RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 CLDN22Q8N7P3 220 aa12.13□□□□□ -0.47
CSNK1D-220ENST00000581737 ZNF540Q8NDQ6 660 aa12.13□□□□□ -0.47
CSNK1D-220ENST00000581737 BPIFB6Q8NFQ5 453 aa12.13□□□□□ -0.47
CSNK1D-220ENST00000581737 OR52L1Q8NGH7 329 aa12.13□□□□□ -0.47
CSNK1D-220ENST00000581737 SLC25A43Q8WUT9 341 aaPredicted RBP12.13□□□□□ -0.47
CSNK1D-220ENST00000581737 DNAJA4Q8WW22 397 aaPredicted RBP12.13□□□□□ -0.47
CSNK1D-220ENST00000581737 FCGR1BQ92637 280 aa12.13□□□□□ -0.47
CSNK1D-220ENST00000581737 OSTF1Q92882 214 aa12.13□□□□□ -0.47
CSNK1D-220ENST00000581737 TIMP4Q99727 224 aa12.13□□□□□ -0.47
CSNK1D-220ENST00000581737 FUZQ9BT04 418 aa12.13□□□□□ -0.47
CSNK1D-220ENST00000581737 PRDM14Q9GZV8 571 aa12.13□□□□□ -0.47
CSNK1D-220ENST00000581737 PLCXD1Q9NUJ7 323 aa12.13□□□□□ -0.47
CSNK1D-220ENST00000581737 ITGB1BP2Q9UKP3 347 aa12.13□□□□□ -0.47
CSNK1D-220ENST00000581737 CAMK2AQ9UQM7 478 aa12.13□□□□□ -0.47
CSNK1D-220ENST00000581737 CHST2Q9Y4C5 530 aa12.13□□□□□ -0.47
CSNK1D-220ENST00000581737 TRGV8A0A0C4DH27 118 aa12.12□□□□□ -0.47
CSNK1D-220ENST00000581737 A0A1B0GUH1 482 aa12.12□□□□□ -0.47
CSNK1D-220ENST00000581737 EFCAB10A6NFE3 127 aa12.12□□□□□ -0.47
CSNK1D-220ENST00000581737 AHRRA9YTQ3 701 aa12.12□□□□□ -0.47
CSNK1D-220ENST00000581737 RGS10O43665 173 aa12.12□□□□□ -0.47
CSNK1D-220ENST00000581737 CHP2O43745 196 aa12.12□□□□□ -0.47
CSNK1D-220ENST00000581737 GKN3PP0CG01 181 aa12.12□□□□□ -0.47
CSNK1D-220ENST00000581737 POU2F1P14859 743 aa12.12□□□□□ -0.47
CSNK1D-220ENST00000581737 ZNF708P17019 499 aa12.12□□□□□ -0.47
CSNK1D-220ENST00000581737 ACAA2P42765 397 aaKnown RBP12.12□□□□□ -0.47
CSNK1D-220ENST00000581737 CA7P43166 264 aa12.12□□□□□ -0.47
CSNK1D-220ENST00000581737 ALDH3B2P48448 385 aa12.12□□□□□ -0.47
CSNK1D-220ENST00000581737 LHX2P50458 406 aa12.12□□□□□ -0.47
CSNK1D-220ENST00000581737 POLR2HP52434 150 aaKnown RBP12.12□□□□□ -0.47
CSNK1D-220ENST00000581737 MAP2K6P52564 334 aa12.12□□□□□ -0.47
CSNK1D-220ENST00000581737 KRTAP10-9P60411 292 aa12.12□□□□□ -0.47
CSNK1D-220ENST00000581737 RAC1P63000 192 aa12.12□□□□□ -0.47
CSNK1D-220ENST00000581737 PTGES3Q15185 160 aaKnown RBP12.12□□□□□ -0.47
CSNK1D-220ENST00000581737 SEC23BQ15437 767 aa12.12□□□□□ -0.47
CSNK1D-220ENST00000581737 OR1Q1Q15612 314 aa12.12□□□□□ -0.47
CSNK1D-220ENST00000581737 ZBED5Q49AG3 693 aa12.12□□□□□ -0.47
CSNK1D-220ENST00000581737 PDSS1Q5T2R2 415 aa12.12□□□□□ -0.47
CSNK1D-220ENST00000581737 SLX4IPQ5VYV7 408 aa12.12□□□□□ -0.47
CSNK1D-220ENST00000581737 ANKRD34AQ69YU3 496 aa12.12□□□□□ -0.47
CSNK1D-220ENST00000581737 C3orf33Q6P1S2 294 aa12.12□□□□□ -0.47
CSNK1D-220ENST00000581737 MTFR2Q6P444 385 aa12.12□□□□□ -0.47
CSNK1D-220ENST00000581737 RASSF6Q6ZTQ3 369 aa12.12□□□□□ -0.47
CSNK1D-220ENST00000581737 PTCHD4Q6ZW05 846 aa12.12□□□□□ -0.47
CSNK1D-220ENST00000581737 GDF7Q7Z4P5 450 aa12.12□□□□□ -0.47
CSNK1D-220ENST00000581737 CADM2Q8N3J6 435 aa12.12□□□□□ -0.47
CSNK1D-220ENST00000581737 OR8J1Q8NGP2 316 aa12.12□□□□□ -0.47
CSNK1D-220ENST00000581737 OR5M1Q8NGP8 315 aa12.12□□□□□ -0.47
CSNK1D-220ENST00000581737 RNF217Q8TC41 542 aa12.12□□□□□ -0.47
CSNK1D-220ENST00000581737 POC1BQ8TC44 478 aa12.12□□□□□ -0.47
CSNK1D-220ENST00000581737 ITLN2Q8WWU7 325 aaPredicted RBP12.12□□□□□ -0.47
CSNK1D-220ENST00000581737 SMPDL3BQ92485 455 aa12.12□□□□□ -0.47
CSNK1D-220ENST00000581737 DGCR14Q96DF8 476 aaKnown RBP12.12□□□□□ -0.47
CSNK1D-220ENST00000581737 PLEKHA8Q96JA3 519 aa12.12□□□□□ -0.47
CSNK1D-220ENST00000581737 KLHDC3Q9BQ90 382 aa12.12□□□□□ -0.47
CSNK1D-220ENST00000581737 CCDC90BQ9GZT6 254 aa12.12□□□□□ -0.47
CSNK1D-220ENST00000581737 SLC25A19Q9HC21 320 aa12.12□□□□□ -0.47
CSNK1D-220ENST00000581737 MAN2C1Q9NTJ4 1040 aa12.12□□□□□ -0.47
CSNK1D-220ENST00000581737 SLC7A7Q9UM01 511 aa12.12□□□□□ -0.47
CSNK1D-220ENST00000581737 MED31Q9Y3C7 131 aa12.12□□□□□ -0.47
CSNK1D-220ENST00000581737 ZNF337Q9Y3M9 751 aa12.12□□□□□ -0.47
CSNK1D-220ENST00000581737 PCDHGB5Q9Y5G0 923 aa12.12□□□□□ -0.47
CSNK1D-220ENST00000581737 ZNF469Q96JG9 3925 aaPredicted RBP12.12□□□□□ -0.47
CSNK1D-220ENST00000581737 ITPR3Q14573 2671 aa12.11□□□□□ -0.47
CSNK1D-220ENST00000581737 A0A087WUU8 490 aa12.11□□□□□ -0.47
CSNK1D-220ENST00000581737 SHISA8B8ZZ34 492 aa12.11□□□□□ -0.47
CSNK1D-220ENST00000581737 E9PQ18 207 aa12.11□□□□□ -0.47
CSNK1D-220ENST00000581737 ZNF701M0R085 212 aaPredicted RBP12.11□□□□□ -0.47
CSNK1D-220ENST00000581737 FRS3O43559 492 aa12.11□□□□□ -0.47
CSNK1D-220ENST00000581737 TPST2O60704 377 aa12.11□□□□□ -0.47
CSNK1D-220ENST00000581737 ADAM11O75078 769 aa12.11□□□□□ -0.47
CSNK1D-220ENST00000581737 PRG2P13727 222 aa12.11□□□□□ -0.47
CSNK1D-220ENST00000581737 JUNBP17275 347 aaPredicted RBP12.11□□□□□ -0.47
CSNK1D-220ENST00000581737 ACVR2AP27037 513 aa12.11□□□□□ -0.47
CSNK1D-220ENST00000581737 POLR2IP36954 125 aaKnown RBP12.11□□□□□ -0.47
CSNK1D-220ENST00000581737 GSSP48637 474 aa12.11□□□□□ -0.47
CSNK1D-220ENST00000581737 ZNF136P52737 540 aa12.11□□□□□ -0.47
CSNK1D-220ENST00000581737 PER3P56645 1201 aa12.11□□□□□ -0.47
CSNK1D-220ENST00000581737 CLDN18P56856 261 aa12.11□□□□□ -0.47
CSNK1D-220ENST00000581737 RPS3AP61247 264 aaKnown RBP12.11□□□□□ -0.47
CSNK1D-220ENST00000581737 C3AR1Q16581 482 aa12.11□□□□□ -0.47
CSNK1D-220ENST00000581737 CTU2Q2VPK5 515 aaKnown RBP12.11□□□□□ -0.47
CSNK1D-220ENST00000581737 GXYLT1Q4G148 440 aa12.11□□□□□ -0.47
CSNK1D-220ENST00000581737 ZNF585AQ6P3V2 769 aa12.11□□□□□ -0.47
CSNK1D-220ENST00000581737 ULK3Q6PHR2 472 aa12.11□□□□□ -0.47
CSNK1D-220ENST00000581737 ESPNLQ6ZVH7 1005 aa12.11□□□□□ -0.47
CSNK1D-220ENST00000581737 KCTD8Q6ZWB6 473 aa12.11□□□□□ -0.47
CSNK1D-220ENST00000581737 CHMP1BQ7LBR1 199 aa12.11□□□□□ -0.47
CSNK1D-220ENST00000581737 SATL1Q86VE3 508 aa12.11□□□□□ -0.47
CSNK1D-220ENST00000581737 ENTHD1Q8IYW4 607 aa12.11□□□□□ -0.47
CSNK1D-220ENST00000581737 LSMEM1Q8N8F7 131 aa12.11□□□□□ -0.47
CSNK1D-220ENST00000581737 OR5M9Q8NGP3 310 aa12.11□□□□□ -0.47
CSNK1D-220ENST00000581737 RHOXF1Q8NHV9 184 aa12.11□□□□□ -0.47
CSNK1D-220ENST00000581737 ZNF420Q8TAQ5 688 aaPredicted RBP12.11□□□□□ -0.47
CSNK1D-220ENST00000581737 CNIH3Q8TBE1 160 aa12.11□□□□□ -0.47
CSNK1D-220ENST00000581737 TMEM239Q8WW34 195 aa12.11□□□□□ -0.47
CSNK1D-220ENST00000581737 WDYHV1Q96HA8 205 aa12.11□□□□□ -0.47
CSNK1D-220ENST00000581737 KLHL15Q96M94 604 aa12.11□□□□□ -0.47
CSNK1D-220ENST00000581737 C12orf10Q9HB07 376 aa12.11□□□□□ -0.47
CSNK1D-220ENST00000581737 CTPS2Q9NRF8 586 aa12.11□□□□□ -0.47
CSNK1D-220ENST00000581737 RASSF1Q9NS23 344 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms