RNA–Protein interactions for RNA: ENST00000595858.5

DDX49-204, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-204ENST00000595858 HSPB2Q16082 182 aa13.33□□□□□ -0.27
DDX49-204ENST00000595858 ABLIM2Q6H8Q1 611 aa13.33□□□□□ -0.27
DDX49-204ENST00000595858 H1FNTQ75WM6 255 aaPredicted RBP13.33□□□□□ -0.27
DDX49-204ENST00000595858 MAMDC2Q7Z304 686 aaPredicted RBP13.33□□□□□ -0.27
DDX49-204ENST00000595858 SLC46A3Q7Z3Q1 461 aa13.33□□□□□ -0.27
DDX49-204ENST00000595858 MCEMP1Q8IX19 187 aa13.33□□□□□ -0.27
DDX49-204ENST00000595858 LRRC17Q8N6Y2 441 aa13.33□□□□□ -0.27
DDX49-204ENST00000595858 OR4K5Q8NGD3 323 aa13.33□□□□□ -0.27
DDX49-204ENST00000595858 ZNF417Q8TAU3 575 aa13.33□□□□□ -0.27
DDX49-204ENST00000595858 BPIFA2Q96DR5 249 aa13.33□□□□□ -0.27
DDX49-204ENST00000595858 ZNF587Q96SQ5 575 aaPredicted RBP13.33□□□□□ -0.27
DDX49-204ENST00000595858 FKRPQ9H9S5 495 aa13.33□□□□□ -0.27
DDX49-204ENST00000595858 GLRX2Q9NS18 164 aa13.33□□□□□ -0.27
DDX49-204ENST00000595858 ARMC1Q9NVT9 282 aa13.33□□□□□ -0.27
DDX49-204ENST00000595858 VNN3Q9NY84 501 aa13.33□□□□□ -0.27
DDX49-204ENST00000595858 SEC14L4Q9UDX3 406 aa13.33□□□□□ -0.27
DDX49-204ENST00000595858 ING1Q9UK53 422 aaPredicted RBP13.33□□□□□ -0.27
DDX49-204ENST00000595858 RNF6Q9Y252 685 aa13.33□□□□□ -0.27
DDX49-204ENST00000595858 B3GALT5Q9Y2C3 310 aa13.33□□□□□ -0.27
DDX49-204ENST00000595858 ZG16O60844 167 aa13.33□□□□□ -0.28
DDX49-204ENST00000595858 TIPRLO75663 272 aa13.33□□□□□ -0.28
DDX49-204ENST00000595858 OR7A10O76100 309 aa13.33□□□□□ -0.28
DDX49-204ENST00000595858 PLGP00747 810 aaPredicted RBP13.33□□□□□ -0.28
DDX49-204ENST00000595858 ASAH2BP0C7U1 165 aa13.33□□□□□ -0.28
DDX49-204ENST00000595858 FUT1P19526 365 aa13.33□□□□□ -0.28
DDX49-204ENST00000595858 CTSSP25774 331 aa13.33□□□□□ -0.28
DDX49-204ENST00000595858 CTBP2P56545 445 aa13.33□□□□□ -0.28
DDX49-204ENST00000595858 PPP1R8Q12972 351 aaKnown RBP13.33□□□□□ -0.28
DDX49-204ENST00000595858 EXOC3L2Q2M3D2 409 aa13.33□□□□□ -0.28
DDX49-204ENST00000595858 TMEM225Q6GV28 225 aa13.33□□□□□ -0.28
DDX49-204ENST00000595858 CCDC71Q8IV32 467 aaPredicted RBP13.33□□□□□ -0.28
DDX49-204ENST00000595858 CDK20Q8IZL9 346 aa13.33□□□□□ -0.28
DDX49-204ENST00000595858 SCAIQ8N9R8 606 aa13.33□□□□□ -0.28
DDX49-204ENST00000595858 OR4C15Q8NGM1 316 aa13.33□□□□□ -0.28
DDX49-204ENST00000595858 PIGXQ8TBF5 258 aa13.33□□□□□ -0.28
DDX49-204ENST00000595858 LIPHQ8WWY8 451 aa13.33□□□□□ -0.28
DDX49-204ENST00000595858 DGCR14Q96DF8 476 aaKnown RBP13.33□□□□□ -0.28
DDX49-204ENST00000595858 GMPPAQ96IJ6 420 aaPredicted RBP13.33□□□□□ -0.28
DDX49-204ENST00000595858 PKP2Q99959 881 aa13.33□□□□□ -0.28
DDX49-204ENST00000595858 PSD2Q9BQI7 771 aa13.33□□□□□ -0.28
DDX49-204ENST00000595858 ASPNQ9BXN1 380 aa13.33□□□□□ -0.28
DDX49-204ENST00000595858 MRPS26Q9BYN8 205 aaKnown RBP13.33□□□□□ -0.28
DDX49-204ENST00000595858 REEP1Q9H902 201 aa13.33□□□□□ -0.28
DDX49-204ENST00000595858 CHST11Q9NPF2 352 aa13.33□□□□□ -0.28
DDX49-204ENST00000595858 MRPL39Q9NYK5 338 aaKnown RBP13.33□□□□□ -0.28
DDX49-204ENST00000595858 KLHL9Q9P2J3 617 aa13.33□□□□□ -0.28
DDX49-204ENST00000595858 KLHL13Q9P2N7 655 aa13.33□□□□□ -0.28
DDX49-204ENST00000595858 TMCC3Q9ULS5 477 aa13.33□□□□□ -0.28
DDX49-204ENST00000595858 CLEC4AQ9UMR7 237 aa13.33□□□□□ -0.28
DDX49-204ENST00000595858 SAMHD1Q9Y3Z3 626 aaKnown RBP13.33□□□□□ -0.28
DDX49-204ENST00000595858 U3KQV3 271 aa13.33□□□□□ -0.28
DDX49-204ENST00000595858 GNGT2O14610 69 aa13.32□□□□□ -0.28
DDX49-204ENST00000595858 AGFG2O95081 481 aa13.32□□□□□ -0.28
DDX49-204ENST00000595858 LDLRP01130 860 aa13.32□□□□□ -0.28
DDX49-204ENST00000595858 CRHP06850 196 aa13.32□□□□□ -0.28
DDX49-204ENST00000595858 MAKP20794 623 aa13.32□□□□□ -0.28
DDX49-204ENST00000595858 SMSP52788 366 aa13.32□□□□□ -0.28
DDX49-204ENST00000595858 SLC17A1Q14916 467 aa13.32□□□□□ -0.28
DDX49-204ENST00000595858 GUSBP1Q15486 140 aa13.32□□□□□ -0.28
DDX49-204ENST00000595858 MEX3DQ86XN8 651 aaKnown RBP13.32□□□□□ -0.28
DDX49-204ENST00000595858 OR5J2Q8NH18 312 aa13.32□□□□□ -0.28
DDX49-204ENST00000595858 BCO1Q9HAY6 547 aa13.32□□□□□ -0.28
DDX49-204ENST00000595858 GP6Q9HCN6 339 aa13.32□□□□□ -0.28
DDX49-204ENST00000595858 COQ3Q9NZJ6 369 aa13.32□□□□□ -0.28
DDX49-204ENST00000595858 DNAJB9Q9UBS3 223 aa13.32□□□□□ -0.28
DDX49-204ENST00000595858 ZNF229Q9UJW7 825 aa13.32□□□□□ -0.28
DDX49-204ENST00000595858 MYO18BQ8IUG5 2567 aa13.32□□□□□ -0.28
DDX49-204ENST00000595858 IGKV3D-15A0A087WSY6 115 aa13.31□□□□□ -0.28
DDX49-204ENST00000595858 A0A1W2PNV4 684 aa13.31□□□□□ -0.28
DDX49-204ENST00000595858 ZNF716A6NP11 495 aa13.31□□□□□ -0.28
DDX49-204ENST00000595858 MS4A18H0YCH9 400 aa13.31□□□□□ -0.28
DDX49-204ENST00000595858 HNRNPRO43390 633 aaKnown RBP13.31□□□□□ -0.28
DDX49-204ENST00000595858 SS18L1O75177 396 aaPredicted RBP13.31□□□□□ -0.28
DDX49-204ENST00000595858 TNFSF13O75888 250 aa13.31□□□□□ -0.28
DDX49-204ENST00000595858 VAMP5O95183 116 aa13.31□□□□□ -0.28
DDX49-204ENST00000595858 CLPTM1O96005 669 aa13.31□□□□□ -0.28
DDX49-204ENST00000595858 HIST1H2ABP04908 130 aa13.31□□□□□ -0.28
DDX49-204ENST00000595858 YES1P07947 543 aa13.31□□□□□ -0.28
DDX49-204ENST00000595858 KIR2DL2P43627 348 aaPredicted RBP13.31□□□□□ -0.28
DDX49-204ENST00000595858 OMPP47874 163 aa13.31□□□□□ -0.28
DDX49-204ENST00000595858 SLC16A1P53985 500 aa13.31□□□□□ -0.28
DDX49-204ENST00000595858 PMS2P3Q13401 168 aa13.31□□□□□ -0.28
DDX49-204ENST00000595858 MS4A18Q3C1V0 323 aa13.31□□□□□ -0.28
DDX49-204ENST00000595858 TMPRSS11FQ6ZWK6 438 aa13.31□□□□□ -0.28
DDX49-204ENST00000595858 FAM214BQ7L5A3 538 aa13.31□□□□□ -0.28
DDX49-204ENST00000595858 HIST3H2AQ7L7L0 130 aa13.31□□□□□ -0.28
DDX49-204ENST00000595858 TUSC5Q8IXB3 177 aa13.31□□□□□ -0.28
DDX49-204ENST00000595858 KDM8Q8N371 416 aa13.31□□□□□ -0.28
DDX49-204ENST00000595858 ADPRHL1Q8NDY3 354 aa13.31□□□□□ -0.28
DDX49-204ENST00000595858 HIST1H2ACQ93077 130 aa13.31□□□□□ -0.28
DDX49-204ENST00000595858 SDCCAG3Q96C92 435 aa13.31□□□□□ -0.28
DDX49-204ENST00000595858 SF3B5Q9BWJ5 86 aaKnown RBP13.31□□□□□ -0.28
DDX49-204ENST00000595858 ZNF629Q9UEG4 869 aaPredicted RBP13.31□□□□□ -0.28
DDX49-204ENST00000595858 RASD1Q9Y272 281 aa13.31□□□□□ -0.28
DDX49-204ENST00000595858 NCOA6Q14686 2063 aaPredicted RBP13.31□□□□□ -0.28
DDX49-204ENST00000595858 INTS1Q8N201 2190 aaKnown RBP13.31□□□□□ -0.28
DDX49-204ENST00000595858 CLEC18AA5D8T8 446 aa13.31□□□□□ -0.28
DDX49-204ENST00000595858 WIPF3A6NGB9 483 aa13.31□□□□□ -0.28
DDX49-204ENST00000595858 PLPP3O14495 311 aa13.31□□□□□ -0.28
DDX49-204ENST00000595858 CLOCKO15516 846 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms