RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 OR4N2Q8NGD1 307 aa9.26□□□□□ -0.93
SS18-221ENST00000582448 SLC7A13Q8TCU3 470 aa9.26□□□□□ -0.93
SS18-221ENST00000582448 GNPDA2Q8TDQ7 276 aa9.26□□□□□ -0.93
SS18-221ENST00000582448 ADAMTS16Q8TE57 1224 aa9.26□□□□□ -0.93
SS18-221ENST00000582448 THAP3Q8WTV1 239 aaPredicted RBP9.26□□□□□ -0.93
SS18-221ENST00000582448 ACOT11Q8WXI4 607 aaPredicted RBP9.26□□□□□ -0.93
SS18-221ENST00000582448 VMP1Q96GC9 406 aa9.26□□□□□ -0.93
SS18-221ENST00000582448 IMMP1LQ96LU5 166 aa9.26□□□□□ -0.93
SS18-221ENST00000582448 HS6ST2Q96MM7 605 aa9.26□□□□□ -0.93
SS18-221ENST00000582448 PITX2Q99697 317 aa9.26□□□□□ -0.93
SS18-221ENST00000582448 UTP23Q9BRU9 249 aaKnown RBP9.26□□□□□ -0.93
SS18-221ENST00000582448 FAM192AQ9GZU8 254 aa9.26□□□□□ -0.93
SS18-221ENST00000582448 WWTR1Q9GZV5 400 aa9.26□□□□□ -0.93
SS18-221ENST00000582448 CTPS2Q9NRF8 586 aa9.26□□□□□ -0.93
SS18-221ENST00000582448 COQ3Q9NZJ6 369 aa9.26□□□□□ -0.93
SS18-221ENST00000582448 PFDN2Q9UHV9 154 aa9.26□□□□□ -0.93
SS18-221ENST00000582448 NDRG4Q9ULP0 352 aaKnown RBP9.26□□□□□ -0.93
SS18-221ENST00000582448 DTX4Q9Y2E6 619 aa9.26□□□□□ -0.93
SS18-221ENST00000582448 ZNF835Q9Y2P0 537 aa9.26□□□□□ -0.93
SS18-221ENST00000582448 SNX5Q9Y5X3 404 aa9.26□□□□□ -0.93
SS18-221ENST00000582448 LOC102723996A0A087X1L8 192 aa9.25□□□□□ -0.93
SS18-221ENST00000582448 NPIPA5A0A0B4J1W7 369 aa9.25□□□□□ -0.93
SS18-221ENST00000582448 SAGE2PA6NJ88 616 aa9.25□□□□□ -0.93
SS18-221ENST00000582448 CLDN24A6NM45 220 aa9.25□□□□□ -0.93
SS18-221ENST00000582448 NPIPA7E9PJI5 369 aa9.25□□□□□ -0.93
SS18-221ENST00000582448 TO15178 435 aa9.25□□□□□ -0.93
SS18-221ENST00000582448 UTS2O95399 124 aa9.25□□□□□ -0.93
SS18-221ENST00000582448 ANGPTL1O95841 491 aa9.25□□□□□ -0.93
SS18-221ENST00000582448 NPIPA8P0DM63 369 aa9.25□□□□□ -0.93
SS18-221ENST00000582448 THBS2P35442 1172 aa9.25□□□□□ -0.93
SS18-221ENST00000582448 IDH2P48735 452 aaKnown RBP9.25□□□□□ -0.93
SS18-221ENST00000582448 NR0B1P51843 470 aaKnown RBP9.25□□□□□ -0.93
SS18-221ENST00000582448 EFNA3P52797 238 aa9.25□□□□□ -0.93
SS18-221ENST00000582448 CRISP1P54107 249 aa9.25□□□□□ -0.93
SS18-221ENST00000582448 GABARAPL2P60520 117 aa9.25□□□□□ -0.93
SS18-221ENST00000582448 CD47Q08722 323 aa9.25□□□□□ -0.93
SS18-221ENST00000582448 EBPQ15125 230 aaKnown RBP9.25□□□□□ -0.93
SS18-221ENST00000582448 OR1Q1Q15612 314 aa9.25□□□□□ -0.93
SS18-221ENST00000582448 MEP1AQ16819 746 aa9.25□□□□□ -0.93
SS18-221ENST00000582448 C6orf141Q5SZD1 244 aa9.25□□□□□ -0.93
SS18-221ENST00000582448 ZNF770Q6IQ21 691 aaPredicted RBP9.25□□□□□ -0.93
SS18-221ENST00000582448 PGBD2Q6P3X8 592 aa9.25□□□□□ -0.93
SS18-221ENST00000582448 PAPD4Q6PIY7 484 aaKnown RBP9.25□□□□□ -0.93
SS18-221ENST00000582448 TMEM205Q6UW68 189 aa9.25□□□□□ -0.93
SS18-221ENST00000582448 CASP12Q6UXS9 341 aa9.25□□□□□ -0.93
SS18-221ENST00000582448 Q6ZPB1 254 aaPredicted RBP9.25□□□□□ -0.93
SS18-221ENST00000582448 MBOAT2Q6ZWT7 520 aa9.25□□□□□ -0.93
SS18-221ENST00000582448 CPEB2Q7Z5Q1 589 aaKnown RBP9.25□□□□□ -0.93
SS18-221ENST00000582448 COMTD1Q86VU5 262 aa9.25□□□□□ -0.93
SS18-221ENST00000582448 DOLPP1Q86YN1 238 aa9.25□□□□□ -0.93
SS18-221ENST00000582448 RNF113BQ8IZP6 322 aaKnown RBP9.25□□□□□ -0.93
SS18-221ENST00000582448 GHDCQ8N2G8 530 aa9.25□□□□□ -0.93
SS18-221ENST00000582448 FAM98AQ8NCA5 519 aaKnown RBP9.25□□□□□ -0.93
SS18-221ENST00000582448 FAM81AQ8TBF8 368 aa9.25□□□□□ -0.93
SS18-221ENST00000582448 EFHD2Q96C19 240 aaPredicted RBP9.25□□□□□ -0.93
SS18-221ENST00000582448 MPP4Q96JB8 637 aa9.25□□□□□ -0.93
SS18-221ENST00000582448 NIPSNAP1Q9BPW8 284 aa9.25□□□□□ -0.93
SS18-221ENST00000582448 ENKD1Q9H0I2 346 aa9.25□□□□□ -0.93
SS18-221ENST00000582448 NXF5Q9H1B4 397 aaKnown RBP9.25□□□□□ -0.93
SS18-221ENST00000582448 CCNB1IP1Q9NPC3 277 aa9.25□□□□□ -0.93
SS18-221ENST00000582448 SLC7A7Q9UM01 511 aa9.25□□□□□ -0.93
SS18-221ENST00000582448 TMEM5Q9Y2B1 443 aa9.25□□□□□ -0.93
SS18-221ENST00000582448 NUP214P35658 2090 aaPredicted RBP9.24□□□□□ -0.93
SS18-221ENST00000582448 SMIM31A0A1B0GVY4 71 aa9.24□□□□□ -0.93
SS18-221ENST00000582448 FAM90A27PA6NNH2 459 aa9.24□□□□□ -0.93
SS18-221ENST00000582448 IGKV1D-16P01601 117 aa9.24□□□□□ -0.93
SS18-221ENST00000582448 CLPSP04118 112 aa9.24□□□□□ -0.93
SS18-221ENST00000582448 CCDC159P0C7I6 412 aa9.24□□□□□ -0.93
SS18-221ENST00000582448 GKN3PP0CG01 181 aa9.24□□□□□ -0.93
SS18-221ENST00000582448 UBL4AP11441 157 aa9.24□□□□□ -0.93
SS18-221ENST00000582448 TBXA2RP21731 343 aa9.24□□□□□ -0.93
SS18-221ENST00000582448 ELK4P28324 431 aa9.24□□□□□ -0.93
SS18-221ENST00000582448 POLR2IP36954 125 aaKnown RBP9.24□□□□□ -0.93
SS18-221ENST00000582448 TMED10P49755 219 aaKnown RBP9.24□□□□□ -0.93
SS18-221ENST00000582448 HLCSP50747 726 aa9.24□□□□□ -0.93
SS18-221ENST00000582448 GPR143P51810 404 aa9.24□□□□□ -0.93
SS18-221ENST00000582448 ZNF136P52737 540 aa9.24□□□□□ -0.93
SS18-221ENST00000582448 PNLIPRP2P54317 469 aa9.24□□□□□ -0.93
SS18-221ENST00000582448 CXCR4P61073 352 aa9.24□□□□□ -0.93
SS18-221ENST00000582448 ISL1P61371 349 aa9.24□□□□□ -0.93
SS18-221ENST00000582448 HOXC5Q00444 222 aa9.24□□□□□ -0.93
SS18-221ENST00000582448 EFR3AQ14156 821 aa9.24□□□□□ -0.93
SS18-221ENST00000582448 SEC23BQ15437 767 aa9.24□□□□□ -0.93
SS18-221ENST00000582448 C1orf94Q6P1W5 598 aa9.24□□□□□ -0.93
SS18-221ENST00000582448 ULK3Q6PHR2 472 aa9.24□□□□□ -0.93
SS18-221ENST00000582448 KLHL17Q6TDP4 642 aa9.24□□□□□ -0.93
SS18-221ENST00000582448 C9orf40Q8IXQ3 194 aa9.24□□□□□ -0.93
SS18-221ENST00000582448 TMCO5AQ8N6Q1 288 aa9.24□□□□□ -0.93
SS18-221ENST00000582448 ZNF321PQ8N8H1 164 aa9.24□□□□□ -0.93
SS18-221ENST00000582448 TMEM178AQ8NBL3 297 aa9.24□□□□□ -0.93
SS18-221ENST00000582448 BPIFB6Q8NFQ5 453 aa9.24□□□□□ -0.93
SS18-221ENST00000582448 OR8K3Q8NH51 312 aa9.24□□□□□ -0.93
SS18-221ENST00000582448 TEX47Q8TBZ9 253 aa9.24□□□□□ -0.93
SS18-221ENST00000582448 CNOT9Q92600 299 aaKnown RBP9.24□□□□□ -0.93
SS18-221ENST00000582448 NRGNQ92686 78 aa9.24□□□□□ -0.93
SS18-221ENST00000582448 ADIPOR1Q96A54 375 aa9.24□□□□□ -0.93
SS18-221ENST00000582448 Q96MT0 163 aa9.24□□□□□ -0.93
SS18-221ENST00000582448 ADOQ96SZ5 270 aa9.24□□□□□ -0.93
SS18-221ENST00000582448 WFDC6Q9BQY6 131 aa9.24□□□□□ -0.93
SS18-221ENST00000582448 FUZQ9BT04 418 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms