RNA–Protein interactions for RNA: ENST00000588300.1

ERCC1-206, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 1,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-206ENST00000588300 SLC35B4Q969S0 331 aa13.86□□□□□ -0.19
ERCC1-206ENST00000588300 VPS33AQ96AX1 596 aa13.86□□□□□ -0.19
ERCC1-206ENST00000588300 SLC25A36Q96CQ1 311 aa13.86□□□□□ -0.19
ERCC1-206ENST00000588300 VRK1Q99986 396 aaPredicted RBP13.86□□□□□ -0.19
ERCC1-206ENST00000588300 RAD21L1Q9H4I0 556 aa13.86□□□□□ -0.19
ERCC1-206ENST00000588300 SDR39U1Q9NRG7 319 aaPredicted RBP13.86□□□□□ -0.19
ERCC1-206ENST00000588300 KCNS2Q9ULS6 477 aa13.86□□□□□ -0.19
ERCC1-206ENST00000588300 RCE1Q9Y256 329 aa13.86□□□□□ -0.19
ERCC1-206ENST00000588300 A0A096LPE4 126 aa13.85□□□□□ -0.19
ERCC1-206ENST00000588300 A0A1W2PPZ6 126 aa13.85□□□□□ -0.19
ERCC1-206ENST00000588300 LOC390937A0A1W2PQ73 354 aa13.85□□□□□ -0.19
ERCC1-206ENST00000588300 FTCDNL1E5RQL4 147 aa13.85□□□□□ -0.19
ERCC1-206ENST00000588300 NR5A2O00482 541 aa13.85□□□□□ -0.19
ERCC1-206ENST00000588300 UBDO15205 165 aa13.85□□□□□ -0.19
ERCC1-206ENST00000588300 UPK3AO75631 287 aa13.85□□□□□ -0.19
ERCC1-206ENST00000588300 OR4A8P0C604 315 aa13.85□□□□□ -0.19
ERCC1-206ENST00000588300 CECR9P0C854 216 aa13.85□□□□□ -0.19
ERCC1-206ENST00000588300 HOXB1P14653 301 aaPredicted RBP13.85□□□□□ -0.19
ERCC1-206ENST00000588300 ZNF43P17038 809 aa13.85□□□□□ -0.19
ERCC1-206ENST00000588300 RPS5P46782 204 aaKnown RBP13.85□□□□□ -0.19
ERCC1-206ENST00000588300 POLR2JP52435 117 aaKnown RBP13.85□□□□□ -0.19
ERCC1-206ENST00000588300 CLDN17P56750 224 aa13.85□□□□□ -0.19
ERCC1-206ENST00000588300 TUBA1BP68363 451 aa13.85□□□□□ -0.19
ERCC1-206ENST00000588300 TUBA4AP68366 448 aa13.85□□□□□ -0.19
ERCC1-206ENST00000588300 ROR2Q01974 943 aaKnown RBP13.85□□□□□ -0.19
ERCC1-206ENST00000588300 EFNB3Q15768 340 aa13.85□□□□□ -0.19
ERCC1-206ENST00000588300 CARTPTQ16568 116 aa13.85□□□□□ -0.19
ERCC1-206ENST00000588300 VHLLQ6RSH7 139 aa13.85□□□□□ -0.19
ERCC1-206ENST00000588300 TUBA1AQ71U36 451 aa13.85□□□□□ -0.19
ERCC1-206ENST00000588300 OR4F15Q8NGB8 312 aa13.85□□□□□ -0.19
ERCC1-206ENST00000588300 BBS10Q8TAM1 723 aa13.85□□□□□ -0.19
ERCC1-206ENST00000588300 PTDSS2Q9BVG9 487 aa13.85□□□□□ -0.19
ERCC1-206ENST00000588300 NELFAQ9H3P2 528 aa13.85□□□□□ -0.19
ERCC1-206ENST00000588300 BCL2L10Q9HD36 194 aa13.85□□□□□ -0.19
ERCC1-206ENST00000588300 RPS6KB2Q9UBS0 482 aa13.85□□□□□ -0.19
ERCC1-206ENST00000588300 FBXO9Q9UK97 447 aaPredicted RBP13.85□□□□□ -0.19
ERCC1-206ENST00000588300 RAB21Q9UL25 225 aa13.85□□□□□ -0.19
ERCC1-206ENST00000588300 MALRD1Q5VYJ5 2156 aa13.85□□□□□ -0.19
ERCC1-206ENST00000588300 SLC43A1O75387 559 aa13.84□□□□□ -0.19
ERCC1-206ENST00000588300 IGLV1-44P01699 117 aa13.84□□□□□ -0.19
ERCC1-206ENST00000588300 APEHP13798 732 aaKnown RBP13.84□□□□□ -0.19
ERCC1-206ENST00000588300 IGFBP5P24593 272 aa13.84□□□□□ -0.19
ERCC1-206ENST00000588300 PPOXP50336 477 aa13.84□□□□□ -0.19
ERCC1-206ENST00000588300 EGR4Q05215 589 aa13.84□□□□□ -0.19
ERCC1-206ENST00000588300 FADDQ13158 208 aa13.84□□□□□ -0.19
ERCC1-206ENST00000588300 RGNQ15493 299 aa13.84□□□□□ -0.19
ERCC1-206ENST00000588300 ADIPOQQ15848 244 aa13.84□□□□□ -0.19
ERCC1-206ENST00000588300 KDM8Q8N371 416 aa13.84□□□□□ -0.19
ERCC1-206ENST00000588300 ARIH2OSQ8N7S6 290 aa13.84□□□□□ -0.19
ERCC1-206ENST00000588300 FAM169BQ8N8A8 192 aa13.84□□□□□ -0.19
ERCC1-206ENST00000588300 ANKS4BQ8N8V4 417 aa13.84□□□□□ -0.19
ERCC1-206ENST00000588300 ANKK1Q8NFD2 765 aa13.84□□□□□ -0.19
ERCC1-206ENST00000588300 OR9I1Q8NGQ6 314 aa13.84□□□□□ -0.19
ERCC1-206ENST00000588300 OXGR1Q96P68 337 aa13.84□□□□□ -0.19
ERCC1-206ENST00000588300 PRR14Q9BWN1 585 aa13.84□□□□□ -0.19
ERCC1-206ENST00000588300 PLK3Q9H4B4 646 aa13.84□□□□□ -0.19
ERCC1-206ENST00000588300 CHODLQ9H9P2 273 aa13.84□□□□□ -0.19
ERCC1-206ENST00000588300 C12orf10Q9HB07 376 aa13.84□□□□□ -0.19
ERCC1-206ENST00000588300 A4GALTQ9NPC4 353 aa13.84□□□□□ -0.19
ERCC1-206ENST00000588300 PCDHB14Q9Y5E9 798 aa13.84□□□□□ -0.19
ERCC1-206ENST00000588300 LOC100289279A0A1B0GTE1 492 aa13.83□□□□□ -0.2
ERCC1-206ENST00000588300 C5orf58C9J3I9 102 aa13.83□□□□□ -0.2
ERCC1-206ENST00000588300 RPL36A-HNRNPH2H7BZ11 118 aa13.83□□□□□ -0.2
ERCC1-206ENST00000588300 CLIC1O00299 241 aa13.83□□□□□ -0.2
ERCC1-206ENST00000588300 AIM2O14862 343 aa13.83□□□□□ -0.2
ERCC1-206ENST00000588300 OR2T1O43869 369 aa13.83□□□□□ -0.2
ERCC1-206ENST00000588300 ZNF432O94892 652 aa13.83□□□□□ -0.2
ERCC1-206ENST00000588300 IGKV3-15P01624 115 aa13.83□□□□□ -0.2
ERCC1-206ENST00000588300 NUDT7P0C024 238 aa13.83□□□□□ -0.2
ERCC1-206ENST00000588300 SRD5A1P18405 259 aa13.83□□□□□ -0.2
ERCC1-206ENST00000588300 CALCRP30988 508 aa13.83□□□□□ -0.2
ERCC1-206ENST00000588300 THBS2P35442 1172 aa13.83□□□□□ -0.2
ERCC1-206ENST00000588300 SLC18A1P54219 525 aa13.83□□□□□ -0.2
ERCC1-206ENST00000588300 ARF1P84077 181 aaKnown RBP13.83□□□□□ -0.2
ERCC1-206ENST00000588300 HOXC5Q00444 222 aa13.83□□□□□ -0.2
ERCC1-206ENST00000588300 C1DQ13901 141 aaKnown RBP13.83□□□□□ -0.2
ERCC1-206ENST00000588300 IQCCQ4KMZ1 466 aa13.83□□□□□ -0.2
ERCC1-206ENST00000588300 C5orf46Q6UWT4 87 aa13.83□□□□□ -0.2
ERCC1-206ENST00000588300 C6orf89Q6UWU4 347 aa13.83□□□□□ -0.2
ERCC1-206ENST00000588300 MAVSQ7Z434 540 aa13.83□□□□□ -0.2
ERCC1-206ENST00000588300 MIER2Q8N344 545 aa13.83□□□□□ -0.2
ERCC1-206ENST00000588300 GPR137CQ8N3F9 429 aa13.83□□□□□ -0.2
ERCC1-206ENST00000588300 ZNF540Q8NDQ6 660 aa13.83□□□□□ -0.2
ERCC1-206ENST00000588300 NUP37Q8NFH4 326 aa13.83□□□□□ -0.2
ERCC1-206ENST00000588300 GTF2H4Q92759 462 aa13.83□□□□□ -0.2
ERCC1-206ENST00000588300 SLC38A4Q969I6 547 aa13.83□□□□□ -0.2
ERCC1-206ENST00000588300 MAL2Q969L2 176 aa13.83□□□□□ -0.2
ERCC1-206ENST00000588300 MSI2Q96DH6 328 aaKnown RBP13.83□□□□□ -0.2
ERCC1-206ENST00000588300 KTI12Q96EK9 354 aaPredicted RBP13.83□□□□□ -0.2
ERCC1-206ENST00000588300 FOXN4Q96NZ1 517 aa13.83□□□□□ -0.2
ERCC1-206ENST00000588300 OR52B2Q96RD2 323 aa13.83□□□□□ -0.2
ERCC1-206ENST00000588300 PAIP1Q9H074 479 aaKnown RBP13.83□□□□□ -0.2
ERCC1-206ENST00000588300 RAB1BQ9H0U4 201 aa13.83□□□□□ -0.2
ERCC1-206ENST00000588300 SEC61A2Q9H9S3 476 aa13.83□□□□□ -0.2
ERCC1-206ENST00000588300 NKIRAS1Q9NYS0 192 aa13.83□□□□□ -0.2
ERCC1-206ENST00000588300 SEC14L4Q9UDX3 406 aa13.83□□□□□ -0.2
ERCC1-206ENST00000588300 IGHV4-61A0A0C4DH41 118 aa13.82□□□□□ -0.2
ERCC1-206ENST00000588300 VSTM5A8MXK1 200 aa13.82□□□□□ -0.2
ERCC1-206ENST00000588300 AKAP8O43823 692 aaKnown RBP13.82□□□□□ -0.2
ERCC1-206ENST00000588300 FZD7O75084 574 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms