RNA–Protein interactions for RNA: ENST00000585395.6

LSM7-202, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-202ENST00000585395 CD8BP10966 210 aa20.53■□□□□ 0.88
LSM7-202ENST00000585395 ATP6V1B2P21281 511 aa20.53■□□□□ 0.88
LSM7-202ENST00000585395 H3F3AP84243 136 aa20.53■□□□□ 0.88
LSM7-202ENST00000585395 CHRNB3Q05901 458 aa20.53■□□□□ 0.88
LSM7-202ENST00000585395 FLOT2Q14254 428 aa20.53■□□□□ 0.88
LSM7-202ENST00000585395 FAM98BQ52LJ0 330 aaKnown RBP20.53■□□□□ 0.88
LSM7-202ENST00000585395 AQP12AQ8IXF9 295 aa20.53■□□□□ 0.88
LSM7-202ENST00000585395 SCAIQ8N9R8 606 aa20.53■□□□□ 0.88
LSM7-202ENST00000585395 TMEM239Q8WW34 195 aa20.53■□□□□ 0.88
LSM7-202ENST00000585395 PSD2Q9BQI7 771 aa20.53■□□□□ 0.88
LSM7-202ENST00000585395 ZNF426Q9BUY5 554 aa20.53■□□□□ 0.88
LSM7-202ENST00000585395 B3GALT5Q9Y2C3 310 aa20.53■□□□□ 0.88
LSM7-202ENST00000585395 PRRC2AP48634 2157 aaKnown RBP20.53■□□□□ 0.88
LSM7-202ENST00000585395 IGKV3D-15A0A087WSY6 115 aa20.52■□□□□ 0.88
LSM7-202ENST00000585395 AKR7A3O95154 331 aa20.52■□□□□ 0.88
LSM7-202ENST00000585395 LYPD3O95274 346 aa20.52■□□□□ 0.88
LSM7-202ENST00000585395 HIST1H2ABP04908 130 aa20.52■□□□□ 0.88
LSM7-202ENST00000585395 EPXP11678 715 aa20.52■□□□□ 0.88
LSM7-202ENST00000585395 KLK2P20151 261 aa20.52■□□□□ 0.88
LSM7-202ENST00000585395 AGTR1P30556 359 aa20.52■□□□□ 0.88
LSM7-202ENST00000585395 CD79BP40259 229 aa20.52■□□□□ 0.88
LSM7-202ENST00000585395 YAP1P46937 504 aaKnown RBP20.52■□□□□ 0.88
LSM7-202ENST00000585395 SLC16A1P53985 500 aa20.52■□□□□ 0.88
LSM7-202ENST00000585395 IST1P53990 364 aa20.52■□□□□ 0.88
LSM7-202ENST00000585395 GUSBP1Q15486 140 aa20.52■□□□□ 0.88
LSM7-202ENST00000585395 HIST3H2AQ7L7L0 130 aa20.52■□□□□ 0.88
LSM7-202ENST00000585395 GALNT5Q7Z7M9 940 aa20.52■□□□□ 0.88
LSM7-202ENST00000585395 ADPRHL1Q8NDY3 354 aa20.52■□□□□ 0.88
LSM7-202ENST00000585395 HIST1H2ACQ93077 130 aa20.52■□□□□ 0.88
LSM7-202ENST00000585395 TAAR8Q969N4 342 aa20.52■□□□□ 0.88
LSM7-202ENST00000585395 PIP5K1AQ99755 562 aa20.52■□□□□ 0.88
LSM7-202ENST00000585395 PRSS27Q9BQR3 290 aa20.52■□□□□ 0.88
LSM7-202ENST00000585395 PTDSS2Q9BVG9 487 aa20.52■□□□□ 0.88
LSM7-202ENST00000585395 CADM1Q9BY67 442 aaKnown RBP20.52■□□□□ 0.88
LSM7-202ENST00000585395 KRCC1Q9NPI7 259 aaPredicted RBP20.52■□□□□ 0.88
LSM7-202ENST00000585395 ABCA4P78363 2273 aa20.52■□□□□ 0.88
LSM7-202ENST00000585395 SH3D21A4FU49 640 aa20.51■□□□□ 0.87
LSM7-202ENST00000585395 A6NNC1 897 aa20.51■□□□□ 0.87
LSM7-202ENST00000585395 FTCDNL1E5RQL4 147 aa20.51■□□□□ 0.87
LSM7-202ENST00000585395 hCG_2039718K7EN88 272 aa20.51■□□□□ 0.87
LSM7-202ENST00000585395 MT-ND1P03886 318 aa20.51■□□□□ 0.87
LSM7-202ENST00000585395 THY1P04216 161 aa20.51■□□□□ 0.87
LSM7-202ENST00000585395 H1F0P07305 194 aaKnown RBP20.51■□□□□ 0.87
LSM7-202ENST00000585395 UMPSP11172 480 aa20.51■□□□□ 0.87
LSM7-202ENST00000585395 NQO1P15559 274 aaKnown RBP20.51■□□□□ 0.87
LSM7-202ENST00000585395 MS4A2Q01362 244 aa20.51■□□□□ 0.87
LSM7-202ENST00000585395 H1FNTQ75WM6 255 aaPredicted RBP20.51■□□□□ 0.87
LSM7-202ENST00000585395 TUSC5Q8IXB3 177 aa20.51■□□□□ 0.87
LSM7-202ENST00000585395 CDK20Q8IZL9 346 aa20.51■□□□□ 0.87
LSM7-202ENST00000585395 RNF113BQ8IZP6 322 aaKnown RBP20.51■□□□□ 0.87
LSM7-202ENST00000585395 FAM86B1Q8N7N1 296 aa20.51■□□□□ 0.87
LSM7-202ENST00000585395 TMEM99Q8N816 258 aa20.51■□□□□ 0.87
LSM7-202ENST00000585395 ZNF610Q8N9Z0 462 aa20.51■□□□□ 0.87
LSM7-202ENST00000585395 PIK3C3Q8NEB9 887 aa20.51■□□□□ 0.87
LSM7-202ENST00000585395 NINJ1Q92982 152 aa20.51■□□□□ 0.87
LSM7-202ENST00000585395 C7orf34Q96L11 122 aa20.51■□□□□ 0.87
LSM7-202ENST00000585395 SEPHS2Q99611 448 aa20.51■□□□□ 0.87
LSM7-202ENST00000585395 CLEC4MQ9H2X3 399 aaPredicted RBP20.51■□□□□ 0.87
LSM7-202ENST00000585395 C12orf49Q9H741 205 aa20.51■□□□□ 0.87
LSM7-202ENST00000585395 FKRPQ9H9S5 495 aa20.51■□□□□ 0.87
LSM7-202ENST00000585395 IL1RAPQ9NPH3 570 aa20.51■□□□□ 0.87
LSM7-202ENST00000585395 PARPBPQ9NWS1 579 aa20.51■□□□□ 0.87
LSM7-202ENST00000585395 ELOVL5Q9NYP7 299 aa20.51■□□□□ 0.87
LSM7-202ENST00000585395 NDUFAF4Q9P032 175 aa20.51■□□□□ 0.87
LSM7-202ENST00000585395 FLNAP21333 2647 aaKnown RBP20.5■□□□□ 0.87
LSM7-202ENST00000585395 KPNA4O00629 521 aaPredicted RBP20.5■□□□□ 0.87
LSM7-202ENST00000585395 FZD7O75084 574 aa20.5■□□□□ 0.87
LSM7-202ENST00000585395 OR6A2O95222 327 aa20.5■□□□□ 0.87
LSM7-202ENST00000585395 GRPRP30550 384 aa20.5■□□□□ 0.87
LSM7-202ENST00000585395 FAM27E3Q08E93 113 aa20.5■□□□□ 0.87
LSM7-202ENST00000585395 WDR88Q6ZMY6 472 aa20.5■□□□□ 0.87
LSM7-202ENST00000585395 TSPYL5Q86VY4 417 aaPredicted RBP20.5■□□□□ 0.87
LSM7-202ENST00000585395 P3H2Q8IVL5 708 aa20.5■□□□□ 0.87
LSM7-202ENST00000585395 ZDHHC21Q8IVQ6 265 aa20.5■□□□□ 0.87
LSM7-202ENST00000585395 NKAIN4Q8IVV8 208 aa20.5■□□□□ 0.87
LSM7-202ENST00000585395 ACOT11Q8WXI4 607 aaPredicted RBP20.5■□□□□ 0.87
LSM7-202ENST00000585395 SGTBQ96EQ0 304 aa20.5■□□□□ 0.87
LSM7-202ENST00000585395 MED18Q9BUE0 208 aa20.5■□□□□ 0.87
LSM7-202ENST00000585395 NMNAT1Q9HAN9 279 aaPredicted RBP20.5■□□□□ 0.87
LSM7-202ENST00000585395 NANSQ9NR45 359 aa20.5■□□□□ 0.87
LSM7-202ENST00000585395 PLSCR4Q9NRQ2 329 aa20.5■□□□□ 0.87
LSM7-202ENST00000585395 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.5■□□□□ 0.87
LSM7-202ENST00000585395 ZNF229Q9UJW7 825 aa20.5■□□□□ 0.87
LSM7-202ENST00000585395 NOSIPQ9Y314 301 aaKnown RBP20.5■□□□□ 0.87
LSM7-202ENST00000585395 J3KTA2 159 aa20.49■□□□□ 0.87
LSM7-202ENST00000585395 ACOT8O14734 319 aa20.49■□□□□ 0.87
LSM7-202ENST00000585395 AKAP8O43823 692 aaKnown RBP20.49■□□□□ 0.87
LSM7-202ENST00000585395 CTAG2O75638 210 aa20.49■□□□□ 0.87
LSM7-202ENST00000585395 CIB2O75838 187 aa20.49■□□□□ 0.87
LSM7-202ENST00000585395 BGLAPP02818 100 aa20.49■□□□□ 0.87
LSM7-202ENST00000585395 SEMG1P04279 462 aa20.49■□□□□ 0.87
LSM7-202ENST00000585395 VLDLRP98155 873 aa20.49■□□□□ 0.87
LSM7-202ENST00000585395 IL1RL1Q01638 556 aa20.49■□□□□ 0.87
LSM7-202ENST00000585395 PMS2P3Q13401 168 aa20.49■□□□□ 0.87
LSM7-202ENST00000585395 ZNF474Q6S9Z5 364 aaPredicted RBP20.49■□□□□ 0.87
LSM7-202ENST00000585395 ZNF730Q6ZMV8 503 aa20.49■□□□□ 0.87
LSM7-202ENST00000585395 PIWIL3Q7Z3Z3 882 aaKnown RBP20.49■□□□□ 0.87
LSM7-202ENST00000585395 GPAT4Q86UL3 456 aa20.49■□□□□ 0.87
LSM7-202ENST00000585395 CCDC103Q8IW40 242 aa20.49■□□□□ 0.87
LSM7-202ENST00000585395 TMEM255BQ8WV15 326 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms