RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 KISS1RQ969F8 398 aaPredicted RBP9.89□□□□□ -0.83
SMAD4-211ENST00000590499 SLC38A4Q969I6 547 aa9.89□□□□□ -0.83
SMAD4-211ENST00000590499 TMEM45BQ96B21 275 aa9.89□□□□□ -0.83
SMAD4-211ENST00000590499 APH1AQ96BI3 265 aa9.89□□□□□ -0.83
SMAD4-211ENST00000590499 MBD6Q96DN6 1003 aa9.89□□□□□ -0.83
SMAD4-211ENST00000590499 KTI12Q96EK9 354 aaPredicted RBP9.89□□□□□ -0.83
SMAD4-211ENST00000590499 PIK3IP1Q96FE7 263 aa9.89□□□□□ -0.83
SMAD4-211ENST00000590499 ZNF583Q96ND8 569 aa9.89□□□□□ -0.83
SMAD4-211ENST00000590499 SH3GL1Q99961 368 aa9.89□□□□□ -0.83
SMAD4-211ENST00000590499 NAA11Q9BSU3 229 aaPredicted RBP9.89□□□□□ -0.83
SMAD4-211ENST00000590499 SF3B5Q9BWJ5 86 aaKnown RBP9.89□□□□□ -0.83
SMAD4-211ENST00000590499 CXXC4Q9H2H0 198 aa9.89□□□□□ -0.83
SMAD4-211ENST00000590499 PIF1Q9H611 641 aa9.89□□□□□ -0.83
SMAD4-211ENST00000590499 EVA1AQ9H8M9 152 aa9.89□□□□□ -0.83
SMAD4-211ENST00000590499 MALT1Q9UDY8 824 aa9.89□□□□□ -0.83
SMAD4-211ENST00000590499 ITGB1BP2Q9UKP3 347 aa9.89□□□□□ -0.83
SMAD4-211ENST00000590499 SLC9A8Q9Y2E8 581 aa9.89□□□□□ -0.83
SMAD4-211ENST00000590499 PLEKHA6Q9Y2H5 1048 aa9.89□□□□□ -0.83
SMAD4-211ENST00000590499 NOSIPQ9Y314 301 aaKnown RBP9.89□□□□□ -0.83
SMAD4-211ENST00000590499 FLNAP21333 2647 aaKnown RBP9.89□□□□□ -0.83
SMAD4-211ENST00000590499 A0A087WUJ7 227 aa9.88□□□□□ -0.83
SMAD4-211ENST00000590499 LOC100289279A0A1B0GTE1 492 aa9.88□□□□□ -0.83
SMAD4-211ENST00000590499 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.88□□□□□ -0.83
SMAD4-211ENST00000590499 M0R3H8 397 aa9.88□□□□□ -0.83
SMAD4-211ENST00000590499 AHSA1O95433 338 aa9.88□□□□□ -0.83
SMAD4-211ENST00000590499 PNMTP11086 282 aa9.88□□□□□ -0.83
SMAD4-211ENST00000590499 IL32P24001 234 aa9.88□□□□□ -0.83
SMAD4-211ENST00000590499 SEC24CP53992 1094 aa9.88□□□□□ -0.83
SMAD4-211ENST00000590499 OR1Q1Q15612 314 aa9.88□□□□□ -0.83
SMAD4-211ENST00000590499 TAB1Q15750 504 aa9.88□□□□□ -0.83
SMAD4-211ENST00000590499 MMEL1Q495T6 779 aa9.88□□□□□ -0.83
SMAD4-211ENST00000590499 BEX5Q5H9J7 111 aa9.88□□□□□ -0.83
SMAD4-211ENST00000590499 ALG10BQ5I7T1 473 aa9.88□□□□□ -0.83
SMAD4-211ENST00000590499 INTS11Q5TA45 600 aaKnown RBP9.88□□□□□ -0.83
SMAD4-211ENST00000590499 FBXW9Q5XUX1 488 aa9.88□□□□□ -0.83
SMAD4-211ENST00000590499 FBXW10Q5XX13 1052 aa9.88□□□□□ -0.83
SMAD4-211ENST00000590499 ULK3Q6PHR2 472 aa9.88□□□□□ -0.83
SMAD4-211ENST00000590499 C5orf46Q6UWT4 87 aa9.88□□□□□ -0.83
SMAD4-211ENST00000590499 BHLHA15Q7RTS1 189 aaPredicted RBP9.88□□□□□ -0.83
SMAD4-211ENST00000590499 SPATA21Q7Z572 469 aa9.88□□□□□ -0.83
SMAD4-211ENST00000590499 TSPYL5Q86VY4 417 aaPredicted RBP9.88□□□□□ -0.83
SMAD4-211ENST00000590499 ZDHHC13Q8IUH4 622 aa9.88□□□□□ -0.83
SMAD4-211ENST00000590499 ZNF100Q8IYN0 542 aa9.88□□□□□ -0.83
SMAD4-211ENST00000590499 POU5F2Q8N7G0 328 aa9.88□□□□□ -0.83
SMAD4-211ENST00000590499 PCYOX1LQ8NBM8 494 aa9.88□□□□□ -0.83
SMAD4-211ENST00000590499 OR4D11Q8NGI4 311 aa9.88□□□□□ -0.83
SMAD4-211ENST00000590499 OR6T1Q8NGN1 323 aa9.88□□□□□ -0.83
SMAD4-211ENST00000590499 RP9Q8TA86 221 aaKnown RBP9.88□□□□□ -0.83
SMAD4-211ENST00000590499 RCN3Q96D15 328 aa9.88□□□□□ -0.83
SMAD4-211ENST00000590499 FOXC2Q99958 501 aa9.88□□□□□ -0.83
SMAD4-211ENST00000590499 TMEM204Q9BSN7 226 aa9.88□□□□□ -0.83
SMAD4-211ENST00000590499 TAPBPLQ9BX59 468 aa9.88□□□□□ -0.83
SMAD4-211ENST00000590499 TMPRSS13Q9BYE2 586 aa9.88□□□□□ -0.83
SMAD4-211ENST00000590499 CCM2LQ9NUG4 571 aaPredicted RBP9.88□□□□□ -0.83
SMAD4-211ENST00000590499 ADPRHL2Q9NX46 363 aa9.88□□□□□ -0.83
SMAD4-211ENST00000590499 RPS6KB2Q9UBS0 482 aa9.88□□□□□ -0.83
SMAD4-211ENST00000590499 USP22Q9UPT9 525 aa9.88□□□□□ -0.83
SMAD4-211ENST00000590499 FAM220BPB1ANY3 271 aa9.87□□□□□ -0.83
SMAD4-211ENST00000590499 CCDC22O60826 627 aa9.87□□□□□ -0.83
SMAD4-211ENST00000590499 MRPL33O75394 65 aaKnown RBP9.87□□□□□ -0.83
SMAD4-211ENST00000590499 LYZL6O75951 148 aa9.87□□□□□ -0.83
SMAD4-211ENST00000590499 LYPD3O95274 346 aa9.87□□□□□ -0.83
SMAD4-211ENST00000590499 IGHV3-9P01782 118 aa9.87□□□□□ -0.83
SMAD4-211ENST00000590499 RAF1P04049 648 aa9.87□□□□□ -0.83
SMAD4-211ENST00000590499 CD53P19397 219 aa9.87□□□□□ -0.83
SMAD4-211ENST00000590499 DRD4P21917 467 aa9.87□□□□□ -0.83
SMAD4-211ENST00000590499 DNASE1P24855 282 aa9.87□□□□□ -0.83
SMAD4-211ENST00000590499 RPS5P46782 204 aaKnown RBP9.87□□□□□ -0.83
SMAD4-211ENST00000590499 ART1P52961 327 aa9.87□□□□□ -0.83
SMAD4-211ENST00000590499 CDH12P55289 794 aa9.87□□□□□ -0.83
SMAD4-211ENST00000590499 NCALDP61601 193 aa9.87□□□□□ -0.83
SMAD4-211ENST00000590499 VEZF1Q14119 521 aa9.87□□□□□ -0.83
SMAD4-211ENST00000590499 C8orf82Q6P1X6 216 aaPredicted RBP9.87□□□□□ -0.83
SMAD4-211ENST00000590499 ERICH5Q6P6B1 374 aa9.87□□□□□ -0.83
SMAD4-211ENST00000590499 ZNF613Q6PF04 617 aa9.87□□□□□ -0.83
SMAD4-211ENST00000590499 CASP12Q6UXS9 341 aa9.87□□□□□ -0.83
SMAD4-211ENST00000590499 RANBP3LQ86VV4 465 aaPredicted RBP9.87□□□□□ -0.83
SMAD4-211ENST00000590499 RBM45Q8IUH3 476 aaKnown RBP9.87□□□□□ -0.83
SMAD4-211ENST00000590499 ZNF433Q8N7K0 673 aaPredicted RBP9.87□□□□□ -0.83
SMAD4-211ENST00000590499 TAAR8Q969N4 342 aa9.87□□□□□ -0.83
SMAD4-211ENST00000590499 SLC47A1Q96FL8 570 aa9.87□□□□□ -0.83
SMAD4-211ENST00000590499 ZNF385AQ96PM9 386 aaKnown RBP9.87□□□□□ -0.83
SMAD4-211ENST00000590499 ECSITQ9BQ95 431 aa9.87□□□□□ -0.83
SMAD4-211ENST00000590499 AMBRA1Q9C0C7 1298 aa9.87□□□□□ -0.83
SMAD4-211ENST00000590499 PCDHAC1Q9H158 963 aa9.87□□□□□ -0.83
SMAD4-211ENST00000590499 MYLK2Q9H1R3 596 aa9.87□□□□□ -0.83
SMAD4-211ENST00000590499 GID8Q9NWU2 228 aa9.87□□□□□ -0.83
SMAD4-211ENST00000590499 B3GAT1Q9P2W7 334 aa9.87□□□□□ -0.83
SMAD4-211ENST00000590499 SEC14L4Q9UDX3 406 aa9.87□□□□□ -0.83
SMAD4-211ENST00000590499 SLC13A4Q9UKG4 626 aa9.87□□□□□ -0.83
SMAD4-211ENST00000590499 HIF3AQ9Y2N7 669 aa9.87□□□□□ -0.83
SMAD4-211ENST00000590499 USF3Q68DE3 2245 aa9.87□□□□□ -0.83
SMAD4-211ENST00000590499 TRAV36DV7A0A075B6V5 113 aa9.86□□□□□ -0.83
SMAD4-211ENST00000590499 A0A096LPE4 126 aa9.86□□□□□ -0.83
SMAD4-211ENST00000590499 A0A1W2PPZ6 126 aa9.86□□□□□ -0.83
SMAD4-211ENST00000590499 CCT8L1PA6NM43 557 aa9.86□□□□□ -0.83
SMAD4-211ENST00000590499 OR2T1O43869 369 aa9.86□□□□□ -0.83
SMAD4-211ENST00000590499 SNX3O60493 162 aa9.86□□□□□ -0.83
SMAD4-211ENST00000590499 VAMP5O95183 116 aa9.86□□□□□ -0.83
SMAD4-211ENST00000590499 THY1P04216 161 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms