RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 NANOGNBQ7Z5D8 188 aa14.31□□□□□ -0.12
MBD1-227ENST00000592060 RAB43Q86YS6 212 aa14.31□□□□□ -0.12
MBD1-227ENST00000592060 DEFB123Q8N688 67 aa14.31□□□□□ -0.12
MBD1-227ENST00000592060 TSPAN32Q96QS1 320 aa14.31□□□□□ -0.12
MBD1-227ENST00000592060 CDX2Q99626 313 aaPredicted RBP14.31□□□□□ -0.12
MBD1-227ENST00000592060 CYSLTR2Q9NS75 346 aa14.31□□□□□ -0.12
MBD1-227ENST00000592060 RASD1Q9Y272 281 aa14.31□□□□□ -0.12
MBD1-227ENST00000592060 CPAMD8Q8IZJ3 1885 aa14.31□□□□□ -0.12
MBD1-227ENST00000592060 GMFGO60234 142 aa14.31□□□□□ -0.12
MBD1-227ENST00000592060 SERPINI2O75830 405 aa14.31□□□□□ -0.12
MBD1-227ENST00000592060 WISP1O95388 367 aa14.31□□□□□ -0.12
MBD1-227ENST00000592060 F13BP05160 661 aa14.31□□□□□ -0.12
MBD1-227ENST00000592060 ANKRD34CP0C6C1 535 aa14.31□□□□□ -0.12
MBD1-227ENST00000592060 HTR3AP46098 478 aa14.31□□□□□ -0.12
MBD1-227ENST00000592060 RPS5P46782 204 aaKnown RBP14.31□□□□□ -0.12
MBD1-227ENST00000592060 CCDC58Q4VC31 144 aa14.31□□□□□ -0.12
MBD1-227ENST00000592060 MESTQ5EB52 335 aa14.31□□□□□ -0.12
MBD1-227ENST00000592060 LYSMD4Q5XG99 296 aa14.31□□□□□ -0.12
MBD1-227ENST00000592060 GUSBP11Q6P575 273 aa14.31□□□□□ -0.12
MBD1-227ENST00000592060 PAMR1Q6UXH9 720 aa14.31□□□□□ -0.12
MBD1-227ENST00000592060 IL20RBQ6UXL0 311 aa14.31□□□□□ -0.12
MBD1-227ENST00000592060 RABEPKQ7Z6M1 372 aa14.31□□□□□ -0.12
MBD1-227ENST00000592060 LRRC28Q86X40 367 aaPredicted RBP14.31□□□□□ -0.12
MBD1-227ENST00000592060 RDH10Q8IZV5 341 aa14.31□□□□□ -0.12
MBD1-227ENST00000592060 STT3BQ8TCJ2 826 aa14.31□□□□□ -0.12
MBD1-227ENST00000592060 THAP4Q8WY91 577 aa14.31□□□□□ -0.12
MBD1-227ENST00000592060 RNF166Q96A37 237 aaPredicted RBP14.31□□□□□ -0.12
MBD1-227ENST00000592060 MRPL48Q96GC5 212 aaKnown RBP14.31□□□□□ -0.12
MBD1-227ENST00000592060 TBL1XR1Q9BZK7 514 aa14.31□□□□□ -0.12
MBD1-227ENST00000592060 MOKQ9UQ07 419 aa14.31□□□□□ -0.12
MBD1-227ENST00000592060 PCNX3Q9H6A9 2034 aa14.3□□□□□ -0.12
MBD1-227ENST00000592060 CACNA1EQ15878 2313 aa14.3□□□□□ -0.12
MBD1-227ENST00000592060 FAM171A2A8MVW0 826 aa14.3□□□□□ -0.12
MBD1-227ENST00000592060 FAM25AB3EWG3 89 aa14.3□□□□□ -0.12
MBD1-227ENST00000592060 FAM25CB3EWG5 89 aa14.3□□□□□ -0.12
MBD1-227ENST00000592060 FAM25GB3EWG6 89 aa14.3□□□□□ -0.12
MBD1-227ENST00000592060 EIF4EP06730 217 aaKnown RBP14.3□□□□□ -0.12
MBD1-227ENST00000592060 UCHL1P09936 223 aa14.3□□□□□ -0.12
MBD1-227ENST00000592060 PGCP20142 388 aa14.3□□□□□ -0.12
MBD1-227ENST00000592060 EDNRAP25101 427 aa14.3□□□□□ -0.12
MBD1-227ENST00000592060 EVI2BP34910 448 aa14.3□□□□□ -0.12
MBD1-227ENST00000592060 DAB2P98082 770 aa14.3□□□□□ -0.12
MBD1-227ENST00000592060 SLC25A35Q3KQZ1 300 aa14.3□□□□□ -0.12
MBD1-227ENST00000592060 TRIQKQ629K1 86 aa14.3□□□□□ -0.12
MBD1-227ENST00000592060 TSSK4Q6SA08 328 aa14.3□□□□□ -0.12
MBD1-227ENST00000592060 SHISA6Q6ZSJ9 500 aa14.3□□□□□ -0.12
MBD1-227ENST00000592060 SLC16A9Q7RTY1 509 aa14.3□□□□□ -0.12
MBD1-227ENST00000592060 TSSK2Q96PF2 358 aa14.3□□□□□ -0.12
MBD1-227ENST00000592060 PTDSS2Q9BVG9 487 aa14.3□□□□□ -0.12
MBD1-227ENST00000592060 MMP28Q9H239 520 aa14.3□□□□□ -0.12
MBD1-227ENST00000592060 EXTL2Q9UBQ6 330 aa14.3□□□□□ -0.12
MBD1-227ENST00000592060 ZNF346Q9UL40 294 aaKnown RBP14.3□□□□□ -0.12
MBD1-227ENST00000592060 USP34Q70CQ2 3546 aa14.3□□□□□ -0.12
MBD1-227ENST00000592060 TRAV36DV7A0A075B6V5 113 aa14.29□□□□□ -0.12
MBD1-227ENST00000592060 B4DXG7 233 aa14.29□□□□□ -0.12
MBD1-227ENST00000592060 KHNYNO15037 678 aaKnown RBP14.29□□□□□ -0.12
MBD1-227ENST00000592060 CPNE3O75131 537 aaKnown RBP14.29□□□□□ -0.12
MBD1-227ENST00000592060 CXCR1P25024 350 aa14.29□□□□□ -0.12
MBD1-227ENST00000592060 ITPKBP27987 946 aa14.29□□□□□ -0.12
MBD1-227ENST00000592060 PSMB10P40306 273 aa14.29□□□□□ -0.12
MBD1-227ENST00000592060 NR0B2Q15466 257 aa14.29□□□□□ -0.12
MBD1-227ENST00000592060 ZNF544Q6NX49 715 aa14.29□□□□□ -0.12
MBD1-227ENST00000592060 UNQ9370/PRO34162Q6UXP9 181 aa14.29□□□□□ -0.12
MBD1-227ENST00000592060 TIGD4Q8IY51 512 aa14.29□□□□□ -0.12
MBD1-227ENST00000592060 ZNF511Q8NB15 262 aa14.29□□□□□ -0.12
MBD1-227ENST00000592060 SLC38A9Q8NBW4 561 aa14.29□□□□□ -0.12
MBD1-227ENST00000592060 OR4M1Q8NGD0 313 aa14.29□□□□□ -0.12
MBD1-227ENST00000592060 KCNJ15Q99712 375 aa14.29□□□□□ -0.12
MBD1-227ENST00000592060 MFRPQ9BY79 579 aa14.29□□□□□ -0.12
MBD1-227ENST00000592060 SEMA4CQ9C0C4 833 aa14.29□□□□□ -0.12
MBD1-227ENST00000592060 NDEL1Q9GZM8 345 aa14.29□□□□□ -0.12
MBD1-227ENST00000592060 RXFP3Q9NSD7 469 aa14.29□□□□□ -0.12
MBD1-227ENST00000592060 CABIN1Q9Y6J0 2220 aa14.29□□□□□ -0.12
MBD1-227ENST00000592060 IGHV3-20A0A0C4DH32 117 aa14.29□□□□□ -0.12
MBD1-227ENST00000592060 TRBV2A0A0J9YWF9 115 aa14.29□□□□□ -0.12
MBD1-227ENST00000592060 A0A1B0GTQ1 180 aa14.29□□□□□ -0.12
MBD1-227ENST00000592060 A0A1W2PQM1 296 aa14.29□□□□□ -0.12
MBD1-227ENST00000592060 DCTN6O00399 190 aa14.29□□□□□ -0.12
MBD1-227ENST00000592060 SCO2O43819 266 aa14.29□□□□□ -0.12
MBD1-227ENST00000592060 GPRIN2O60269 458 aa14.29□□□□□ -0.12
MBD1-227ENST00000592060 GATBO75879 557 aaKnown RBP14.29□□□□□ -0.12
MBD1-227ENST00000592060 TIAF1O95411 115 aa14.29□□□□□ -0.12
MBD1-227ENST00000592060 GP1BBP13224 206 aa14.29□□□□□ -0.12
MBD1-227ENST00000592060 RAB3BP20337 219 aa14.29□□□□□ -0.12
MBD1-227ENST00000592060 GRPRP30550 384 aa14.29□□□□□ -0.12
MBD1-227ENST00000592060 KIR2DL3P43628 341 aa14.29□□□□□ -0.12
MBD1-227ENST00000592060 MAP2K3P46734 347 aa14.29□□□□□ -0.12
MBD1-227ENST00000592060 DHPSP49366 369 aaPredicted RBP14.29□□□□□ -0.12
MBD1-227ENST00000592060 P2RX1P51575 399 aa14.29□□□□□ -0.12
MBD1-227ENST00000592060 RNF4P78317 190 aa14.29□□□□□ -0.12
MBD1-227ENST00000592060 ACY1Q03154 408 aa14.29□□□□□ -0.12
MBD1-227ENST00000592060 CBFBQ13951 182 aa14.29□□□□□ -0.12
MBD1-227ENST00000592060 CEP78Q5JTW2 689 aa14.29□□□□□ -0.12
MBD1-227ENST00000592060 C1QL3Q5VWW1 255 aa14.29□□□□□ -0.12
MBD1-227ENST00000592060 GPR139Q6DWJ6 353 aa14.29□□□□□ -0.12
MBD1-227ENST00000592060 ANKRD37Q7Z713 158 aa14.29□□□□□ -0.12
MBD1-227ENST00000592060 NFAM1Q8NET5 270 aaPredicted RBP14.29□□□□□ -0.12
MBD1-227ENST00000592060 TP53INP1Q96A56 240 aa14.29□□□□□ -0.12
MBD1-227ENST00000592060 ZC3HAV1LQ96H79 300 aaKnown RBP14.29□□□□□ -0.12
MBD1-227ENST00000592060 IER2Q9BTL4 223 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms