RNA–Protein interactions for RNA: ENST00000580170.5

PTPRM-211, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRM, Length 5,941 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-211ENST00000580170 PRKRAO75569 313 aaKnown RBP19.81■□□□□ 0.76
PTPRM-211ENST00000580170 OR2T7P0C7T2 308 aa19.81■□□□□ 0.76
PTPRM-211ENST00000580170 FAM122BQ7Z309 247 aa19.81■□□□□ 0.76
PTPRM-211ENST00000580170 PTRH1Q86Y79 214 aaKnown RBP19.81■□□□□ 0.76
PTPRM-211ENST00000580170 OR2T27Q8NH04 317 aa19.81■□□□□ 0.76
PTPRM-211ENST00000580170 MAP3K3Q99759 626 aa19.81■□□□□ 0.76
PTPRM-211ENST00000580170 NOX4Q9NPH5 578 aa19.81■□□□□ 0.76
PTPRM-211ENST00000580170 MOKQ9UQ07 419 aa19.81■□□□□ 0.76
PTPRM-211ENST00000580170 SMLR1H3BR10 107 aa19.81■□□□□ 0.76
PTPRM-211ENST00000580170 ARG2P78540 354 aa19.81■□□□□ 0.76
PTPRM-211ENST00000580170 BCDIN3DQ7Z5W3 292 aaKnown RBP19.81■□□□□ 0.76
PTPRM-211ENST00000580170 ZNF808Q8N4W9 903 aaPredicted RBP19.81■□□□□ 0.76
PTPRM-211ENST00000580170 CLDN22Q8N7P3 220 aa19.81■□□□□ 0.76
PTPRM-211ENST00000580170 LRIT1Q9P2V4 623 aa19.81■□□□□ 0.76
PTPRM-211ENST00000580170 REEP5Q00765 189 aa19.81■□□□□ 0.76
PTPRM-211ENST00000580170 OR6V1Q8N148 313 aa19.81■□□□□ 0.76
PTPRM-211ENST00000580170 ULBP2Q9BZM5 246 aa19.81■□□□□ 0.76
PTPRM-211ENST00000580170 ZNF286AQ9HBT8 521 aa19.81■□□□□ 0.76
PTPRM-211ENST00000580170 UFSP2Q9NUQ7 469 aa19.81■□□□□ 0.76
PTPRM-211ENST00000580170 UBR2Q8IWV8 1755 aa19.81■□□□□ 0.76
PTPRM-211ENST00000580170 MRPL43Q8N983 215 aaKnown RBP19.81■□□□□ 0.76
PTPRM-211ENST00000580170 MCOLN1Q9GZU1 580 aa19.81■□□□□ 0.76
PTPRM-211ENST00000580170 SAGE1Q9NXZ1 904 aa19.81■□□□□ 0.76
PTPRM-211ENST00000580170 ZFAND5O76080 213 aa19.8■□□□□ 0.76
PTPRM-211ENST00000580170 TXNDC12O95881 172 aa19.8■□□□□ 0.76
PTPRM-211ENST00000580170 TACR3P29371 465 aa19.8■□□□□ 0.76
PTPRM-211ENST00000580170 PCBD1P61457 104 aa19.8■□□□□ 0.76
PTPRM-211ENST00000580170 TMEM255BQ8WV15 326 aa19.8■□□□□ 0.76
PTPRM-211ENST00000580170 TCTN2Q96GX1 697 aa19.8■□□□□ 0.76
PTPRM-211ENST00000580170 CXCL16Q9H2A7 254 aa19.8■□□□□ 0.76
PTPRM-211ENST00000580170 GOLGA4Q13439 2230 aaKnown RBP19.8■□□□□ 0.76
PTPRM-211ENST00000580170 CEBPZOSA8MTT3 80 aa19.8■□□□□ 0.76
PTPRM-211ENST00000580170 SOCS6O14544 535 aa19.8■□□□□ 0.76
PTPRM-211ENST00000580170 GPR137BO60478 399 aa19.8■□□□□ 0.76
PTPRM-211ENST00000580170 CD53P19397 219 aa19.8■□□□□ 0.76
PTPRM-211ENST00000580170 HTR2CP28335 458 aa19.8■□□□□ 0.76
PTPRM-211ENST00000580170 FAM111BQ6SJ93 734 aa19.8■□□□□ 0.76
PTPRM-211ENST00000580170 TM4SF18Q96CE8 201 aa19.8■□□□□ 0.76
PTPRM-211ENST00000580170 DNMT3BQ9UBC3 853 aaKnown RBP19.8■□□□□ 0.76
PTPRM-211ENST00000580170 TOPAZ1Q8N9V7 1692 aa19.8■□□□□ 0.76
PTPRM-211ENST00000580170 A0A0B4J2A0 478 aa19.8■□□□□ 0.76
PTPRM-211ENST00000580170 FCGR2AP12318 317 aa19.8■□□□□ 0.76
PTPRM-211ENST00000580170 TMEM200AQ86VY9 491 aa19.8■□□□□ 0.76
PTPRM-211ENST00000580170 MMP21Q8N119 569 aa19.8■□□□□ 0.76
PTPRM-211ENST00000580170 RHBDD1Q8TEB9 315 aa19.8■□□□□ 0.76
PTPRM-211ENST00000580170 SHPKQ9UHJ6 478 aa19.8■□□□□ 0.76
PTPRM-211ENST00000580170 ADAM23O75077 832 aa19.8■□□□□ 0.76
PTPRM-211ENST00000580170 SLC43A1O75387 559 aa19.8■□□□□ 0.76
PTPRM-211ENST00000580170 ITGB2P05107 769 aa19.8■□□□□ 0.76
PTPRM-211ENST00000580170 NUDT1P36639 197 aa19.8■□□□□ 0.76
PTPRM-211ENST00000580170 FCN2Q15485 313 aa19.8■□□□□ 0.76
PTPRM-211ENST00000580170 LPAL2Q16609 132 aa19.8■□□□□ 0.76
PTPRM-211ENST00000580170 ACTBL2Q562R1 376 aa19.8■□□□□ 0.76
PTPRM-211ENST00000580170 OR5L1Q8NGL2 311 aa19.8■□□□□ 0.76
PTPRM-211ENST00000580170 PSMB1P20618 241 aaKnown RBP19.8■□□□□ 0.76
PTPRM-211ENST00000580170 ARPC5LQ9BPX5 153 aa19.8■□□□□ 0.76
PTPRM-211ENST00000580170 AMBRA1Q9C0C7 1298 aa19.8■□□□□ 0.76
PTPRM-211ENST00000580170 SMCO4Q9NRQ5 59 aa19.8■□□□□ 0.76
PTPRM-211ENST00000580170 HS3ST2Q9Y278 367 aa19.8■□□□□ 0.76
PTPRM-211ENST00000580170 NWD2Q9ULI1 1742 aa19.79■□□□□ 0.76
PTPRM-211ENST00000580170 TPPPO94811 219 aa19.79■□□□□ 0.76
PTPRM-211ENST00000580170 PRICKLE2Q7Z3G6 844 aa19.79■□□□□ 0.76
PTPRM-211ENST00000580170 BPHLQ86WA6 291 aaPredicted RBP19.79■□□□□ 0.76
PTPRM-211ENST00000580170 C19orf47Q8N9M1 422 aaKnown RBP19.79■□□□□ 0.76
PTPRM-211ENST00000580170 PSD2Q9BQI7 771 aa19.79■□□□□ 0.76
PTPRM-211ENST00000580170 A0A1W2PPV4 95 aa19.79■□□□□ 0.76
PTPRM-211ENST00000580170 SERINC4A6NH21 518 aa19.79■□□□□ 0.76
PTPRM-211ENST00000580170 CR2P20023 1033 aa19.79■□□□□ 0.76
PTPRM-211ENST00000580170 ARRDC3Q96B67 414 aa19.79■□□□□ 0.76
PTPRM-211ENST00000580170 MS4A8Q9BY19 250 aa19.79■□□□□ 0.76
PTPRM-211ENST00000580170 MED16Q9Y2X0 877 aa19.79■□□□□ 0.76
PTPRM-211ENST00000580170 ZNF780AO75290 641 aaPredicted RBP19.79■□□□□ 0.76
PTPRM-211ENST00000580170 HTR1FP30939 366 aa19.79■□□□□ 0.76
PTPRM-211ENST00000580170 DDOSTP39656 456 aa19.79■□□□□ 0.76
PTPRM-211ENST00000580170 TNFRSF4P43489 277 aa19.79■□□□□ 0.76
PTPRM-211ENST00000580170 NMNAT3Q96T66 252 aa19.79■□□□□ 0.76
PTPRM-211ENST00000580170 MAGEB4O15481 346 aaPredicted RBP19.79■□□□□ 0.76
PTPRM-211ENST00000580170 GALR3O60755 368 aaPredicted RBP19.79■□□□□ 0.76
PTPRM-211ENST00000580170 PIGAP37287 484 aa19.79■□□□□ 0.76
PTPRM-211ENST00000580170 ZC3HAV1Q7Z2W4 902 aaKnown RBP19.79■□□□□ 0.76
PTPRM-211ENST00000580170 KDM8Q8N371 416 aa19.79■□□□□ 0.76
PTPRM-211ENST00000580170 ZNF610Q8N9Z0 462 aa19.79■□□□□ 0.76
PTPRM-211ENST00000580170 OR14A16Q8NHC5 309 aa19.79■□□□□ 0.76
PTPRM-211ENST00000580170 EMC7Q9NPA0 242 aa19.79■□□□□ 0.76
PTPRM-211ENST00000580170 APEX1P27695 318 aaKnown RBP19.78■□□□□ 0.76
PTPRM-211ENST00000580170 FOXK2Q01167 660 aa19.78■□□□□ 0.76
PTPRM-211ENST00000580170 ESPNLQ6ZVH7 1005 aa19.78■□□□□ 0.76
PTPRM-211ENST00000580170 RTL10Q7L3V2 364 aa19.78■□□□□ 0.76
PTPRM-211ENST00000580170 TAAR8Q969N4 342 aa19.78■□□□□ 0.76
PTPRM-211ENST00000580170 D6RAR5 112 aa19.78■□□□□ 0.76
PTPRM-211ENST00000580170 SLC16A6O15403 523 aa19.78■□□□□ 0.76
PTPRM-211ENST00000580170 HOXA9P31269 272 aa19.78■□□□□ 0.76
PTPRM-211ENST00000580170 PLA2G7Q13093 441 aa19.78■□□□□ 0.76
PTPRM-211ENST00000580170 GAREM2Q75VX8 874 aa19.78■□□□□ 0.76
PTPRM-211ENST00000580170 LYSMD2Q8IV50 215 aa19.78■□□□□ 0.76
PTPRM-211ENST00000580170 OR56B1Q8NGI3 324 aa19.78■□□□□ 0.76
PTPRM-211ENST00000580170 NEURL3Q96EH8 262 aa19.78■□□□□ 0.76
PTPRM-211ENST00000580170 FBXO7Q9Y3I1 522 aa19.78■□□□□ 0.76
PTPRM-211ENST00000580170 TCRBV5S1A1TA0A578 114 aa19.78■□□□□ 0.76
PTPRM-211ENST00000580170 EDIL3O43854 480 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms