RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 POLE4Q9NR33 117 aa9.07□□□□□ -0.96
VPS25-202ENST00000589219 IER3IP1Q9Y5U9 82 aa9.07□□□□□ -0.96
VPS25-202ENST00000589219 LOC400499M0QZD8 3231 aa9.07□□□□□ -0.96
VPS25-202ENST00000589219 BAHCC1Q9P281 2608 aa9.06□□□□□ -0.96
VPS25-202ENST00000589219 A0A1W2PQL4 384 aaPredicted RBP9.06□□□□□ -0.96
VPS25-202ENST00000589219 BOLA2-SMG1P6H3BVE0 249 aa9.06□□□□□ -0.96
VPS25-202ENST00000589219 GNB5O14775 395 aa9.06□□□□□ -0.96
VPS25-202ENST00000589219 OIP5O43482 229 aa9.06□□□□□ -0.96
VPS25-202ENST00000589219 MT-CO3P00414 261 aa9.06□□□□□ -0.96
VPS25-202ENST00000589219 CD14P08571 375 aa9.06□□□□□ -0.96
VPS25-202ENST00000589219 ASAH2BP0C7U1 165 aa9.06□□□□□ -0.96
VPS25-202ENST00000589219 PGCP20142 388 aa9.06□□□□□ -0.96
VPS25-202ENST00000589219 SDHAP31040 664 aa9.06□□□□□ -0.96
VPS25-202ENST00000589219 UQCRC1P31930 480 aa9.06□□□□□ -0.96
VPS25-202ENST00000589219 EIF2S3P41091 472 aaKnown RBP9.06□□□□□ -0.96
VPS25-202ENST00000589219 DIO1P49895 249 aa9.06□□□□□ -0.96
VPS25-202ENST00000589219 GBX2P52951 348 aaPredicted RBP9.06□□□□□ -0.96
VPS25-202ENST00000589219 NRG3P56975 720 aa9.06□□□□□ -0.96
VPS25-202ENST00000589219 ZNF117Q03924 483 aa9.06□□□□□ -0.96
VPS25-202ENST00000589219 MRPL28Q13084 256 aaKnown RBP9.06□□□□□ -0.96
VPS25-202ENST00000589219 RIN1Q13671 783 aa9.06□□□□□ -0.96
VPS25-202ENST00000589219 EFR3AQ14156 821 aa9.06□□□□□ -0.96
VPS25-202ENST00000589219 PON3Q15166 354 aa9.06□□□□□ -0.96
VPS25-202ENST00000589219 ZNF79Q15937 498 aa9.06□□□□□ -0.96
VPS25-202ENST00000589219 CDONQ4KMG0 1287 aa9.06□□□□□ -0.96
VPS25-202ENST00000589219 GPR139Q6DWJ6 353 aa9.06□□□□□ -0.96
VPS25-202ENST00000589219 DMKNQ6E0U4 476 aaPredicted RBP9.06□□□□□ -0.96
VPS25-202ENST00000589219 ARL9Q6T311 187 aa9.06□□□□□ -0.96
VPS25-202ENST00000589219 C5orf46Q6UWT4 87 aa9.06□□□□□ -0.96
VPS25-202ENST00000589219 TMEM91Q6ZNR0 172 aa9.06□□□□□ -0.96
VPS25-202ENST00000589219 COX15Q7KZN9 410 aa9.06□□□□□ -0.96
VPS25-202ENST00000589219 NANOGNBQ7Z5D8 188 aa9.06□□□□□ -0.96
VPS25-202ENST00000589219 TPRA1Q86W33 373 aa9.06□□□□□ -0.96
VPS25-202ENST00000589219 OR8H2Q8N162 312 aa9.06□□□□□ -0.96
VPS25-202ENST00000589219 MS4A15Q8N5U1 240 aa9.06□□□□□ -0.96
VPS25-202ENST00000589219 TEX19Q8NA77 164 aa9.06□□□□□ -0.96
VPS25-202ENST00000589219 SNIP1Q8TAD8 396 aaKnown RBP9.06□□□□□ -0.96
VPS25-202ENST00000589219 CHAC2Q8WUX2 184 aa9.06□□□□□ -0.96
VPS25-202ENST00000589219 NAT6Q93015 286 aa9.06□□□□□ -0.96
VPS25-202ENST00000589219 CLIP3Q96DZ5 547 aa9.06□□□□□ -0.96
VPS25-202ENST00000589219 OMA1Q96E52 524 aa9.06□□□□□ -0.96
VPS25-202ENST00000589219 TXNDC15Q96J42 360 aa9.06□□□□□ -0.96
VPS25-202ENST00000589219 DEPDC7Q96QD5 511 aa9.06□□□□□ -0.96
VPS25-202ENST00000589219 ADOQ96SZ5 270 aa9.06□□□□□ -0.96
VPS25-202ENST00000589219 TIMP4Q99727 224 aa9.06□□□□□ -0.96
VPS25-202ENST00000589219 NUDT22Q9BRQ3 303 aa9.06□□□□□ -0.96
VPS25-202ENST00000589219 HDHD5Q9BXW7 423 aa9.06□□□□□ -0.96
VPS25-202ENST00000589219 TBL1XR1Q9BZK7 514 aa9.06□□□□□ -0.96
VPS25-202ENST00000589219 NMNAT2Q9BZQ4 307 aa9.06□□□□□ -0.96
VPS25-202ENST00000589219 SLC7A5P2Q9GIP4 190 aa9.06□□□□□ -0.96
VPS25-202ENST00000589219 TPK1Q9H3S4 243 aa9.06□□□□□ -0.96
VPS25-202ENST00000589219 RERGLQ9H628 205 aa9.06□□□□□ -0.96
VPS25-202ENST00000589219 ISG20L2Q9H9L3 353 aaKnown RBP9.06□□□□□ -0.96
VPS25-202ENST00000589219 MMP25Q9NPA2 562 aa9.06□□□□□ -0.96
VPS25-202ENST00000589219 NANSQ9NR45 359 aa9.06□□□□□ -0.96
VPS25-202ENST00000589219 MKL2Q9ULH7 1088 aa9.06□□□□□ -0.96
VPS25-202ENST00000589219 MOKQ9UQ07 419 aa9.06□□□□□ -0.96
VPS25-202ENST00000589219 GRIP1Q9Y3R0 1128 aa9.06□□□□□ -0.96
VPS25-202ENST00000589219 IGSF10Q6WRI0 2623 aa9.06□□□□□ -0.96
VPS25-202ENST00000589219 TRAV36DV7A0A075B6V5 113 aa9.05□□□□□ -0.96
VPS25-202ENST00000589219 TEX13CA0A0J9YWL9 993 aa9.05□□□□□ -0.96
VPS25-202ENST00000589219 FABP12A6NFH5 140 aa9.05□□□□□ -0.96
VPS25-202ENST00000589219 ANKRD61A6NGH8 418 aa9.05□□□□□ -0.96
VPS25-202ENST00000589219 OR6C70A6NIJ9 312 aa9.05□□□□□ -0.96
VPS25-202ENST00000589219 CD8B2A6NJW9 211 aa9.05□□□□□ -0.96
VPS25-202ENST00000589219 A8MU76 341 aa9.05□□□□□ -0.96
VPS25-202ENST00000589219 J3QLW9 94 aa9.05□□□□□ -0.96
VPS25-202ENST00000589219 HCRTR2O43614 444 aa9.05□□□□□ -0.96
VPS25-202ENST00000589219 NDUFB5O43674 189 aa9.05□□□□□ -0.96
VPS25-202ENST00000589219 GPRIN2O60269 458 aa9.05□□□□□ -0.96
VPS25-202ENST00000589219 GLCEO94923 617 aa9.05□□□□□ -0.96
VPS25-202ENST00000589219 MT-ATP6P00846 226 aa9.05□□□□□ -0.96
VPS25-202ENST00000589219 CLUP10909 449 aa9.05□□□□□ -0.96
VPS25-202ENST00000589219 CD8BP10966 210 aa9.05□□□□□ -0.96
VPS25-202ENST00000589219 GP1BBP13224 206 aa9.05□□□□□ -0.96
VPS25-202ENST00000589219 IL7P13232 177 aa9.05□□□□□ -0.96
VPS25-202ENST00000589219 ZNF19P17023 458 aa9.05□□□□□ -0.96
VPS25-202ENST00000589219 SPI1P17947 270 aa9.05□□□□□ -0.96
VPS25-202ENST00000589219 MST1P26927 711 aa9.05□□□□□ -0.96
VPS25-202ENST00000589219 TACR3P29371 465 aa9.05□□□□□ -0.96
VPS25-202ENST00000589219 NR0B1P51843 470 aaKnown RBP9.05□□□□□ -0.96
VPS25-202ENST00000589219 SUMO3P55854 103 aaPredicted RBP9.05□□□□□ -0.96
VPS25-202ENST00000589219 CLDN6P56747 220 aa9.05□□□□□ -0.96
VPS25-202ENST00000589219 SCN1BQ07699 218 aa9.05□□□□□ -0.96
VPS25-202ENST00000589219 ASAH1Q13510 395 aa9.05□□□□□ -0.96
VPS25-202ENST00000589219 CBFBQ13951 182 aa9.05□□□□□ -0.96
VPS25-202ENST00000589219 CDK5R1Q15078 307 aa9.05□□□□□ -0.96
VPS25-202ENST00000589219 CCDC58Q4VC31 144 aa9.05□□□□□ -0.96
VPS25-202ENST00000589219 ALG10Q5BKT4 473 aa9.05□□□□□ -0.96
VPS25-202ENST00000589219 VWA2Q5GFL6 755 aa9.05□□□□□ -0.96
VPS25-202ENST00000589219 C1orf189Q5VU69 101 aa9.05□□□□□ -0.96
VPS25-202ENST00000589219 HBMQ6B0K9 141 aa9.05□□□□□ -0.96
VPS25-202ENST00000589219 B3GLCTQ6Y288 498 aa9.05□□□□□ -0.96
VPS25-202ENST00000589219 TRILQ7L0X0 811 aa9.05□□□□□ -0.96
VPS25-202ENST00000589219 CADM3Q8N126 398 aa9.05□□□□□ -0.96
VPS25-202ENST00000589219 C10orf53Q8N6V4 93 aa9.05□□□□□ -0.96
VPS25-202ENST00000589219 LRRC75AQ8NAA5 344 aa9.05□□□□□ -0.96
VPS25-202ENST00000589219 LSM14AQ8ND56 463 aaKnown RBP9.05□□□□□ -0.96
VPS25-202ENST00000589219 NPEPL1Q8NDH3 523 aa9.05□□□□□ -0.96
VPS25-202ENST00000589219 OR4D9Q8NGE8 314 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms