□□□□ -0.37
VRK3-213ENST00000597215 IFNGR2P38484 337 aa12.76□□□□□ -0.37
VRK3-213ENST00000597215 GPR4P46093 362 aa12.76□□□□□ -0.37
VRK3-213ENST00000597215 LIMS1P48059 325 aa12.76□□□□□ -0.37
VRK3-213ENST00000597215 C1DQ13901 141 aaKnown RBP12.76□□□□□ -0.37
VRK3-213ENST00000597215 CDSNQ15517 529 aa12.76□□□□□ -0.37
VRK3-213ENST00000597215 EXOC3L2Q2M3D2 409 aa12.76□□□□□ -0.37
VRK3-213ENST00000597215 NUFIP2Q7Z417 695 aaKnown RBP12.76□□□□□ -0.37
VRK3-213ENST00000597215 C10orf67Q8IYJ2 551 aa12.76□□□□□ -0.37
VRK3-213ENST00000597215 LINC00471Q8N535 108 aa12.76□□□□□ -0.37
VRK3-213ENST00000597215 LRRC17Q8N6Y2 441 aa12.76□□□□□ -0.37
VRK3-213ENST00000597215 ZNF775Q96BV0 537 aaPredicted RBP12.76□□□□□ -0.37
VRK3-213ENST00000597215 LRRC46Q96FV0 321 aa12.76□□□□□ -0.37
VRK3-213ENST00000597215 UCK2Q9BZX2 261 aa12.76□□□□□ -0.37
VRK3-213ENST00000597215 C12orf49Q9H741 205 aa12.76□□□□□ -0.37
VRK3-213ENST00000597215 ARMC1Q9NVT9 282 aa12.76□□□□□ -0.37
VRK3-213ENST00000597215 B3GAT1Q9P2W7 334 aa12.76□□□□□ -0.37
VRK3-213ENST00000597215 DNAJB9Q9UBS3 223 aa12.76□□□□□ -0.37
VRK3-213ENST00000597215 MS4A18H0YCH9 400 aa12.75□□□□□ -0.37
VRK3-213ENST00000597215 OR10H3O60404 316 aa12.75□□□□□ -0.37
VRK3-213ENST00000597215 MRPL33O75394 65 aaKnown RBP12.75□□□□□ -0.37
VRK3-213ENST00000597215 DEAF1O75398 565 aaPredicted RBP12.75□□□□□ -0.37
VRK3-213ENST00000597215 CGAP01215 116 aa12.75□□□□□ -0.37
VRK3-213ENST00000597215 AHCYP23526 432 aa12.75□□□□□ -0.37
VRK3-213ENST00000597215 OMPP47874 163 aa12.75□□□□□ -0.37
VRK3-213ENST00000597215 SLC9A3P48764 834 aa12.75□□□□□ -0.37
VRK3-213ENST00000597215 ASCL1P50553 236 aa12.75□□□□□ -0.37
VRK3-213ENST00000597215 ZP4Q12836 540 aa12.75□□□□□ -0.37
VRK3-213ENST00000597215 MS4A18Q3C1V0 323 aa12.75□□□□□ -0.37
VRK3-213ENST00000597215 ANKDD1AQ495B1 522 aa12.75□□□□□ -0.37
VRK3-213ENST00000597215 CASP12Q6UXS9 341 aa12.75□□□□□ -0.37
VRK3-213ENST00000597215 TMPRSS11FQ6ZWK6 438 aa12.75□□□□□ -0.37
VRK3-213ENST00000597215 CREB3L2Q70SY1 520 aa12.75□□□□□ -0.37
VRK3-213ENST00000597215 LUZP2Q86TE4 346 aa12.75□□□□□ -0.37
VRK3-213ENST00000597215 OAFQ86UD1 273 aa12.75□□□□□ -0.37
VRK3-213ENST00000597215 STK32CQ86UX6 486 aa12.75□□□□□ -0.37
VRK3-213ENST00000597215 MEX3DQ86XN8 651 aaKnown RBP12.75□□□□□ -0.37
VRK3-213ENST00000597215 UEVLDQ8IX04 471 aa12.75□□□□□ -0.37
VRK3-213ENST00000597215 KDM8Q8N371 416 aa12.75□□□□□ -0.37
VRK3-213ENST00000597215 OR4C15Q8NGM1 316 aa12.75□□□□□ -0.37
VRK3-213ENST00000597215 TMEM45BQ96B21 275 aa12.75□□□□□ -0.37
VRK3-213ENST00000597215 FAM46AQ96IP4 442 aaKnown RBP12.75□□□□□ -0.37
VRK3-213ENST00000597215 OPN3Q9H1Y3 402 aaPredicted RBP12.75□□□□□ -0.37
VRK3-213ENST00000597215 FANCFQ9NPI8 374 aa12.75□□□□□ -0.37
VRK3-213ENST00000597215 PLSCR4Q9NRQ2 329 aa12.75□□□□□ -0.37
VRK3-213ENST00000597215 PARPBPQ9NWS1 579 aa12.75□□□□□ -0.37
VRK3-213ENST00000597215 VNN3Q9NY84 501 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms