RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 GPR85P60893 370 aa12.12□□□□□ -0.47
VMP1-217ENST00000593168 BLMHQ13867 455 aa12.12□□□□□ -0.47
VMP1-217ENST00000593168 SGCBQ16585 318 aa12.12□□□□□ -0.47
VMP1-217ENST00000593168 HYAL4Q2M3T9 481 aa12.12□□□□□ -0.47
VMP1-217ENST00000593168 SYT14P1Q58G82 188 aa12.12□□□□□ -0.47
VMP1-217ENST00000593168 TMEM154Q6P9G4 183 aa12.12□□□□□ -0.47
VMP1-217ENST00000593168 TCEANCQ8N8B7 351 aa12.12□□□□□ -0.47
VMP1-217ENST00000593168 LRRC75AQ8NAA5 344 aa12.12□□□□□ -0.47
VMP1-217ENST00000593168 BPIFB6Q8NFQ5 453 aa12.12□□□□□ -0.47
VMP1-217ENST00000593168 TMEM163Q8TC26 289 aa12.12□□□□□ -0.47
VMP1-217ENST00000593168 IL4I1Q96RQ9 567 aa12.12□□□□□ -0.47
VMP1-217ENST00000593168 PIGQQ9BRB3 760 aa12.12□□□□□ -0.47
VMP1-217ENST00000593168 IFT27Q9BW83 186 aa12.12□□□□□ -0.47
VMP1-217ENST00000593168 OR2B2Q9GZK3 357 aa12.12□□□□□ -0.47
VMP1-217ENST00000593168 NRIP3Q9NQ35 241 aa12.12□□□□□ -0.47
VMP1-217ENST00000593168 CLN6Q9NWW5 311 aa12.12□□□□□ -0.47
VMP1-217ENST00000593168 MRPL39Q9NYK5 338 aaKnown RBP12.12□□□□□ -0.47
VMP1-217ENST00000593168 B4GALT7Q9UBV7 327 aa12.12□□□□□ -0.47
VMP1-217ENST00000593168 IL20RAQ9UHF4 553 aa12.12□□□□□ -0.47
VMP1-217ENST00000593168 CACNA1DQ01668 2161 aa12.11□□□□□ -0.47
VMP1-217ENST00000593168 A0A087WXM4 84 aa12.11□□□□□ -0.47
VMP1-217ENST00000593168 OR2M5A3KFT3 312 aa12.11□□□□□ -0.47
VMP1-217ENST00000593168 IDH3BO43837 385 aa12.11□□□□□ -0.47
VMP1-217ENST00000593168 PRKYO43930 277 aa12.11□□□□□ -0.47
VMP1-217ENST00000593168 SMIM18P0DKX4 95 aa12.11□□□□□ -0.47
VMP1-217ENST00000593168 TFPIP10646 304 aa12.11□□□□□ -0.47
VMP1-217ENST00000593168 IL11P20809 199 aa12.11□□□□□ -0.47
VMP1-217ENST00000593168 GRPRP30550 384 aa12.11□□□□□ -0.47
VMP1-217ENST00000593168 IDUAP35475 653 aa12.11□□□□□ -0.47
VMP1-217ENST00000593168 AQP2P41181 271 aa12.11□□□□□ -0.47
VMP1-217ENST00000593168 TNFSF10P50591 281 aa12.11□□□□□ -0.47
VMP1-217ENST00000593168 RAC1P63000 192 aa12.11□□□□□ -0.47
VMP1-217ENST00000593168 TUBA4AP68366 448 aa12.11□□□□□ -0.47
VMP1-217ENST00000593168 GALNTL5Q7Z4T8 443 aa12.11□□□□□ -0.47
VMP1-217ENST00000593168 NANOGNBQ7Z5D8 188 aa12.11□□□□□ -0.47
VMP1-217ENST00000593168 SCAIQ8N9R8 606 aa12.11□□□□□ -0.47
VMP1-217ENST00000593168 TMEM178AQ8NBL3 297 aa12.11□□□□□ -0.47
VMP1-217ENST00000593168 GALNT11Q8NCW6 608 aa12.11□□□□□ -0.47
VMP1-217ENST00000593168 TSPAN14Q8NG11 270 aa12.11□□□□□ -0.47
VMP1-217ENST00000593168 OR5M1Q8NGP8 315 aa12.11□□□□□ -0.47
VMP1-217ENST00000593168 OR5J2Q8NH18 312 aa12.11□□□□□ -0.47
VMP1-217ENST00000593168 CPT1CQ8TCG5 803 aa12.11□□□□□ -0.47
VMP1-217ENST00000593168 SSC4DQ8WTU2 575 aa12.11□□□□□ -0.47
VMP1-217ENST00000593168 IPCEF1Q8WWN9 437 aaPredicted RBP12.11□□□□□ -0.47
VMP1-217ENST00000593168 SLC25A36Q96CQ1 311 aa12.11□□□□□ -0.47
VMP1-217ENST00000593168 PLEKHA8Q96JA3 519 aa12.11□□□□□ -0.47
VMP1-217ENST00000593168 ARL5BQ96KC2 179 aa12.11□□□□□ -0.47
VMP1-217ENST00000593168 SMAD5Q99717 465 aaKnown RBP12.11□□□□□ -0.47
VMP1-217ENST00000593168 TAPBPLQ9BX59 468 aa12.11□□□□□ -0.47
VMP1-217ENST00000593168 ASPNQ9BXN1 380 aa12.11□□□□□ -0.47
VMP1-217ENST00000593168 HES7Q9BYE0 225 aa12.11□□□□□ -0.47
VMP1-217ENST00000593168 MRPS26Q9BYN8 205 aaKnown RBP12.11□□□□□ -0.47
VMP1-217ENST00000593168 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.11□□□□□ -0.47
VMP1-217ENST00000593168 FN3KQ9H479 309 aa12.11□□□□□ -0.47
VMP1-217ENST00000593168 DUSP21Q9H596 190 aa12.11□□□□□ -0.47
VMP1-217ENST00000593168 CMC2Q9NRP2 79 aa12.11□□□□□ -0.47
VMP1-217ENST00000593168 TRAPPC4Q9Y296 219 aa12.11□□□□□ -0.47
VMP1-217ENST00000593168 SLC6A5Q9Y345 797 aa12.11□□□□□ -0.47
VMP1-217ENST00000593168 HDGFL3Q9Y3E1 203 aa12.11□□□□□ -0.47
VMP1-217ENST00000593168 A1L4Q6 167 aa12.1□□□□□ -0.47
VMP1-217ENST00000593168 LIPT2A6NK58 231 aa12.1□□□□□ -0.47
VMP1-217ENST00000593168 TRIM64CA6NLI5 447 aa12.1□□□□□ -0.47
VMP1-217ENST00000593168 SNTNA6NMZ2 147 aa12.1□□□□□ -0.47
VMP1-217ENST00000593168 TTLL8A6PVC2 850 aa12.1□□□□□ -0.47
VMP1-217ENST00000593168 BLOC1S5-TXNDC5H3BN57 136 aa12.1□□□□□ -0.47
VMP1-217ENST00000593168 LINC01387J3KSC0 135 aa12.1□□□□□ -0.47
VMP1-217ENST00000593168 M0R129 80 aa12.1□□□□□ -0.47
VMP1-217ENST00000593168 IMPA2O14732 288 aa12.1□□□□□ -0.47
VMP1-217ENST00000593168 XPNPEP2O43895 674 aa12.1□□□□□ -0.47
VMP1-217ENST00000593168 MRPS14O60783 128 aaKnown RBP12.1□□□□□ -0.47
VMP1-217ENST00000593168 SMNDC1O75940 238 aaKnown RBP eCLIP12.1□□□□□ -0.47
VMP1-217ENST00000593168 GLSO94925 669 aaPredicted RBP12.1□□□□□ -0.47
VMP1-217ENST00000593168 PPP1R3DO95685 299 aa12.1□□□□□ -0.47
VMP1-217ENST00000593168 HPNP05981 417 aa12.1□□□□□ -0.47
VMP1-217ENST00000593168 CD14P08571 375 aa12.1□□□□□ -0.47
VMP1-217ENST00000593168 RFPL3SP0C7P2 107 aa12.1□□□□□ -0.47
VMP1-217ENST00000593168 IMPDH2P12268 514 aa12.1□□□□□ -0.47
VMP1-217ENST00000593168 RPL4P36578 427 aaKnown RBP12.1□□□□□ -0.47
VMP1-217ENST00000593168 B3GALT5-AS1P59052 145 aa12.1□□□□□ -0.47
VMP1-217ENST00000593168 SLC35A2P78381 396 aa12.1□□□□□ -0.47
VMP1-217ENST00000593168 RPL18Q07020 188 aaKnown RBP12.1□□□□□ -0.47
VMP1-217ENST00000593168 ZP4Q12836 540 aa12.1□□□□□ -0.47
VMP1-217ENST00000593168 APOFQ13790 326 aa12.1□□□□□ -0.47
VMP1-217ENST00000593168 SMN1Q16637 294 aaKnown RBP12.1□□□□□ -0.47
VMP1-217ENST00000593168 ALG10Q5BKT4 473 aa12.1□□□□□ -0.47
VMP1-217ENST00000593168 ZNF766Q5HY98 468 aa12.1□□□□□ -0.47
VMP1-217ENST00000593168 RAET1LQ5VY80 246 aa12.1□□□□□ -0.47
VMP1-217ENST00000593168 SLC6A19Q695T7 634 aa12.1□□□□□ -0.47
VMP1-217ENST00000593168 ARHGAP11AQ6P4F7 1023 aa12.1□□□□□ -0.47
VMP1-217ENST00000593168 ATP6V1C2Q8NEY4 427 aa12.1□□□□□ -0.47
VMP1-217ENST00000593168 MOSPD2Q8NHP6 518 aa12.1□□□□□ -0.47
VMP1-217ENST00000593168 ERMAPQ96PL5 475 aaPredicted RBP12.1□□□□□ -0.47
VMP1-217ENST00000593168 CCNB1IP1Q9NPC3 277 aa12.1□□□□□ -0.47
VMP1-217ENST00000593168 KLHL1Q9NR64 748 aa12.1□□□□□ -0.47
VMP1-217ENST00000593168 QPCTLQ9NXS2 382 aa12.1□□□□□ -0.47
VMP1-217ENST00000593168 ALKBH4Q9NXW9 302 aa12.1□□□□□ -0.47
VMP1-217ENST00000593168 TAS2R5Q9NYW4 299 aa12.1□□□□□ -0.47
VMP1-217ENST00000593168 RPH3AQ9Y2J0 694 aaPredicted RBP12.1□□□□□ -0.47
VMP1-217ENST00000593168 CENPEQ02224 2701 aa12.09□□□□□ -0.47
VMP1-217ENST00000593168 GJE1A6NN92 205 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms