RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 CSTAP01040 98 aa12.97□□□□□ -0.33
CDK5RAP3-237ENST00000585163 IFNA7P01567 189 aa12.97□□□□□ -0.33
CDK5RAP3-237ENST00000585163 SSTR2P30874 369 aa12.97□□□□□ -0.33
CDK5RAP3-237ENST00000585163 MAGEB1P43366 347 aa12.97□□□□□ -0.33
CDK5RAP3-237ENST00000585163 PTH2RP49190 550 aa12.97□□□□□ -0.33
CDK5RAP3-237ENST00000585163 VEGFCP49767 419 aa12.97□□□□□ -0.33
CDK5RAP3-237ENST00000585163 PSMD4P55036 377 aaKnown RBP12.97□□□□□ -0.33
CDK5RAP3-237ENST00000585163 PRPS1P60891 318 aa12.97□□□□□ -0.33
CDK5RAP3-237ENST00000585163 UBE2IP63279 158 aaKnown RBP12.97□□□□□ -0.33
CDK5RAP3-237ENST00000585163 EXOSC2Q13868 293 aaKnown RBP12.97□□□□□ -0.33
CDK5RAP3-237ENST00000585163 WDR45BQ5MNZ6 344 aa12.97□□□□□ -0.33
CDK5RAP3-237ENST00000585163 NLRC3Q7RTR2 1065 aa12.97□□□□□ -0.33
CDK5RAP3-237ENST00000585163 SFTPA2Q8IWL1 248 aa12.97□□□□□ -0.33
CDK5RAP3-237ENST00000585163 ARHGEF39Q8N4T4 335 aa12.97□□□□□ -0.33
CDK5RAP3-237ENST00000585163 MRI1Q9BV20 369 aa12.97□□□□□ -0.33
CDK5RAP3-237ENST00000585163 RBCK1Q9BYM8 510 aa12.97□□□□□ -0.33
CDK5RAP3-237ENST00000585163 METTL17Q9H7H0 456 aaPredicted RBP12.97□□□□□ -0.33
CDK5RAP3-237ENST00000585163 Q9N2J8 555 aa12.97□□□□□ -0.33
CDK5RAP3-237ENST00000585163 KLK11Q9UBX7 282 aa12.97□□□□□ -0.33
CDK5RAP3-237ENST00000585163 F5P12259 2224 aa12.97□□□□□ -0.33
CDK5RAP3-237ENST00000585163 A0A1B0GUH1 482 aa12.97□□□□□ -0.33
CDK5RAP3-237ENST00000585163 LOC105371267A0A1B0GV96 52 aa12.97□□□□□ -0.33
CDK5RAP3-237ENST00000585163 SERINC4A6NH21 518 aa12.97□□□□□ -0.33
CDK5RAP3-237ENST00000585163 ZSCAN5BA6NJL1 495 aa12.97□□□□□ -0.33
CDK5RAP3-237ENST00000585163 KRT33AO76009 404 aa12.97□□□□□ -0.33
CDK5RAP3-237ENST00000585163 CTSBP07858 339 aa12.97□□□□□ -0.33
CDK5RAP3-237ENST00000585163 CT45A8P0DMV1 189 aa12.97□□□□□ -0.33
CDK5RAP3-237ENST00000585163 CT45A9P0DMV2 189 aa12.97□□□□□ -0.33
CDK5RAP3-237ENST00000585163 M6PRP20645 277 aa12.97□□□□□ -0.33
CDK5RAP3-237ENST00000585163 EPHA4P54764 986 aa12.97□□□□□ -0.33
CDK5RAP3-237ENST00000585163 SRSF5Q13243 272 aaKnown RBP12.97□□□□□ -0.33
CDK5RAP3-237ENST00000585163 CT45A2Q5DJT8 189 aa12.97□□□□□ -0.33
CDK5RAP3-237ENST00000585163 METTL11BQ5VVY1 283 aa12.97□□□□□ -0.33
CDK5RAP3-237ENST00000585163 PWWP2BQ6NUJ5 590 aa12.97□□□□□ -0.33
CDK5RAP3-237ENST00000585163 SERPINA12Q8IW75 414 aa12.97□□□□□ -0.33
CDK5RAP3-237ENST00000585163 FAM71CQ8NEG0 241 aa12.97□□□□□ -0.33
CDK5RAP3-237ENST00000585163 OR4C3Q8NH37 302 aa12.97□□□□□ -0.33
CDK5RAP3-237ENST00000585163 FCAMRQ8WWV6 532 aa12.97□□□□□ -0.33
CDK5RAP3-237ENST00000585163 C3orf49Q96BT1 292 aa12.97□□□□□ -0.33
CDK5RAP3-237ENST00000585163 S100A16Q96FQ6 103 aaKnown RBP12.97□□□□□ -0.33
CDK5RAP3-237ENST00000585163 MAP6Q96JE9 813 aa12.97□□□□□ -0.33
CDK5RAP3-237ENST00000585163 DHRS9Q9BPW9 319 aa12.97□□□□□ -0.33
CDK5RAP3-237ENST00000585163 ALG12Q9BV10 488 aa12.97□□□□□ -0.33
CDK5RAP3-237ENST00000585163 SLC19A3Q9BZV2 496 aa12.97□□□□□ -0.33
CDK5RAP3-237ENST00000585163 FAM60AQ9NP50 221 aa12.97□□□□□ -0.33
CDK5RAP3-237ENST00000585163 NPDC1Q9NQX5 325 aaPredicted RBP12.97□□□□□ -0.33
CDK5RAP3-237ENST00000585163 LRIT1Q9P2V4 623 aa12.97□□□□□ -0.33
CDK5RAP3-237ENST00000585163 HEATR5AQ86XA9 2040 aa12.97□□□□□ -0.33
CDK5RAP3-237ENST00000585163 RPS10-NUDT3A0A1W2PQS6 291 aa12.96□□□□□ -0.33
CDK5RAP3-237ENST00000585163 RAB40ALP0C0E4 278 aa12.96□□□□□ -0.33
CDK5RAP3-237ENST00000585163 GRPRP30550 384 aa12.96□□□□□ -0.33
CDK5RAP3-237ENST00000585163 LCN1P31025 176 aa12.96□□□□□ -0.33
CDK5RAP3-237ENST00000585163 CLDN12P56749 244 aa12.96□□□□□ -0.33
CDK5RAP3-237ENST00000585163 YPEL5P62699 121 aa12.96□□□□□ -0.33
CDK5RAP3-237ENST00000585163 RPL6Q02878 288 aaKnown RBP12.96□□□□□ -0.33
CDK5RAP3-237ENST00000585163 PUDPQ08623 228 aa12.96□□□□□ -0.33
CDK5RAP3-237ENST00000585163 CLLU1Q5K131 121 aa12.96□□□□□ -0.33
CDK5RAP3-237ENST00000585163 SLC6A19Q695T7 634 aa12.96□□□□□ -0.33
CDK5RAP3-237ENST00000585163 Q6ZTK2 550 aa12.96□□□□□ -0.33
CDK5RAP3-237ENST00000585163 RAB40AQ8WXH6 277 aa12.96□□□□□ -0.33
CDK5RAP3-237ENST00000585163 LCORQ96JN0 433 aaPredicted RBP12.96□□□□□ -0.33
CDK5RAP3-237ENST00000585163 MRGPRX1Q96LB2 322 aa12.96□□□□□ -0.33
CDK5RAP3-237ENST00000585163 OR10A4Q9H209 315 aa12.96□□□□□ -0.33
CDK5RAP3-237ENST00000585163 MTIF3Q9H2K0 278 aaKnown RBP12.96□□□□□ -0.33
CDK5RAP3-237ENST00000585163 RXFP3Q9NSD7 469 aa12.96□□□□□ -0.33
CDK5RAP3-237ENST00000585163 WSB2Q9NYS7 404 aaPredicted RBP12.96□□□□□ -0.33
CDK5RAP3-237ENST00000585163 OR5V1Q9UGF6 321 aa12.96□□□□□ -0.33
CDK5RAP3-237ENST00000585163 FOXJ3Q9UPW0 622 aa12.96□□□□□ -0.33
CDK5RAP3-237ENST00000585163 LRP4O75096 1905 aa12.96□□□□□ -0.33
CDK5RAP3-237ENST00000585163 EML5Q05BV3 1969 aa12.96□□□□□ -0.34
CDK5RAP3-237ENST00000585163 A0A1B0GVT2 93 aa12.96□□□□□ -0.34
CDK5RAP3-237ENST00000585163 EGFP01133 1207 aa12.96□□□□□ -0.34
CDK5RAP3-237ENST00000585163 PDGFAP04085 211 aa12.96□□□□□ -0.34
CDK5RAP3-237ENST00000585163 CALCBP10092 127 aa12.96□□□□□ -0.34
CDK5RAP3-237ENST00000585163 CDKN2AP42771 156 aaKnown RBP12.96□□□□□ -0.34
CDK5RAP3-237ENST00000585163 MRPS10P82664 201 aaKnown RBP12.96□□□□□ -0.34
CDK5RAP3-237ENST00000585163 STX4Q12846 297 aa12.96□□□□□ -0.34
CDK5RAP3-237ENST00000585163 GRK1Q15835 563 aa12.96□□□□□ -0.34
CDK5RAP3-237ENST00000585163 DEFB110Q30KQ9 67 aa12.96□□□□□ -0.34
CDK5RAP3-237ENST00000585163 STPG1Q5TH74 334 aa12.96□□□□□ -0.34
CDK5RAP3-237ENST00000585163 LEG1Q6P5S2 330 aa12.96□□□□□ -0.34
CDK5RAP3-237ENST00000585163 APOOLQ6UXV4 268 aa12.96□□□□□ -0.34
CDK5RAP3-237ENST00000585163 LILRB2Q8N423 598 aa12.96□□□□□ -0.34
CDK5RAP3-237ENST00000585163 MOSPD2Q8NHP6 518 aa12.96□□□□□ -0.34
CDK5RAP3-237ENST00000585163 SYNPRQ8TBG9 265 aa12.96□□□□□ -0.34
CDK5RAP3-237ENST00000585163 GPBAR1Q8TDU6 330 aa12.96□□□□□ -0.34
CDK5RAP3-237ENST00000585163 RBP7Q96R05 134 aa12.96□□□□□ -0.34
CDK5RAP3-237ENST00000585163 TSPAN10Q9H1Z9 355 aaPredicted RBP12.96□□□□□ -0.34
CDK5RAP3-237ENST00000585163 IGKV1D-42A0A075B6H8 117 aa12.95□□□□□ -0.34
CDK5RAP3-237ENST00000585163 ANKRD20A5PA0PJZ0 165 aa12.95□□□□□ -0.34
CDK5RAP3-237ENST00000585163 FAM171A2A8MVW0 826 aa12.95□□□□□ -0.34
CDK5RAP3-237ENST00000585163 PRAMEF2O60811 474 aa12.95□□□□□ -0.34
CDK5RAP3-237ENST00000585163 TOXO94900 526 aa12.95□□□□□ -0.34
CDK5RAP3-237ENST00000585163 GPR3P46089 330 aa12.95□□□□□ -0.34
CDK5RAP3-237ENST00000585163 BLVRAP53004 296 aa12.95□□□□□ -0.34
CDK5RAP3-237ENST00000585163 POU4F3Q15319 338 aa12.95□□□□□ -0.34
CDK5RAP3-237ENST00000585163 NNATQ16517 81 aa12.95□□□□□ -0.34
CDK5RAP3-237ENST00000585163 TMEM69Q5SWH9 247 aa12.95□□□□□ -0.34
CDK5RAP3-237ENST00000585163 OLFML2AQ68BL7 652 aa12.95□□□□□ -0.34
CDK5RAP3-237ENST00000585163 STAC2Q6ZMT1 411 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms