RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, human

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBD1-208	ENST00000588009	HECW1	Q76N89	1606 aa		4.14	□□□□□ -1.75
TUBD1-208	ENST00000588009	IGLV8-61	A0A075B6I0	122 aa		4.14	□□□□□ -1.75
TUBD1-208	ENST00000588009	SMCO3	A2RU48	225 aa		4.14	□□□□□ -1.75
TUBD1-208	ENST00000588009	NCF1B	A6NI72	391 aa	Predicted RBP	4.14	□□□□□ -1.75
TUBD1-208	ENST00000588009	OR5B21	A6NL26	309 aa		4.14	□□□□□ -1.75
TUBD1-208	ENST00000588009	NCF1C	A8MVU1	366 aa	Predicted RBP	4.14	□□□□□ -1.75
TUBD1-208	ENST00000588009	DNAJB6	O75190	326 aa		4.14	□□□□□ -1.75
TUBD1-208	ENST00000588009	OR7A10	O76100	309 aa		4.14	□□□□□ -1.75
TUBD1-208	ENST00000588009	LGI1	O95970	557 aa		4.14	□□□□□ -1.75
TUBD1-208	ENST00000588009	FTH1	P02794	183 aa		4.14	□□□□□ -1.75
TUBD1-208	ENST00000588009	SERPIND1	P05546	499 aa		4.14	□□□□□ -1.75
TUBD1-208	ENST00000588009	OR8U8	P0C7N1	319 aa		4.14	□□□□□ -1.75
TUBD1-208	ENST00000588009	GDF1	P27539	372 aa		4.14	□□□□□ -1.75
TUBD1-208	ENST00000588009	HTR1F	P30939	366 aa		4.14	□□□□□ -1.75
TUBD1-208	ENST00000588009	RFC4	P35249	363 aa		4.14	□□□□□ -1.75
TUBD1-208	ENST00000588009	KPNA2	P52292	529 aa	Known RBP	4.14	□□□□□ -1.75
TUBD1-208	ENST00000588009	C21orf59	P57076	290 aa		4.14	□□□□□ -1.75
TUBD1-208	ENST00000588009	RPS15	P62841	145 aa	Known RBP	4.14	□□□□□ -1.75
TUBD1-208	ENST00000588009	KCNJ2	P63252	427 aa		4.14	□□□□□ -1.75
TUBD1-208	ENST00000588009	IL18	Q14116	193 aa		4.14	□□□□□ -1.75
TUBD1-208	ENST00000588009	NSUN5P1	Q3KNT7	163 aa		4.14	□□□□□ -1.75
TUBD1-208	ENST00000588009	HIGD2B	Q4VC39	106 aa		4.14	□□□□□ -1.75
TUBD1-208	ENST00000588009	LRRC74B	Q6ZQY2	392 aa		4.14	□□□□□ -1.75
TUBD1-208	ENST00000588009	FRA10AC1	Q70Z53	315 aa		4.14	□□□□□ -1.75
TUBD1-208	ENST00000588009	CENPQ	Q7L2Z9	268 aa	Predicted RBP	4.14	□□□□□ -1.75
TUBD1-208	ENST00000588009	GDPD3	Q7L5L3	318 aa		4.14	□□□□□ -1.75
TUBD1-208	ENST00000588009	ERI1	Q8IV48	349 aa	Known RBP	4.14	□□□□□ -1.75
TUBD1-208	ENST00000588009	OR7G2	Q8NG99	324 aa		4.14	□□□□□ -1.75
TUBD1-208	ENST00000588009	OR6C4	Q8NGE1	309 aa		4.14	□□□□□ -1.75
TUBD1-208	ENST00000588009	FGF11	Q92914	225 aa		4.14	□□□□□ -1.75
TUBD1-208	ENST00000588009	TECTB	Q96PL2	329 aa		4.14	□□□□□ -1.75
TUBD1-208	ENST00000588009	MRPL45	Q9BRJ2	306 aa	Known RBP	4.14	□□□□□ -1.75
TUBD1-208	ENST00000588009	ILKAP	Q9H0C8	392 aa	Predicted RBP	4.14	□□□□□ -1.75
TUBD1-208	ENST00000588009	FOLH1B	Q9HBA9	442 aa		4.14	□□□□□ -1.75
TUBD1-208	ENST00000588009	PSME2	Q9UL46	239 aa		4.14	□□□□□ -1.75
TUBD1-208	ENST00000588009	UBQLN1	Q9UMX0	589 aa	Known RBP	4.14	□□□□□ -1.75
TUBD1-208	ENST00000588009	FLVCR1	Q9Y5Y0	555 aa		4.14	□□□□□ -1.75
TUBD1-208	ENST00000588009	ATRN	O75882	1429 aa		4.13	□□□□□ -1.75
TUBD1-208	ENST00000588009	GOLGB1	Q14789	3259 aa	Known RBP	4.13	□□□□□ -1.75
TUBD1-208	ENST00000588009	IGHV1OR15-1	A0A075B7D0	117 aa		4.13	□□□□□ -1.75
TUBD1-208	ENST00000588009	IGKV1D-8	A0A087WSZ0	117 aa		4.13	□□□□□ -1.75
TUBD1-208	ENST00000588009		A0A0G2JRQ6	117 aa		4.13	□□□□□ -1.75
TUBD1-208	ENST00000588009	TUBAL3	A6NHL2	446 aa		4.13	□□□□□ -1.75
TUBD1-208	ENST00000588009		H0YC42	278 aa		4.13	□□□□□ -1.75
TUBD1-208	ENST00000588009	WWP2	O00308	870 aa		4.13	□□□□□ -1.75
TUBD1-208	ENST00000588009	PSTPIP1	O43586	416 aa		4.13	□□□□□ -1.75
TUBD1-208	ENST00000588009	RBMY1C	P0DJD4	496 aa		4.13	□□□□□ -1.75
TUBD1-208	ENST00000588009	UGT1A3	P35503	534 aa		4.13	□□□□□ -1.75
TUBD1-208	ENST00000588009	VHL	P40337	213 aa		4.13	□□□□□ -1.75
TUBD1-208	ENST00000588009	PEX19	P40855	299 aa		4.13	□□□□□ -1.75
TUBD1-208	ENST00000588009	MDH2	P40926	338 aa	Known RBP	4.13	□□□□□ -1.75
TUBD1-208	ENST00000588009	RGS8	P57771	180 aa	Predicted RBP	4.13	□□□□□ -1.75
TUBD1-208	ENST00000588009	BCL2L1	Q07817	233 aa		4.13	□□□□□ -1.75
TUBD1-208	ENST00000588009	GNMT	Q14749	295 aa		4.13	□□□□□ -1.75
TUBD1-208	ENST00000588009		Q1RN00	199 aa		4.13	□□□□□ -1.75
TUBD1-208	ENST00000588009	VPS26B	Q4G0F5	336 aa		4.13	□□□□□ -1.75
TUBD1-208	ENST00000588009	KLF17	Q5JT82	389 aa	Predicted RBP	4.13	□□□□□ -1.75
TUBD1-208	ENST00000588009	SAMD4B	Q5PRF9	694 aa	Known RBP	4.13	□□□□□ -1.75
TUBD1-208	ENST00000588009	RNLS	Q5VYX0	342 aa		4.13	□□□□□ -1.75
TUBD1-208	ENST00000588009	WDR74	Q6RFH5	385 aa	Predicted RBP	4.13	□□□□□ -1.75
TUBD1-208	ENST00000588009	ARC	Q7LC44	396 aa		4.13	□□□□□ -1.75
TUBD1-208	ENST00000588009	LUZP2	Q86TE4	346 aa		4.13	□□□□□ -1.75
TUBD1-208	ENST00000588009	FTMT	Q8N4E7	242 aa		4.13	□□□□□ -1.75
TUBD1-208	ENST00000588009	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	4.13	□□□□□ -1.75
TUBD1-208	ENST00000588009	OR2L2	Q8NH16	312 aa		4.13	□□□□□ -1.75
TUBD1-208	ENST00000588009	TSEN15	Q8WW01	171 aa	Known RBP	4.13	□□□□□ -1.75
TUBD1-208	ENST00000588009	SLC38A4	Q969I6	547 aa		4.13	□□□□□ -1.75
TUBD1-208	ENST00000588009	FGGY	Q96C11	551 aa		4.13	□□□□□ -1.75
TUBD1-208	ENST00000588009	VSIG2	Q96IQ7	327 aa		4.13	□□□□□ -1.75
TUBD1-208	ENST00000588009	ATOH8	Q96SQ7	321 aa		4.13	□□□□□ -1.75
TUBD1-208	ENST00000588009	BPIFA3	Q9BQP9	254 aa		4.13	□□□□□ -1.75
TUBD1-208	ENST00000588009	C19orf24	Q9BVV8	132 aa		4.13	□□□□□ -1.75
TUBD1-208	ENST00000588009	ZNF160	Q9HCG1	818 aa		4.13	□□□□□ -1.75
TUBD1-208	ENST00000588009	INPP5E	Q9NRR6	644 aa		4.13	□□□□□ -1.75
TUBD1-208	ENST00000588009	GCNT4	Q9P109	453 aa		4.13	□□□□□ -1.75
TUBD1-208	ENST00000588009	N6AMT1	Q9Y5N5	214 aa		4.13	□□□□□ -1.75
TUBD1-208	ENST00000588009	SH3TC1	Q8TE82	1336 aa		4.13	□□□□□ -1.75
TUBD1-208	ENST00000588009	DNMT1	P26358	1616 aa	Known RBP	4.13	□□□□□ -1.75
TUBD1-208	ENST00000588009	MYOM1	P52179	1685 aa		4.13	□□□□□ -1.75
TUBD1-208	ENST00000588009	DLC1	Q96QB1	1528 aa		4.12	□□□□□ -1.75
TUBD1-208	ENST00000588009	LSM1	O15116	133 aa	Known RBP	4.12	□□□□□ -1.75
TUBD1-208	ENST00000588009	CASC3	O15234	703 aa	Known RBP	4.12	□□□□□ -1.75
TUBD1-208	ENST00000588009	MBTPS2	O43462	519 aa		4.12	□□□□□ -1.75
TUBD1-208	ENST00000588009	C1orf105	O95561	183 aa		4.12	□□□□□ -1.75
TUBD1-208	ENST00000588009	UBTFL1	P0CB47	393 aa	Predicted RBP	4.12	□□□□□ -1.75
TUBD1-208	ENST00000588009	FAS	P25445	335 aa		4.12	□□□□□ -1.75
TUBD1-208	ENST00000588009	NTS	P30990	170 aa		4.12	□□□□□ -1.75
TUBD1-208	ENST00000588009	IFNA8	P32881	189 aa		4.12	□□□□□ -1.75
TUBD1-208	ENST00000588009	GSS	P48637	474 aa		4.12	□□□□□ -1.75
TUBD1-208	ENST00000588009	ACLY	P53396	1101 aa		4.12	□□□□□ -1.75
TUBD1-208	ENST00000588009	TGFBI	Q15582	683 aa		4.12	□□□□□ -1.75
TUBD1-208	ENST00000588009	PAGE2B	Q5JRK9	111 aa		4.12	□□□□□ -1.75
TUBD1-208	ENST00000588009	SLC8B1	Q6J4K2	584 aa		4.12	□□□□□ -1.75
TUBD1-208	ENST00000588009	SLC25A48	Q6ZT89	311 aa	Known RBP	4.12	□□□□□ -1.75
TUBD1-208	ENST00000588009	ACMSD	Q8TDX5	336 aa		4.12	□□□□□ -1.75
TUBD1-208	ENST00000588009	PEX13	Q92968	403 aa		4.12	□□□□□ -1.75
TUBD1-208	ENST00000588009	SLC25A38	Q96DW6	304 aa		4.12	□□□□□ -1.75
TUBD1-208	ENST00000588009	SIGLEC12	Q96PQ1	595 aa		4.12	□□□□□ -1.75
TUBD1-208	ENST00000588009	TGS1	Q96RS0	853 aa	Known RBP	4.12	□□□□□ -1.75
TUBD1-208	ENST00000588009	RIOK1	Q9BRS2	568 aa	Known RBP	4.12	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms