RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-221	ENST00000583080	FBXO9	Q9UK97	447 aa	Predicted RBP	13.94	□□□□□ -0.18
SREBF1-221	ENST00000583080	RASD1	Q9Y272	281 aa		13.94	□□□□□ -0.18
SREBF1-221	ENST00000583080	FAM157A	C9JC47	383 aa		13.93	□□□□□ -0.18
SREBF1-221	ENST00000583080	FTCDNL1	E5RQL4	147 aa		13.93	□□□□□ -0.18
SREBF1-221	ENST00000583080	ZNF432	O94892	652 aa		13.93	□□□□□ -0.18
SREBF1-221	ENST00000583080	VAMP5	O95183	116 aa		13.93	□□□□□ -0.18
SREBF1-221	ENST00000583080	PNMT	P11086	282 aa		13.93	□□□□□ -0.18
SREBF1-221	ENST00000583080	S100A3	P33764	101 aa		13.93	□□□□□ -0.18
SREBF1-221	ENST00000583080	CLNS1A	P54105	237 aa	Known RBP	13.93	□□□□□ -0.18
SREBF1-221	ENST00000583080	ACTG1	P63261	375 aa		13.93	□□□□□ -0.18
SREBF1-221	ENST00000583080	DAG1	Q14118	895 aa		13.93	□□□□□ -0.18
SREBF1-221	ENST00000583080	DPY19L1	Q2PZI1	675 aa		13.93	□□□□□ -0.18
SREBF1-221	ENST00000583080	GLCCI1	Q86VQ1	547 aa		13.93	□□□□□ -0.18
SREBF1-221	ENST00000583080	PEX5L	Q8IYB4	626 aa		13.93	□□□□□ -0.18
SREBF1-221	ENST00000583080	ZNF440	Q8IYI8	595 aa		13.93	□□□□□ -0.18
SREBF1-221	ENST00000583080	RIBC1	Q8N443	379 aa	Predicted RBP	13.93	□□□□□ -0.18
SREBF1-221	ENST00000583080	EIF1AD	Q8N9N8	165 aa	Known RBP	13.93	□□□□□ -0.18
SREBF1-221	ENST00000583080	CLDND2	Q8NHS1	167 aa		13.93	□□□□□ -0.18
SREBF1-221	ENST00000583080	PANX1	Q96RD7	426 aa		13.93	□□□□□ -0.18
SREBF1-221	ENST00000583080	PTDSS2	Q9BVG9	487 aa		13.93	□□□□□ -0.18
SREBF1-221	ENST00000583080	C20orf27	Q9GZN8	174 aa		13.93	□□□□□ -0.18
SREBF1-221	ENST00000583080	GPR35	Q9HC97	309 aa		13.93	□□□□□ -0.18
SREBF1-221	ENST00000583080	B3GAT1	Q9P2W7	334 aa		13.93	□□□□□ -0.18
SREBF1-221	ENST00000583080	CHST2	Q9Y4C5	530 aa		13.93	□□□□□ -0.18
SREBF1-221	ENST00000583080	DSPP	Q9NZW4	1301 aa		13.92	□□□□□ -0.18
SREBF1-221	ENST00000583080	WDR91	A4D1P6	747 aa		13.92	□□□□□ -0.18
SREBF1-221	ENST00000583080		B4DSR2	109 aa		13.92	□□□□□ -0.18
SREBF1-221	ENST00000583080	RPL36A-HNRNPH2	H7BZ11	118 aa		13.92	□□□□□ -0.18
SREBF1-221	ENST00000583080	WNT9B	O14905	357 aa		13.92	□□□□□ -0.18
SREBF1-221	ENST00000583080	TFPT	P0C1Z6	253 aa		13.92	□□□□□ -0.18
SREBF1-221	ENST00000583080	HOXB1	P14653	301 aa	Predicted RBP	13.92	□□□□□ -0.18
SREBF1-221	ENST00000583080	EGR1	P18146	543 aa		13.92	□□□□□ -0.18
SREBF1-221	ENST00000583080	PCMT1	P22061	227 aa		13.92	□□□□□ -0.18
SREBF1-221	ENST00000583080	IL12A	P29459	219 aa		13.92	□□□□□ -0.18
SREBF1-221	ENST00000583080	CEACAM16	Q2WEN9	425 aa		13.92	□□□□□ -0.18
SREBF1-221	ENST00000583080	LIN52	Q52LA3	116 aa		13.92	□□□□□ -0.18
SREBF1-221	ENST00000583080	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	13.92	□□□□□ -0.18
SREBF1-221	ENST00000583080	ELFN2	Q5R3F8	820 aa		13.92	□□□□□ -0.18
SREBF1-221	ENST00000583080	DEF8	Q6ZN54	512 aa		13.92	□□□□□ -0.18
SREBF1-221	ENST00000583080	CLIP4	Q8N3C7	705 aa		13.92	□□□□□ -0.18
SREBF1-221	ENST00000583080	OR52P1P	Q8NH57	321 aa		13.92	□□□□□ -0.18
SREBF1-221	ENST00000583080	KIF18A	Q8NI77	898 aa		13.92	□□□□□ -0.18
SREBF1-221	ENST00000583080	ZFAND2B	Q8WV99	257 aa		13.92	□□□□□ -0.18
SREBF1-221	ENST00000583080	SLC25A36	Q96CQ1	311 aa		13.92	□□□□□ -0.18
SREBF1-221	ENST00000583080	MRPL37	Q9BZE1	423 aa	Known RBP	13.92	□□□□□ -0.18
SREBF1-221	ENST00000583080	CRLF2	Q9HC73	371 aa		13.92	□□□□□ -0.18
SREBF1-221	ENST00000583080	MOV10	Q9HCE1	1003 aa	Known RBP	13.92	□□□□□ -0.18
SREBF1-221	ENST00000583080	HIF1AN	Q9NWT6	349 aa		13.92	□□□□□ -0.18
SREBF1-221	ENST00000583080	RCE1	Q9Y256	329 aa		13.92	□□□□□ -0.18
SREBF1-221	ENST00000583080	ZNF443	Q9Y2A4	671 aa	Predicted RBP	13.92	□□□□□ -0.18
SREBF1-221	ENST00000583080	KCNAB3	O43448	404 aa		13.91	□□□□□ -0.18
SREBF1-221	ENST00000583080	TYROBP	O43914	113 aa		13.91	□□□□□ -0.18
SREBF1-221	ENST00000583080	AHSA1	O95433	338 aa		13.91	□□□□□ -0.18
SREBF1-221	ENST00000583080	HPX	P02790	462 aa		13.91	□□□□□ -0.18
SREBF1-221	ENST00000583080	ALDOC	P09972	364 aa	Known RBP	13.91	□□□□□ -0.18
SREBF1-221	ENST00000583080	NCF2	P19878	526 aa	Predicted RBP	13.91	□□□□□ -0.18
SREBF1-221	ENST00000583080	TCN1	P20061	433 aa	Predicted RBP	13.91	□□□□□ -0.18
SREBF1-221	ENST00000583080	ARR3	P36575	388 aa		13.91	□□□□□ -0.18
SREBF1-221	ENST00000583080	RPS5	P46782	204 aa	Known RBP	13.91	□□□□□ -0.18
SREBF1-221	ENST00000583080	CAPZA2	P47755	286 aa		13.91	□□□□□ -0.18
SREBF1-221	ENST00000583080	COPZ1	P61923	177 aa		13.91	□□□□□ -0.18
SREBF1-221	ENST00000583080	UFM1	P61960	85 aa		13.91	□□□□□ -0.18
SREBF1-221	ENST00000583080	EGR4	Q05215	589 aa		13.91	□□□□□ -0.18
SREBF1-221	ENST00000583080	CHI3L2	Q15782	390 aa		13.91	□□□□□ -0.18
SREBF1-221	ENST00000583080	PHYHD1	Q5SRE7	291 aa		13.91	□□□□□ -0.18
SREBF1-221	ENST00000583080	ATG16L1	Q676U5	607 aa		13.91	□□□□□ -0.18
SREBF1-221	ENST00000583080	THSD4	Q6ZMP0	1018 aa		13.91	□□□□□ -0.18
SREBF1-221	ENST00000583080	ZNF621	Q6ZSS3	439 aa		13.91	□□□□□ -0.18
SREBF1-221	ENST00000583080	SERPINA11	Q86U17	422 aa		13.91	□□□□□ -0.18
SREBF1-221	ENST00000583080	NUDCD3	Q8IVD9	361 aa		13.91	□□□□□ -0.18
SREBF1-221	ENST00000583080	TRIML2	Q8N7C3	387 aa		13.91	□□□□□ -0.18
SREBF1-221	ENST00000583080	MRPL24	Q96A35	216 aa	Known RBP	13.91	□□□□□ -0.18
SREBF1-221	ENST00000583080	TMEM186	Q96B77	213 aa		13.91	□□□□□ -0.18
SREBF1-221	ENST00000583080	MS4A3	Q96HJ5	214 aa		13.91	□□□□□ -0.18
SREBF1-221	ENST00000583080	SORT1	Q99523	831 aa		13.91	□□□□□ -0.18
SREBF1-221	ENST00000583080	NUF2	Q9BZD4	464 aa		13.91	□□□□□ -0.18
SREBF1-221	ENST00000583080	SLC6A13	Q9NSD5	602 aa		13.91	□□□□□ -0.18
SREBF1-221	ENST00000583080	SPEF1	Q9Y4P9	236 aa		13.91	□□□□□ -0.18
SREBF1-221	ENST00000583080		A0A096LPI6	279 aa		13.9	□□□□□ -0.18
SREBF1-221	ENST00000583080		A0A0A6YYJ9	748 aa		13.9	□□□□□ -0.18
SREBF1-221	ENST00000583080	VSTM5	A8MXK1	200 aa		13.9	□□□□□ -0.18
SREBF1-221	ENST00000583080	SLCO1B7	G3V0H7	640 aa		13.9	□□□□□ -0.18
SREBF1-221	ENST00000583080		M0R233	179 aa		13.9	□□□□□ -0.18
SREBF1-221	ENST00000583080	SLC43A1	O75387	559 aa		13.9	□□□□□ -0.18
SREBF1-221	ENST00000583080	SERPINE1	P05121	402 aa		13.9	□□□□□ -0.18
SREBF1-221	ENST00000583080	BCHE	P06276	602 aa		13.9	□□□□□ -0.18
SREBF1-221	ENST00000583080	MYZAP	P0CAP1	466 aa		13.9	□□□□□ -0.18
SREBF1-221	ENST00000583080	SAG	P10523	405 aa	Predicted RBP	13.9	□□□□□ -0.18
SREBF1-221	ENST00000583080	ZNF43	P17038	809 aa		13.9	□□□□□ -0.18
SREBF1-221	ENST00000583080	LBP	P18428	481 aa		13.9	□□□□□ -0.18
SREBF1-221	ENST00000583080	NR4A1	P22736	598 aa		13.9	□□□□□ -0.18
SREBF1-221	ENST00000583080	COL8A2	P25067	703 aa		13.9	□□□□□ -0.18
SREBF1-221	ENST00000583080	GPR6	P46095	362 aa	Predicted RBP	13.9	□□□□□ -0.18
SREBF1-221	ENST00000583080	COMP	P49747	757 aa	Predicted RBP	13.9	□□□□□ -0.18
SREBF1-221	ENST00000583080	ANXA11	P50995	505 aa	Known RBP	13.9	□□□□□ -0.18
SREBF1-221	ENST00000583080	MVD	P53602	400 aa		13.9	□□□□□ -0.18
SREBF1-221	ENST00000583080	ABCE1	P61221	599 aa	Known RBP	13.9	□□□□□ -0.18
SREBF1-221	ENST00000583080	TXNL4A	P83876	142 aa	Known RBP	13.9	□□□□□ -0.18
SREBF1-221	ENST00000583080	HOXC5	Q00444	222 aa		13.9	□□□□□ -0.18
SREBF1-221	ENST00000583080	POU3F1	Q03052	451 aa	Predicted RBP	13.9	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms