RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 FCGR1BQ92637 280 aa17.64■□□□□ 0.41
LSM4-203ENST00000593829 PITX2Q99697 317 aa17.64■□□□□ 0.41
LSM4-203ENST00000593829 MMP27Q9H306 513 aa17.64■□□□□ 0.41
LSM4-203ENST00000593829 ACER3Q9NUN7 267 aa17.64■□□□□ 0.41
LSM4-203ENST00000593829 LRRK2Q5S007 2527 aa17.63■□□□□ 0.41
LSM4-203ENST00000593829 CD8B2A6NJW9 211 aa17.63■□□□□ 0.41
LSM4-203ENST00000593829 ADAM11O75078 769 aa17.63■□□□□ 0.41
LSM4-203ENST00000593829 PRKAR1BP31321 381 aa17.63■□□□□ 0.41
LSM4-203ENST00000593829 ARHGDIAP52565 204 aa17.63■□□□□ 0.41
LSM4-203ENST00000593829 SUCLG1P53597 346 aaKnown RBP17.63■□□□□ 0.41
LSM4-203ENST00000593829 KCNJ8Q15842 424 aa17.63■□□□□ 0.41
LSM4-203ENST00000593829 VMACQ2NL98 169 aa17.63■□□□□ 0.41
LSM4-203ENST00000593829 ZNF808Q8N4W9 903 aaPredicted RBP17.63■□□□□ 0.41
LSM4-203ENST00000593829 ITLN2Q8WWU7 325 aaPredicted RBP17.63■□□□□ 0.41
LSM4-203ENST00000593829 LGALS12Q96DT0 336 aa17.63■□□□□ 0.41
LSM4-203ENST00000593829 COQ3Q9NZJ6 369 aa17.63■□□□□ 0.41
LSM4-203ENST00000593829 CHST2Q9Y4C5 530 aa17.63■□□□□ 0.41
LSM4-203ENST00000593829 BAHCC1Q9P281 2608 aa17.63■□□□□ 0.41
LSM4-203ENST00000593829 CLCA1A8K7I4 914 aa17.62■□□□□ 0.41
LSM4-203ENST00000593829 FAAHO00519 579 aa17.62■□□□□ 0.41
LSM4-203ENST00000593829 AP3D1O14617 1153 aa17.62■□□□□ 0.41
LSM4-203ENST00000593829 UPK1BO75841 260 aa17.62■□□□□ 0.41
LSM4-203ENST00000593829 MT-ND2P03891 347 aa17.62■□□□□ 0.41
LSM4-203ENST00000593829 GP1BBP13224 206 aa17.62■□□□□ 0.41
LSM4-203ENST00000593829 IL11P20809 199 aa17.62■□□□□ 0.41
LSM4-203ENST00000593829 AGAP20933 346 aa17.62■□□□□ 0.41
LSM4-203ENST00000593829 S100A1P23297 94 aa17.62■□□□□ 0.41
LSM4-203ENST00000593829 TGFBR2P37173 567 aa17.62■□□□□ 0.41
LSM4-203ENST00000593829 IDH2P48735 452 aaKnown RBP17.62■□□□□ 0.41
LSM4-203ENST00000593829 CLDN15P56746 228 aa17.62■□□□□ 0.41
LSM4-203ENST00000593829 PCBP3P57721 371 aaKnown RBP17.62■□□□□ 0.41
LSM4-203ENST00000593829 VBP1P61758 197 aa17.62■□□□□ 0.41
LSM4-203ENST00000593829 SELENBP1Q13228 472 aa17.62■□□□□ 0.41
LSM4-203ENST00000593829 MAD2L1BPQ15013 274 aaPredicted RBP17.62■□□□□ 0.41
LSM4-203ENST00000593829 NDUFA5Q16718 116 aa17.62■□□□□ 0.41
LSM4-203ENST00000593829 OR2T5Q6IEZ7 315 aa17.62■□□□□ 0.41
LSM4-203ENST00000593829 XKRXQ6PP77 449 aa17.62■□□□□ 0.41
LSM4-203ENST00000593829 ZNF550Q7Z398 422 aa17.62■□□□□ 0.41
LSM4-203ENST00000593829 GGNQ86UU5 652 aa17.62■□□□□ 0.41
LSM4-203ENST00000593829 ZDHHC21Q8IVQ6 265 aa17.62■□□□□ 0.41
LSM4-203ENST00000593829 OR10Q1Q8NGQ4 319 aa17.62■□□□□ 0.41
LSM4-203ENST00000593829 OR2T29Q8NH02 315 aa17.62■□□□□ 0.41
LSM4-203ENST00000593829 TMEM185BQ9H7F4 350 aa17.62■□□□□ 0.41
LSM4-203ENST00000593829 IL1RAPQ9NPH3 570 aa17.62■□□□□ 0.41
LSM4-203ENST00000593829 VNN3Q9NY84 501 aa17.62■□□□□ 0.41
LSM4-203ENST00000593829 DIDO1Q9BTC0 2240 aaKnown RBP17.62■□□□□ 0.41
LSM4-203ENST00000593829 HEATR5AQ86XA9 2040 aa17.62■□□□□ 0.41
LSM4-203ENST00000593829 KDM4EB2RXH2 506 aaPredicted RBP17.62■□□□□ 0.41
LSM4-203ENST00000593829 H0YC42 278 aa17.62■□□□□ 0.41
LSM4-203ENST00000593829 EFNA2O43921 213 aa17.62■□□□□ 0.41
LSM4-203ENST00000593829 SEMG1P04279 462 aa17.62■□□□□ 0.41
LSM4-203ENST00000593829 GKN3PP0CG01 181 aa17.62■□□□□ 0.41
LSM4-203ENST00000593829 FPR1P21462 350 aa17.62■□□□□ 0.41
LSM4-203ENST00000593829 DNAJA1P31689 397 aaKnown RBP17.62■□□□□ 0.41
LSM4-203ENST00000593829 MAP2K4P45985 399 aa17.62■□□□□ 0.41
LSM4-203ENST00000593829 GSSP48637 474 aa17.62■□□□□ 0.41
LSM4-203ENST00000593829 DAPP51397 102 aa17.62■□□□□ 0.41
LSM4-203ENST00000593829 DLX5P56178 289 aa17.62■□□□□ 0.41
LSM4-203ENST00000593829 ERICH5Q6P6B1 374 aa17.62■□□□□ 0.41
LSM4-203ENST00000593829 ADGRE4PQ86SQ3 457 aa17.62■□□□□ 0.41
LSM4-203ENST00000593829 UCN2Q96RP3 112 aa17.62■□□□□ 0.41
LSM4-203ENST00000593829 GMPPBQ9Y5P6 360 aa17.62■□□□□ 0.41
LSM4-203ENST00000593829 GJE1A6NN92 205 aa17.61■□□□□ 0.41
LSM4-203ENST00000593829 EIF1AYO14602 144 aaKnown RBP17.61■□□□□ 0.41
LSM4-203ENST00000593829 OPN1LWP04000 364 aa17.61■□□□□ 0.41
LSM4-203ENST00000593829 FMO3P31513 532 aa17.61■□□□□ 0.41
LSM4-203ENST00000593829 TIMP3P35625 211 aa17.61■□□□□ 0.41
LSM4-203ENST00000593829 RIPPLY2Q5TAB7 128 aa17.61■□□□□ 0.41
LSM4-203ENST00000593829 ESPNLQ6ZVH7 1005 aa17.61■□□□□ 0.41
LSM4-203ENST00000593829 SEM1Q6ZVN7 128 aa17.61■□□□□ 0.41
LSM4-203ENST00000593829 PLEKHM3Q6ZWE6 761 aa17.61■□□□□ 0.41
LSM4-203ENST00000593829 GRINAQ7Z429 371 aa17.61■□□□□ 0.41
LSM4-203ENST00000593829 SLC38A4Q969I6 547 aa17.61■□□□□ 0.41
LSM4-203ENST00000593829 SERINC1Q9NRX5 453 aa17.61■□□□□ 0.41
LSM4-203ENST00000593829 PHF3Q92576 2039 aaKnown RBP17.61■□□□□ 0.41
LSM4-203ENST00000593829 MITFO75030 526 aaPredicted RBP17.6■□□□□ 0.41
LSM4-203ENST00000593829 GCM2O75603 506 aaPredicted RBP17.6■□□□□ 0.41
LSM4-203ENST00000593829 MFN2O95140 757 aa17.6■□□□□ 0.41
LSM4-203ENST00000593829 PSMB9P28065 219 aa17.6■□□□□ 0.41
LSM4-203ENST00000593829 APOBEC1P41238 236 aaKnown RBP17.6■□□□□ 0.41
LSM4-203ENST00000593829 ACAA2P42765 397 aaKnown RBP17.6■□□□□ 0.41
LSM4-203ENST00000593829 NCS1P62166 190 aa17.6■□□□□ 0.41
LSM4-203ENST00000593829 TMEM236Q5W0B7 351 aa17.6■□□□□ 0.41
LSM4-203ENST00000593829 KLHL15Q96M94 604 aa17.6■□□□□ 0.41
LSM4-203ENST00000593829 PINK1Q9BXM7 581 aa17.6■□□□□ 0.41
LSM4-203ENST00000593829 RSPO3Q9BXY4 272 aaPredicted RBP17.6■□□□□ 0.41
LSM4-203ENST00000593829 NXF2Q9GZY0 626 aaKnown RBP17.6■□□□□ 0.41
LSM4-203ENST00000593829 MOV10Q9HCE1 1003 aaKnown RBP17.6■□□□□ 0.41
LSM4-203ENST00000593829 CLCF1Q9UBD9 225 aa17.6■□□□□ 0.41
LSM4-203ENST00000593829 RNF6Q9Y252 685 aa17.6■□□□□ 0.41
LSM4-203ENST00000593829 MBD3L4A6NDZ8 208 aaPredicted RBP17.6■□□□□ 0.41
LSM4-203ENST00000593829 MBD3L3A6NE82 208 aaPredicted RBP17.6■□□□□ 0.41
LSM4-203ENST00000593829 MBD3L5A6NJ08 208 aaPredicted RBP17.6■□□□□ 0.41
LSM4-203ENST00000593829 METTL15A6NJ78 407 aa17.6■□□□□ 0.41
LSM4-203ENST00000593829 ADAMDEC1O15204 470 aa17.6■□□□□ 0.41
LSM4-203ENST00000593829 IL2RAP01589 272 aa17.6■□□□□ 0.41
LSM4-203ENST00000593829 SFTPDP35247 375 aa17.6■□□□□ 0.41
LSM4-203ENST00000593829 SLC1A3P43003 542 aa17.6■□□□□ 0.41
LSM4-203ENST00000593829 HTR3AP46098 478 aa17.6■□□□□ 0.41
LSM4-203ENST00000593829 VEZF1Q14119 521 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms