RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 LTBQ06643 244 aa12.77□□□□□ -0.37
SKA2-205ENST00000580541 RFX4Q33E94 735 aa12.77□□□□□ -0.37
SKA2-205ENST00000580541 EMC4Q5J8M3 183 aa12.77□□□□□ -0.37
SKA2-205ENST00000580541 RASSF6Q6ZTQ3 369 aa12.77□□□□□ -0.37
SKA2-205ENST00000580541 SLC46A3Q7Z3Q1 461 aa12.77□□□□□ -0.37
SKA2-205ENST00000580541 HDDC2Q7Z4H3 204 aa12.77□□□□□ -0.37
SKA2-205ENST00000580541 TMEM179BQ7Z7N9 219 aa12.77□□□□□ -0.37
SKA2-205ENST00000580541 ANKK1Q8NFD2 765 aa12.77□□□□□ -0.37
SKA2-205ENST00000580541 FNDC9Q8TBE3 224 aa12.77□□□□□ -0.37
SKA2-205ENST00000580541 ROBO4Q8WZ75 1007 aa12.77□□□□□ -0.37
SKA2-205ENST00000580541 GTPBP3Q969Y2 492 aaKnown RBP12.77□□□□□ -0.37
SKA2-205ENST00000580541 DNAJA3Q96EY1 480 aa12.77□□□□□ -0.37
SKA2-205ENST00000580541 ZNF845Q96IR2 970 aaPredicted RBP12.77□□□□□ -0.37
SKA2-205ENST00000580541 SRXN1Q9BYN0 137 aa12.77□□□□□ -0.37
SKA2-205ENST00000580541 GABARAPL1Q9H0R8 117 aa12.77□□□□□ -0.37
SKA2-205ENST00000580541 RNF122Q9H9V4 155 aa12.77□□□□□ -0.37
SKA2-205ENST00000580541 PARPBPQ9NWS1 579 aa12.77□□□□□ -0.37
SKA2-205ENST00000580541 CLCF1Q9UBD9 225 aa12.77□□□□□ -0.37
SKA2-205ENST00000580541 OSGIN2Q9Y236 505 aa12.77□□□□□ -0.37
SKA2-205ENST00000580541 POFUT2Q9Y2G5 429 aa12.77□□□□□ -0.37
SKA2-205ENST00000580541 HIF3AQ9Y2N7 669 aa12.77□□□□□ -0.37
SKA2-205ENST00000580541 KMT2BQ9UMN6 2715 aaPredicted RBP12.76□□□□□ -0.37
SKA2-205ENST00000580541 A0A1W2PNV4 684 aa12.76□□□□□ -0.37
SKA2-205ENST00000580541 A0A1W2PRG6 482 aa12.76□□□□□ -0.37
SKA2-205ENST00000580541 SAC3D1A6NKF1 404 aa12.76□□□□□ -0.37
SKA2-205ENST00000580541 SMAD9O15198 467 aaKnown RBP12.76□□□□□ -0.37
SKA2-205ENST00000580541 KLF4O43474 513 aa12.76□□□□□ -0.37
SKA2-205ENST00000580541 PTP4A3O75365 173 aa12.76□□□□□ -0.37
SKA2-205ENST00000580541 NDUFB2O95178 105 aa12.76□□□□□ -0.37
SKA2-205ENST00000580541 YES1P07947 543 aa12.76□□□□□ -0.37
SKA2-205ENST00000580541 RPL4P36578 427 aaKnown RBP12.76□□□□□ -0.37
SKA2-205ENST00000580541 RAD23AP54725 363 aa12.76□□□□□ -0.37
SKA2-205ENST00000580541 LAPTM4AQ15012 233 aa12.76□□□□□ -0.37
SKA2-205ENST00000580541 POU4F3Q15319 338 aa12.76□□□□□ -0.37
SKA2-205ENST00000580541 TRIP10Q15642 601 aa12.76□□□□□ -0.37
SKA2-205ENST00000580541 ALG10Q5BKT4 473 aa12.76□□□□□ -0.37
SKA2-205ENST00000580541 TMEM201Q5SNT2 666 aa12.76□□□□□ -0.37
SKA2-205ENST00000580541 FAHD1Q6P587 224 aa12.76□□□□□ -0.37
SKA2-205ENST00000580541 SMARCD3Q6STE5 483 aa12.76□□□□□ -0.37
SKA2-205ENST00000580541 RPTNQ6XPR3 784 aa12.76□□□□□ -0.37
SKA2-205ENST00000580541 GPAT4Q86UL3 456 aa12.76□□□□□ -0.37
SKA2-205ENST00000580541 UEVLDQ8IX04 471 aa12.76□□□□□ -0.37
SKA2-205ENST00000580541 LRRC17Q8N6Y2 441 aa12.76□□□□□ -0.37
SKA2-205ENST00000580541 CLDN22Q8N7P3 220 aa12.76□□□□□ -0.37
SKA2-205ENST00000580541 OR52L1Q8NGH7 329 aa12.76□□□□□ -0.37
SKA2-205ENST00000580541 OR51A7Q8NH64 312 aa12.76□□□□□ -0.37
SKA2-205ENST00000580541 RNF128Q8TEB7 428 aa12.76□□□□□ -0.37
SKA2-205ENST00000580541 GMPPAQ96IJ6 420 aaPredicted RBP12.76□□□□□ -0.37
SKA2-205ENST00000580541 TNFRSF13CQ96RJ3 184 aa12.76□□□□□ -0.37
SKA2-205ENST00000580541 CIB1Q99828 191 aa12.76□□□□□ -0.37
SKA2-205ENST00000580541 FANCFQ9NPI8 374 aa12.76□□□□□ -0.37
SKA2-205ENST00000580541 PAPOLBQ9NRJ5 636 aaKnown RBP12.76□□□□□ -0.37
SKA2-205ENST00000580541 KRT84Q9NSB2 600 aa12.76□□□□□ -0.37
SKA2-205ENST00000580541 MBD3L4A6NDZ8 208 aaPredicted RBP12.75□□□□□ -0.37
SKA2-205ENST00000580541 MBD3L3A6NE82 208 aaPredicted RBP12.75□□□□□ -0.37
SKA2-205ENST00000580541 MBD3L5A6NJ08 208 aaPredicted RBP12.75□□□□□ -0.37
SKA2-205ENST00000580541 HSPB2A8KAH6 182 aa12.75□□□□□ -0.37
SKA2-205ENST00000580541 ZNF724A8MTY0 619 aa12.75□□□□□ -0.37
SKA2-205ENST00000580541 LRRN3E7EW58 273 aa12.75□□□□□ -0.37
SKA2-205ENST00000580541 MS4A18H0YCH9 400 aa12.75□□□□□ -0.37
SKA2-205ENST00000580541 CDC42EP2O14613 210 aa12.75□□□□□ -0.37
SKA2-205ENST00000580541 IDH3BO43837 385 aa12.75□□□□□ -0.37
SKA2-205ENST00000580541 ATP6V1G2O95670 118 aa12.75□□□□□ -0.37
SKA2-205ENST00000580541 HPRP00739 348 aa12.75□□□□□ -0.37
SKA2-205ENST00000580541 TSPAN19P0C672 248 aa12.75□□□□□ -0.37
SKA2-205ENST00000580541 OSMP13725 252 aa12.75□□□□□ -0.37
SKA2-205ENST00000580541 IGFBP5P24593 272 aa12.75□□□□□ -0.37
SKA2-205ENST00000580541 SLC6A6P31641 620 aa12.75□□□□□ -0.37
SKA2-205ENST00000580541 DAP3P51398 398 aaKnown RBP12.75□□□□□ -0.37
SKA2-205ENST00000580541 ALDH3A2P51648 485 aa12.75□□□□□ -0.37
SKA2-205ENST00000580541 SLC16A1P53985 500 aa12.75□□□□□ -0.37
SKA2-205ENST00000580541 ESRRGP62508 458 aa12.75□□□□□ -0.37
SKA2-205ENST00000580541 LSM11P83369 360 aaKnown RBP eCLIP12.75□□□□□ -0.37
SKA2-205ENST00000580541 DAG1Q14118 895 aa12.75□□□□□ -0.37
SKA2-205ENST00000580541 HSPB2Q16082 182 aa12.75□□□□□ -0.37
SKA2-205ENST00000580541 MS4A18Q3C1V0 323 aa12.75□□□□□ -0.37
SKA2-205ENST00000580541 DPY19L2P2Q6ZN68 376 aa12.75□□□□□ -0.37
SKA2-205ENST00000580541 CCDC103Q8IW40 242 aa12.75□□□□□ -0.37
SKA2-205ENST00000580541 PARP8Q8N3A8 854 aa12.75□□□□□ -0.37
SKA2-205ENST00000580541 PACRGLQ8N7B6 248 aa12.75□□□□□ -0.37
SKA2-205ENST00000580541 MBD3L2Q8NHZ7 208 aaPredicted RBP12.75□□□□□ -0.37
SKA2-205ENST00000580541 PRR7Q8TB68 274 aa12.75□□□□□ -0.37
SKA2-205ENST00000580541 MAGEE2Q8TD90 523 aaPredicted RBP12.75□□□□□ -0.37
SKA2-205ENST00000580541 RND1Q92730 232 aa12.75□□□□□ -0.37
SKA2-205ENST00000580541 TTYH2Q9BSA4 534 aa12.75□□□□□ -0.37
SKA2-205ENST00000580541 INIPQ9NRY2 104 aa12.75□□□□□ -0.37
SKA2-205ENST00000580541 TAS2R5Q9NYW4 299 aa12.75□□□□□ -0.37
SKA2-205ENST00000580541 IL20Q9NYY1 176 aa12.75□□□□□ -0.37
SKA2-205ENST00000580541 USE1Q9NZ43 259 aa12.75□□□□□ -0.37
SKA2-205ENST00000580541 TINAGQ9UJW2 476 aa12.75□□□□□ -0.37
SKA2-205ENST00000580541 BAIAP2Q9UQB8 552 aa12.75□□□□□ -0.37
SKA2-205ENST00000580541 SIGLEC7Q9Y286 467 aa12.75□□□□□ -0.37
SKA2-205ENST00000580541 EMC9Q9Y3B6 208 aa12.75□□□□□ -0.37
SKA2-205ENST00000580541 IGKV3D-15A0A087WSY6 115 aa12.74□□□□□ -0.37
SKA2-205ENST00000580541 TRAV27A0A087WT01 109 aa12.74□□□□□ -0.37
SKA2-205ENST00000580541 IGHV3-15A0A0B4J1V0 119 aa12.74□□□□□ -0.37
SKA2-205ENST00000580541 OR6C65A6NJZ3 312 aa12.74□□□□□ -0.37
SKA2-205ENST00000580541 ZNF726A6NNF4 738 aa12.74□□□□□ -0.37
SKA2-205ENST00000580541 C11orf98E9PRG8 122 aa12.74□□□□□ -0.37
SKA2-205ENST00000580541 H3BN98 237 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms