RNA–Protein interactions for RNA: ENST00000584525.5

CDK5RAP3-234, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 530 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-234ENST00000584525 TAB1Q15750 504 aa11.59□□□□□ -0.55
CDK5RAP3-234ENST00000584525 SFRP5Q5T4F7 317 aa11.59□□□□□ -0.55
CDK5RAP3-234ENST00000584525 C1orf140Q5VVS0 124 aa11.59□□□□□ -0.55
CDK5RAP3-234ENST00000584525 FAM91A1Q658Y4 838 aa11.59□□□□□ -0.55
CDK5RAP3-234ENST00000584525 DEF8Q6ZN54 512 aa11.59□□□□□ -0.55
CDK5RAP3-234ENST00000584525 NUFIP2Q7Z417 695 aaKnown RBP11.59□□□□□ -0.55
CDK5RAP3-234ENST00000584525 GALNT5Q7Z7M9 940 aa11.59□□□□□ -0.55
CDK5RAP3-234ENST00000584525 ATG4DQ86TL0 474 aaPredicted RBP11.59□□□□□ -0.55
CDK5RAP3-234ENST00000584525 CALHM3Q86XJ0 350 aa11.59□□□□□ -0.55
CDK5RAP3-234ENST00000584525 TUSC5Q8IXB3 177 aa11.59□□□□□ -0.55
CDK5RAP3-234ENST00000584525 ZNF100Q8IYN0 542 aa11.59□□□□□ -0.55
CDK5RAP3-234ENST00000584525 GABRG1Q8N1C3 465 aa11.59□□□□□ -0.55
CDK5RAP3-234ENST00000584525 STK35Q8TDR2 534 aa11.59□□□□□ -0.55
CDK5RAP3-234ENST00000584525 KISS1RQ969F8 398 aaPredicted RBP11.59□□□□□ -0.55
CDK5RAP3-234ENST00000584525 SLC38A4Q969I6 547 aa11.59□□□□□ -0.55
CDK5RAP3-234ENST00000584525 SLC25A36Q96CQ1 311 aa11.59□□□□□ -0.55
CDK5RAP3-234ENST00000584525 ARL5BQ96KC2 179 aa11.59□□□□□ -0.55
CDK5RAP3-234ENST00000584525 ZNF583Q96ND8 569 aa11.59□□□□□ -0.55
CDK5RAP3-234ENST00000584525 ARHGDIGQ99819 225 aa11.59□□□□□ -0.55
CDK5RAP3-234ENST00000584525 POTEKPQ9BYX7 375 aa11.59□□□□□ -0.55
CDK5RAP3-234ENST00000584525 ADAM19Q9H013 955 aa11.59□□□□□ -0.55
CDK5RAP3-234ENST00000584525 GDF2Q9UK05 429 aaPredicted RBP11.59□□□□□ -0.55
CDK5RAP3-234ENST00000584525 TRAPPC4Q9Y296 219 aa11.59□□□□□ -0.55
CDK5RAP3-234ENST00000584525 SH3GLB1Q9Y371 365 aa11.59□□□□□ -0.55
CDK5RAP3-234ENST00000584525 DSCAMO60469 2012 aa11.59□□□□□ -0.55
CDK5RAP3-234ENST00000584525 A0A1B0GWA3 101 aa11.58□□□□□ -0.56
CDK5RAP3-234ENST00000584525 CPSF4LA6NMK7 179 aaKnown RBP11.58□□□□□ -0.56
CDK5RAP3-234ENST00000584525 CXCR6O00574 342 aa11.58□□□□□ -0.56
CDK5RAP3-234ENST00000584525 SMAD9O15198 467 aaKnown RBP11.58□□□□□ -0.56
CDK5RAP3-234ENST00000584525 PHF1O43189 567 aaPredicted RBP11.58□□□□□ -0.56
CDK5RAP3-234ENST00000584525 OR2T1O43869 369 aa11.58□□□□□ -0.56
CDK5RAP3-234ENST00000584525 CYTIPO60759 359 aa11.58□□□□□ -0.56
CDK5RAP3-234ENST00000584525 NDUFS7O75251 213 aa11.58□□□□□ -0.56
CDK5RAP3-234ENST00000584525 GCM2O75603 506 aaPredicted RBP11.58□□□□□ -0.56
CDK5RAP3-234ENST00000584525 LGI1O95970 557 aa11.58□□□□□ -0.56
CDK5RAP3-234ENST00000584525 ADAP00813 363 aa11.58□□□□□ -0.56
CDK5RAP3-234ENST00000584525 GSK3BP49841 420 aa11.58□□□□□ -0.56
CDK5RAP3-234ENST00000584525 TAS2R41P59536 307 aa11.58□□□□□ -0.56
CDK5RAP3-234ENST00000584525 BSPH1Q075Z2 132 aa11.58□□□□□ -0.56
CDK5RAP3-234ENST00000584525 DUSP7Q16829 419 aa11.58□□□□□ -0.56
CDK5RAP3-234ENST00000584525 PGGHGQ32M88 737 aa11.58□□□□□ -0.56
CDK5RAP3-234ENST00000584525 CYBRD1Q53TN4 286 aa11.58□□□□□ -0.56
CDK5RAP3-234ENST00000584525 OTUD3Q5T2D3 398 aaPredicted RBP11.58□□□□□ -0.56
CDK5RAP3-234ENST00000584525 TMEM225Q6GV28 225 aa11.58□□□□□ -0.56
CDK5RAP3-234ENST00000584525 TFAP2EQ6VUC0 442 aa11.58□□□□□ -0.56
CDK5RAP3-234ENST00000584525 FKBP9P1Q75LS8 142 aa11.58□□□□□ -0.56
CDK5RAP3-234ENST00000584525 CCDC80Q76M96 950 aa11.58□□□□□ -0.56
CDK5RAP3-234ENST00000584525 GPAT4Q86UL3 456 aa11.58□□□□□ -0.56
CDK5RAP3-234ENST00000584525 CARM1Q86X55 608 aa11.58□□□□□ -0.56
CDK5RAP3-234ENST00000584525 SLC15A3Q8IY34 581 aa11.58□□□□□ -0.56
CDK5RAP3-234ENST00000584525 UBE2J2Q8N2K1 259 aa11.58□□□□□ -0.56
CDK5RAP3-234ENST00000584525 LSMEM1Q8N8F7 131 aa11.58□□□□□ -0.56
CDK5RAP3-234ENST00000584525 KBTBD8Q8NFY9 601 aa11.58□□□□□ -0.56
CDK5RAP3-234ENST00000584525 BCAS4Q8TDM0 211 aa11.58□□□□□ -0.56
CDK5RAP3-234ENST00000584525 TAMM41Q96BW9 452 aa11.58□□□□□ -0.56
CDK5RAP3-234ENST00000584525 ZNF524Q96C55 264 aa11.58□□□□□ -0.56
CDK5RAP3-234ENST00000584525 RHNO1Q9BSD3 238 aa11.58□□□□□ -0.56
CDK5RAP3-234ENST00000584525 BARX1Q9HBU1 254 aaPredicted RBP11.58□□□□□ -0.56
CDK5RAP3-234ENST00000584525 CMTM6Q9NX76 183 aa11.58□□□□□ -0.56
CDK5RAP3-234ENST00000584525 NOSIPQ9Y314 301 aaKnown RBP11.58□□□□□ -0.56
CDK5RAP3-234ENST00000584525 CHST2Q9Y4C5 530 aa11.58□□□□□ -0.56
CDK5RAP3-234ENST00000584525 NBEAL1Q6ZS30 2694 aa11.58□□□□□ -0.56
CDK5RAP3-234ENST00000584525 CUBNO60494 3623 aa11.58□□□□□ -0.56
CDK5RAP3-234ENST00000584525 DPRXA6NFQ7 191 aa11.57□□□□□ -0.56
CDK5RAP3-234ENST00000584525 NME4O00746 187 aa11.57□□□□□ -0.56
CDK5RAP3-234ENST00000584525 SSX4O60224 188 aa11.57□□□□□ -0.56
CDK5RAP3-234ENST00000584525 FMO6PO60774 539 aa11.57□□□□□ -0.56
CDK5RAP3-234ENST00000584525 STAMBPO95630 424 aa11.57□□□□□ -0.56
CDK5RAP3-234ENST00000584525 NQO1P15559 274 aaKnown RBP11.57□□□□□ -0.56
CDK5RAP3-234ENST00000584525 HTR2AP28223 471 aa11.57□□□□□ -0.56
CDK5RAP3-234ENST00000584525 KDELR2P33947 212 aa11.57□□□□□ -0.56
CDK5RAP3-234ENST00000584525 RPS5P46782 204 aaKnown RBP11.57□□□□□ -0.56
CDK5RAP3-234ENST00000584525 STK11Q15831 433 aa11.57□□□□□ -0.56
CDK5RAP3-234ENST00000584525 NRF1Q16656 503 aa11.57□□□□□ -0.56
CDK5RAP3-234ENST00000584525 ENTPD8Q5MY95 495 aa11.57□□□□□ -0.56
CDK5RAP3-234ENST00000584525 SWT1Q5T5J6 900 aaKnown RBP11.57□□□□□ -0.56
CDK5RAP3-234ENST00000584525 ZNF613Q6PF04 617 aa11.57□□□□□ -0.56
CDK5RAP3-234ENST00000584525 TTC33Q6PID6 262 aaPredicted RBP11.57□□□□□ -0.56
CDK5RAP3-234ENST00000584525 PIP4P2Q8N4L2 257 aa11.57□□□□□ -0.56
CDK5RAP3-234ENST00000584525 ZNF775Q96BV0 537 aaPredicted RBP11.57□□□□□ -0.56
CDK5RAP3-234ENST00000584525 USB1Q9BQ65 265 aaKnown RBP11.57□□□□□ -0.56
CDK5RAP3-234ENST00000584525 PSD2Q9BQI7 771 aa11.57□□□□□ -0.56
CDK5RAP3-234ENST00000584525 TRAF4Q9BUZ4 470 aaPredicted RBP11.57□□□□□ -0.56
CDK5RAP3-234ENST00000584525 CISD1Q9NZ45 108 aaKnown RBP11.57□□□□□ -0.56
CDK5RAP3-234ENST00000584525 RPS6KA6Q9UK32 745 aa11.57□□□□□ -0.56
CDK5RAP3-234ENST00000584525 USP22Q9UPT9 525 aa11.57□□□□□ -0.56
CDK5RAP3-234ENST00000584525 RAI1Q7Z5J4 1906 aaPredicted RBP11.56□□□□□ -0.56
CDK5RAP3-234ENST00000584525 TRAV36DV7A0A075B6V5 113 aa11.56□□□□□ -0.56
CDK5RAP3-234ENST00000584525 ZC3H12DA2A288 527 aaKnown RBP11.56□□□□□ -0.56
CDK5RAP3-234ENST00000584525 TRAPPC13A5PLN9 417 aa11.56□□□□□ -0.56
CDK5RAP3-234ENST00000584525 ZNF724A8MTY0 619 aa11.56□□□□□ -0.56
CDK5RAP3-234ENST00000584525 CHP2O43745 196 aa11.56□□□□□ -0.56
CDK5RAP3-234ENST00000584525 GPRIN2O60269 458 aa11.56□□□□□ -0.56
CDK5RAP3-234ENST00000584525 RAMP1O60894 148 aa11.56□□□□□ -0.56
CDK5RAP3-234ENST00000584525 MRPL33O75394 65 aaKnown RBP11.56□□□□□ -0.56
CDK5RAP3-234ENST00000584525 KRT33AO76009 404 aa11.56□□□□□ -0.56
CDK5RAP3-234ENST00000584525 AKR7A3O95154 331 aa11.56□□□□□ -0.56
CDK5RAP3-234ENST00000584525 VAMP5O95183 116 aa11.56□□□□□ -0.56
CDK5RAP3-234ENST00000584525 CD8AP01732 235 aa11.56□□□□□ -0.56
CDK5RAP3-234ENST00000584525 IFNW1P05000 195 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms